Cucurbita maxima (winter squash): 111492952
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Entry
111492952 CDS
T05246
Name
(RefSeq) sister chromatid cohesion protein SCC2 isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
cmax
Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmax03036
]
111492952
Chromosome and associated proteins [BR:
cmax03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
111492952
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
PHD
PHD_2
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
111492952
NCBI-ProteinID:
XP_022998260
UniProt:
A0A6J1KC20
LinkDB
All DBs
Position
Unknown
AA seq
1830 aa
AA seq
DB search
MSLPPFASASASGSGLRGIGLSNTIHSEVAPCLPLPSLPVSFGASEPELRLFDEPAGSYA
TLRSDVLAQSKKIADLLRATDVSYLNLREDAKVLPEGSVEPFELYEEVLRYDVDAFKYIT
PGPIMEHVSSSMVSDRKVFEQKLPIRSQVEGESRTIQNHKPESMPTNDAPISSSRKVKVK
KKGRDEMSSVRTDSSELQDTTLANFCKFLEDFCGRAEIISDDRDESEWLALPLTDLRVLV
NEIMSIRSKKLLHLVSLDSLTRLLKVLDHQIHRAEGLSVEECEHLDSDAVATIFCALESI
HASLAVMAHDQMPKLLYKEEIIERILEFSRHHIMDIMCAYDPSYRALHKASENGVFEVNE
DEELDGDYGSSSKKRRGVKTSKIRKPTFNKVSTAVNTILQKMCTILGLLKDLLLIERLPD
SCILQLVKTSFSTFLVDNIQLLQLKAIGLICGIYYSYTQHRNYLIDELVQMLFKLPSTKR
ALRAYHLPDEEQRQIQMISALLIQLVHYSANLPEALRQASDSKSILEVSVDSSCPTKCHE
TATEACCLFWTRVLQRFANVKTQDASEVKVMMENMVLDLLTTLNLPEYPASAPILEVLCV
LLLQNAGLKSKDVSARSMAIDFLGMIAARLKRDAVICATDKFWILQELGNKEDVADESYP
KDVCSICLDGRVGKYFFVCQDCQRLFHADCIGGRENEVPNRSWYCQICHSRKQLQVLQSY
CKSQCKNDGEKSKDWSDKESKVSWLVTNIEIVQQLLLNYLQEVGSSDDVHLFVRWFYLCL
WYKDDSKAEQKFIYYLSRLKSMAIVRDGGNTSSLLTRDSVKKITLALGQNNSFSRGFDKI
LHMLLASLRENSPVIRAKALRAVSIIVEADPEVLGDKRVQLAVEGRFCDSAISVREAALE
LVGRHIASHPDLGFKYFDKIAERTKDTGVSVRKRAIKIIRDMCTSNANFSEFTRACIEII
SRVGDDESSIQDLVCKTFYEFWFEEPSGSQTQFFGDDSSVPLEIAKKTEQIVEILRKMPN
HQLLVTIIKRNLALDFFPQSTKAVGINPVSLTSVRKRCELMCKCLLERILQVEERSNMDT
EVRALPYVLVLHAFCVVDPMLCAPASNPSQFVVTLQPYLKTQVDNRVVAQLLESIIFIID
AVLPLLRKLSPNVSEDLEQDLKHMIVRHSFLTVVHACIKCLCSLSKVAGKGASVVGYLIQ
AFFKRLDSLGIDNKQNKLDEVGWYNVKTSIWIVKLQLLGRSLFCLGLLIRYGSPLLSNSS
NKNVDVTKSLSLLKKYLVTEDLVIRVRALQALGFVLIARPEFMLEEDVGKIVEEALSSGS
DVRLKMQALQNMYDYLLDAESQMGTDQPDDGAAPTAAVDGGPSVPVAAGAGDTNICGGIV
QFYWEKVLGRSLDLNGQVRQTALKIVEVVLRQGLVHPITCVPYLIALETDPHEANAKLAH
HLLMNMNEKYPTFFESRLGDGLQMSFMFIQTISRSDNANQKIQSKGSGNLKGRSDGSSLT
QARLGVSRIYKLIRGNRVSRNNFISSIVRKFDNPRLNDSMIPFLMYCAEILALLPFTFPD
EPLYLIHAINRIIQVRGGALQEEIKELGMHLVQRNPQNFHYENGMIQPQQPALFSGNIIL
SDMNGSVEHDQSRPFCDFTSMDLNQQIPPESVAHHELSNNNNTLEGKFHNICSVDQYSIS
KDDLQKIQTMSLAAIALQLLLKLKRHLKIMYSLNDARCQSFNPNEPPKPGEFLSKQNVPF
DISDTCTTLPTTYQEFMQRYQDFKSTLRDDAFDYSAYTVNIKRKRPTPRKGRKSTMGGED
EEEDEDWSGGRRLGSSGRKGSYSIRGSRQR
NT seq
5493 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgccgccgttcgcttctgcctctgcctctggctccggtctccgtggtatcggc
ttgtccaatactattcactccgaggttgctccttgcttgcctttgccttcgcttccggtt
tccttcggtgcttccgagcctgagcttcgactcttcgatgagccggctgggagctatgct
