Cucurbita maxima (winter squash): 111493081
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Entry
111493081 CDS
T05246
Name
(RefSeq) ubiquitin receptor RAD23b-like
KO
K10839
UV excision repair protein RAD23
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03420
Nucleotide excision repair
cmax04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111493081
09124 Replication and repair
03420 Nucleotide excision repair
111493081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cmax03051
]
111493081
03400 DNA repair and recombination proteins [BR:
cmax03400
]
111493081
Proteasome [BR:
cmax03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
111493081
DNA repair and recombination proteins [BR:
cmax03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
111493081
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
CUE
UBA_3
TECR_N
Dsc3_N
MCM_N
Rad60-SLD_2
UBA_RAD5A
Med13_C
Motif
Other DBs
NCBI-GeneID:
111493081
NCBI-ProteinID:
XP_022998454
UniProt:
A0A6J1KED6
LinkDB
All DBs
Position
Unknown
AA seq
387 aa
AA seq
DB search
MKLTVKTLKGSHFEIRVQPTDTVMAVKKHIEDIQGKANYPCGQQLLIHNGKVLKDETTLA
ENKVSEEGFLVVMLSKSKTSGSAGQSSTQPAQNPPVAQPIINSTPPTQVAPSPTPAAQAP
APAPPSAPKNTTSTSDRATDNVQTDTYGQAASNLVAGNNLEETIQQIMDMGGGNWDRETV
VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATGTDGSLPAPASGAPNTAPL
NMFPQALPAGGGSGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL
RLIQDHHAEFLQLINEPVDNFEGEMFEQADPDMPHAINVTPAEQAAIERLEAMGFDRALV
IEAFLACDRNEELAANYLLENSGDFDD
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcactgtgaagaccctcaagggaagccacttcgagattagggttcagcccacc
gacaccgtgatggctgtcaagaaacatattgaagatatacaaggaaaggctaattatcct
tgtggtcagcaattattgatacacaatggtaaagttctaaaagatgaaactacgctggca
gaaaacaaagtatctgaagagggtttcctagttgtcatgctcagcaagagcaaaacgtct
ggctcagcagggcagtcatcgactcagcctgctcaaaacccacctgtagctcaaccaatt
ataaattcaactcctcctacccaagttgcaccatcaccgactcctgcagctcaagctccc
gcaccagccccgccgtctgcccctaagaacactacatctacttcagacagggcgacagat
aatgtgcaaacagatacgtacggtcaagctgcttcaaatttggtcgctggtaataacctg
gaagagaccattcaacaaataatggatatgggaggtggcaactgggacagagaaacagtt
gttcgtgcactaagagctgcatacaacaatccagagcgtgcagtggattacttgtactcc
ggtatcccggaatctgcagaagttgcagtaccagtgggtcgttttggttctggtcaagcc
actggaactgatggatcccttcctgcacctgcctctggagcacccaacacagcccccttg
aacatgtttcctcaggcacttcctgctggtggcggcagcggtggcggcggtaatcttgga
tctcttgaattccttagaaacaatccacagtttcaagccttgcggacgatggtgcataca
aaccctcaaatcttacagcccatgcttcaagaacttggaaagcagaatccccagcttttg
agactcattcaggatcatcatgcagagttccttcagttaattaacgaacctgtcgataat
tttgagggagagatgtttgaacaggctgacccggacatgcctcatgccattaacgttact
ccagccgaacaggcagccatcgaacgactcgaggcgatgggattcgatagagccttagtc
atcgaggcatttttggcgtgtgatcgcaacgaggaactagcagctaactacttactggag
aattctggagattttgatgactaa
DBGET
integrated database retrieval system