KEGG   Cucurbita maxima (winter squash): 111492703
Entry
111492703         CDS       T05246                                 
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase SSU72
  KO
K15544  RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
Organism
cmax  Cucurbita maxima (winter squash)
Pathway
cmax03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cmax00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    111492703
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cmax03021]
    111492703
   03019 Messenger RNA biogenesis [BR:cmax03019]
    111492703
Enzymes [BR:cmax01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     111492703
Transcription machinery [BR:cmax03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     111492703
Messenger RNA biogenesis [BR:cmax03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     111492703
SSDB
Motif
Pfam: Ssu72
Other DBs
NCBI-GeneID: 111492703
NCBI-ProteinID: XP_022997876
UniProt: A0A6J1K8Q5
LinkDB
Position
Unknown
AA seq 193 aa
MKYRYAMVCSSNQNRSMEAHSILKSKGFNVSSYGTGAHVKLPGPSLREPNVYDFGTPYKH
MFDDLRRKDPELYKRNGILPMLKRNAAVKTAPQRWQDNAADGFFDVVFTFEEKVFDMVIE
DLNTRDHALMKTVLIVNLEVKDNHEEAAIGARLTFNLCQEIERAESWEDTIDDIVIAFEK
HQRRKLLYSISFY
NT seq 582 nt   +upstreamnt  +downstreamnt
atgaagtatcgttatgcaatggtttgttcatccaaccagaatcgaagcatggaggctcac
tctatcctcaaaagcaagggcttcaatgtttcatcctatggaactggggctcacgtcaag
cttcctggaccttctctccgagaacccaatgtatacgattttggtactccctacaagcac
atgttcgatgatctccgccgaaaagatcctgaactatacaagcgtaatggcattctgcct
atgcttaagagaaacgcagcagtcaaaacggctcctcaacgttggcaagataatgcagca
gacggtttctttgatgtggtatttacttttgaagaaaaggtctttgatatggttattgaa
gatctcaacacacgtgatcatgcactgatgaaaactgtactgattgtgaacttggaggta
aaagataaccacgaggaggcagctataggagcacggcttacttttaatctttgccaggag
attgaacgggctgaatcatgggaagatacgattgatgatatcgtgattgccttcgagaag
catcaaagaagaaagctgttgtatagcatttccttttactga

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