actttgaggagtgatgttctcgctcagtctaagaagatcgctgatctgcttcgtgctact
gacgtgtcttacttaaatctcagagaagatgccaaagttcttcctgaagggtctgtggag
ccttttgaactctatgaggaagttcttcgctatgatgttgatgccttcaagtatattact
ccaggtcctattatggagcacgtctctagcagtatggtatctgataggaaagtttttgag
caaaagctacctattagaagtcaggttgaaggagaatctagaacaattcaaaatcataag
cctgaatctatgccaactaatgatgcaccaatatcatcttctagaaaagtaaaagttaag
aagaaaggcagagatgaaatgtcttctgttagaacagattcttctgagcttcaagacacc
accctcgcaaacttttgcaagttcttagaggacttctgtggcagagctgaaattatcagt
gatgatcgtgatgaatcagagtggctggctctgcctcttactgatctaagagtgcttgtc
aatgaaataatgtccattcgttcaaagaaacttcttcatttggtttctctagatagcctg
acaaggctgttgaaggttttagatcatcagatacatagagcagaaggattgtctgttgaa
gaatgtgaacatttagattcagatgcagttgcaactatcttttgtgctttggagtccata
catgcatctcttgcagtaatggctcatgaccaaatgccaaagttgctttataaagaagag
atcatagagagaattctggagttctcccggcatcacataatggatattatgtgtgcttat
gatccttcatatcgtgcgttgcataaagccagtgaaaatggtgtgtttgaagtcaatgaa
gatgaagaacttgatggtgactatggttcatcgagtaagaagcgtcgtggtgttaagact
tctaaaatcaggaaacctacattcaacaaggtatctactgctgttaatactattcttcag
aagatgtgcaccattcttggtttacttaaggatttattgctgatagagaggttaccagat
agctgtattcttcaattagtgaaaacaagcttttctacttttttggtggacaatattcag
ctcttgcaacttaaggcaattggtttaatttgtgggatatattattcgtatacacaacat
cgtaattatttgatagatgaattagttcagatgctcttcaaattaccatccacgaagcgg
gctttaagagcgtatcacttacctgatgaagaacaacggcaaattcaaatgatttctgcc
ctattgattcaactggtacattatagtgcaaaccttcctgaagctttgaggcaagcatca
gacagtaaatccatccttgaagtttcagttgatagtagttgtcctaccaaatgccatgaa
acagctacggaggcatgctgtcttttctggactcgtgtactacagcgctttgctaatgtg
aagactcaggatgcatctgaagtgaaagtaatgatggaaaatatggttttggatctacta
acaacattaaatttacccgaatatcctgcatcagcccctattttggaggttctatgtgtg
ttattacttcagaatgctggactgaaatctaaagatgtctctgctcgttctatggccatt
gactttcttggcatgattgctgcaagattgaaacgtgatgctgtcatttgtgccacagac
aagttttggatattgcaagagttgggcaataaggaggatgttgctgatgagagttatcct
aaagatgtctgttctatatgcttggatggcagggtaggaaagtatttctttgtctgtcaa
gattgccagaggttgtttcatgcagattgcattggaggaagggaaaatgaagttcctaac
cggagctggtactgtcaaatttgccactcgaggaaacaacttcaggtattacaatcatat
tgcaaatcccaatgtaaaaatgatggtgagaagagcaaagattggtcagataaagaatcc
aaagtttcgtggcttgtcacaaacattgaaattgttcagcagttgcttctgaattatctc
caggaagttggttcttcagatgatgttcatctatttgttcgctggttttatctctgcctg
tggtacaaagatgattcaaaagctgagcagaagtttatttactatctctctagattgaaa
tctatggcaatagtgagggacggtggcaatacttcctcattattgactagggattcagtt
aagaaaatcactctcgcactaggacaaaataattccttctctagaggttttgataagatc
cttcacatgcttctggcaagtttaagggaaaattctccggtaattagagccaaggcttta
cgagcggtcagtattatagttgaagctgatccagaggtattgggagacaaacgtgtccaa
ttggctgttgaaggaaggttttgcgattctgcaatatctgtcagagaagcagctttggaa
cttgttggcaggcatattgcctcccatcctgatcttggtttcaagtattttgataagatt
gctgagagaaccaaagatactggagttagtgtgaggaaacgtgccatcaaaatcattcga
gatatgtgcacatcaaatgcaaacttctcggaatttaccagggcatgcatagagataatc
