Cucurbita maxima (winter squash): 111493076
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Entry
111493076 CDS
T05246
Name
(RefSeq) eukaryotic initiation factor 4A-3-like
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03013
Nucleocytoplasmic transport
cmax03015
mRNA surveillance pathway
cmax03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111493076
09122 Translation
03013 Nucleocytoplasmic transport
111493076
03015 mRNA surveillance pathway
111493076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmax03019
]
111493076
03041 Spliceosome [BR:
cmax03041
]
111493076
03009 Ribosome biogenesis [BR:
cmax03009
]
111493076
03012 Translation factors [BR:
cmax03012
]
111493076
Enzymes [BR:
cmax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111493076
Messenger RNA biogenesis [BR:
cmax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111493076
mRNA cycle factors
Stress granule specific factors
111493076
Spliceosome [BR:
cmax03041
]
Complex C
Other components
EJC/TREX
111493076
Ribosome biogenesis [BR:
cmax03009
]
Eukaryotic type
90S particles
Helicases
111493076
Translation factors [BR:
cmax03012
]
Eukaryotic type
Initiation factors
eIF-4
111493076
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Cas3-like_C_2
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-GeneID:
111493076
NCBI-ProteinID:
XP_022998447
UniProt:
A0A6J1K814
LinkDB
All DBs
Position
Unknown
AA seq
410 aa
AA seq
DB search
MAAAATTSVVPPNRRRAITAPEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKP
SAIQQRAVRPIIDGRDVIAQAQSGTGKTSMIALTVCQMVDTSSREVQALILSPTRELATQ
TEKVILAIGDYINIQAHACIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAI
KLLVLDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHEILEMTNKFMTDPVRILV
KRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVEWLTEKMRSNN
FTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELY
IHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgcagctacaacaagcgttgtgccgccgaatcggcggcgagcgattaccgcg
ccggaagataagttggaattcgagacgacggagggggttgagccgatcttgagtttcgat
cagatgggtattaaggatgatcttctccgtggaatatatgcatatggttttgaaaagccc
tcggccattcagcaaagagccgtgaggcctattatcgatggtcgagatgtcattgctcag
gcccaatctggaactggcaagacctccatgattgcccttaccgtttgccagatggttgat
acctccagcagagaggtgcaggccttgatcttgtcccctacgagagaattggctactcag
accgagaaggttatattggcaattggcgactacattaatatacaagcacacgcatgtatt
ggaggcaaaagtgtgggtgaagatattagaaagcttgagtttggagttcaggttgtgtca
ggaactcctggaagagtctgtgacatgatcaagagaagaacattgcgtaccagagccatt
aagttgttagttctggatgaatctgatgagatgctgagcagagggtttaaagaccaaatt
tatgatgtatatcgatatctcccaccagagcttcaggttgtcttgatttctgctactctt
cctcatgaaatcttggagatgacgaataagtttatgacagatcctgtgaggatccttgtg
aagcgtgatgagttaactttggagggtattaagcaattcttcgttgcagttgagagggaa
gagtggaaatttgataccttatgtgatctttatgacaccttgactatcacccaagccgta
attttctgtaacaccaagcgtaaggttgaatggctgactgagaagatgcgcagcaataac
ttcacagtttcacatatgcatggagacatgcctcaaaaggaaagagatgcaattatgggg
gagtttcgatcgggaactacccgtgtcctaatcactactgatgtttgggcccgagggctt
gatgttcagcaggtatcactagtgataaattatgaccttccaaacaatcgagaactttac
attcacaggataggaaggtctggtcggtttgggcgcaagggtgttgctatcaacttcgtg
aaaagtgatgacattaagatcctgagagatattgaacagtactacagtacccagattgat
gagatgcccatgaacgttgctgatttgatttag
DBGET
integrated database retrieval system