tctcgagttggtgatgatgaatcaagtattcaggatctcgtttgtaagacattttatgag
ttctggtttgaggagccttctggttcacaaactcagttctttggagatgatagctctgtt
ccattggagatcgccaagaaaaccgagcaaattgttgaaatattgaggaaaatgccaaat
catcaactacttgtgacaattattaagagaaacttagcacttgattttttcccacaatca
actaaggctgttggcatcaaccctgtttccctcacctcagttcgcaagcgatgtgagttg
atgtgtaagtgcttattggaaaggatattgcaggtggaggagagaagtaatatggacacc
gaggtgcgtgcacttccatatgtattggtcttgcatgcattttgtgttgtggatccaatg
ctctgtgcacctgcctccaacccatcccagtttgtggttactctccaaccttaccttaag
acccaggttgataatcgagtggttgctcaattacttgagagtatcatattcataattgat
gcggttctgcccttgctacggaagttatctccaaatgtttctgaagacctagagcaagac
ttgaaacacatgattgttaggcactccttcttgacagtcgtacatgcttgcataaagtgc
ctttgctctttgagtaaggtagcaggtaaaggtgcatcggttgttgggtatcttattcag
gcgtttttcaaacgcttggattctctagggattgataacaaacagaacaaacttgatgaa
gttggttggtacaatgttaagacatcaatttggattgtgaaattgcagctgctaggacgt
tcactcttctgtcttggattacttattcgctatggtagtcctttgttgagcaattccagc
aacaagaatgttgatgtcacaaaaagtctcagcttgttgaagaagtacctggtgacggaa
gatttggttattagggttagagcgctgcaggctttgggatttgttcttattgctaggcct
gaatttatgctggaagaagatgttgggaaaattgtagaggaagcattgtcatctggttct
gatgttcgtctcaagatgcaagcattgcaaaatatgtatgattaccttcttgatgcggaa
agtcaaatgggaacagatcaaccagatgatggagctgcccctactgctgctgtggatggt
ggcccaagtgtaccagttgctgccggtgccggagataccaacatatgtggcggtattgtt
cagttttattgggagaaggttctagggagaagcctagatttaaatggccaagttcgtcaa
actgccctcaagattgtggaagtggtgcttcgccaaggtcttgttcatcctattacttgt
gttccataccttatcgcactagaaacggacccccatgaggcaaatgcgaagctggctcac
cacctattgatgaatatgaatgagaagtacccaacattttttgaaagccgcctgggggat
ggtcttcaaatgtcatttatgttcatccaaactattagtcgttccgacaatgcaaatcaa
aaaattcaatccaagggctctggcaatttgaaaggcagatctgatggcagttcgttgact
caagcaagacttggggtttctcgaatttacaagctcatacggggaaaccgagtttcgagg
aacaattttatatcctccattgtgcggaagtttgacaacccacgcttgaatgactcaatg
atacctttccttatgtactgtgcggaaatacttgcattattaccatttacattccccgac
gagcccctatatttgattcatgctattaatcgaataatacaagtaagaggtggagcactt
caagaagaaatcaaagaattgggcatgcatttggtgcaacgcaatccccagaattttcat
tatgaaaatggaatgattcagccgcaacaacctgctcttttttctggtaatataatttta
tcagatatgaatgggtccgtggagcacgatcagtctcgccctttttgtgattttacatcg
atggatttgaatcagcaaatcccaccagagtcagttgcgcatcatgaattgagcaataat
aataatacattggagggaaaattccacaacatttgctcagtggaccagtatagcatctca
aaagatgaccttcagaaaattcagacaatgagcctggcagctattgcactgcaacttctt
ttgaagctaaagagacatttaaaaatcatgtacagcctgaatgatgctcgatgccagtct
ttcaatccaaatgaaccaccaaaaccgggagagtttctgtccaagcagaatgttcctttc
gacatcagcgacacatgcaccactttaccaacaacttatcaagagtttatgcaaagatac
caggatttcaagagtactcttagggacgatgcattcgattattctgcatacacagtgaac
atcaaaaggaagcgaccaaccccaagaaaaggacggaaatctacaatgggtggcgaggac
gaggaggaggacgaggattggagtggaggcaggaggttgggtagcagtgggaggaaaggt
agctatagcatccgaggaagtaggcaacggtga
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integrated database retrieval system
