Cucurbita maxima (winter squash): 111493133
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Entry
111493133 CDS
T05246
Name
(RefSeq) formamidopyrimidine-DNA glycosylase isoform X1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
111493133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmax03400
]
111493133
Enzymes [BR:
cmax01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
111493133
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
111493133
DNA repair and recombination proteins [BR:
cmax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
111493133
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
Fpg-like_C
NFACT_N
Ribosomal_S13
DUF7547
Motif
Other DBs
NCBI-GeneID:
111493133
NCBI-ProteinID:
XP_022998520
UniProt:
A0A6J1KCR6
LinkDB
All DBs
Position
Unknown
AA seq
406 aa
AA seq
DB search
MPELPEVEAARRAIEEHCVGKVIKKAVIADDSKVIDGISPSDFEASLLGKTILSAHRKGK
HMWLRLDSPPFPTFHFGMAGAIYIKGVAVTNYKRSVVNEDDEWPSKYSKFFVELDDGVDL
SFTDKRRFAKVCLLKDPASVPPISKLGPDALLEPMALDDFIESLGKKKLAIKTLLLDQSY
ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQKVIEKALEVGADSSRFPNNW
IFHSREKKPGKAFVDGKEIHFITTGGRTSAFVPELQKLTGAEPKNQNSKRKINEGKKMND
EGVGELVSKTKKTADTTDTKTKSKPKGPSKKPSTKRKSKINEDDGSDEEAENDDASDDED
NSHDIGKTKAGKRTNVGRMHNASVSEKPSKQTVPSSRSGRQRKKTK
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgccggagttacctgaggtggaggcggcgaggagggccattgaagagcattgtgtcggg
aaagtcatcaagaaggccgtgatagctgacgattcgaaggtcatcgacggcatatctccc
tctgacttcgaggcttcgctcttaggcaaaaccatcctctctgcccatcgcaagggcaaa
cacatgtggctccgcctcgattctccccctttccctacatttcacttcgggatggcgggt
gccatatacatcaagggcgtagctgtcacgaactataaaaggtctgtggttaatgaagat
gatgagtggccttccaagtactcaaagttctttgttgagcttgacgatggtgtagaccta
tccttcacagacaaaaggcggtttgcaaaagtctgcctgctgaaagatccagcttcagtg
cccccaatatctaagcttggcccagatgctcttttagagcctatggcactggatgacttt
attgaatccttgggcaagaagaaactggctattaagactctattgcttgatcagagctat
atttcgggtattggcaattgggttgcagatgaagtgctatatcaagcgagaattcatcca
aatcaaagtgctgctaccctatccaaagaaagttgtgcagctttgcacaagagcatacaa
aaggtaattgaaaaagcgcttgaagttggagcagatagtagtcggtttcctaataattgg
attttccattcacgggaaaagaagcctggcaaggcttttgttgatggtaaggaaatccat
ttcatcactacaggcggcaggacatcggccttcgtacctgagttgcaaaagcttactgga
gctgaaccgaaaaatcaaaattcaaagagaaaaatcaacgaaggcaaaaaaatgaatgat
gagggtgttggtgaactagtgagcaagacaaagaaaactgcagatacaacagatacaaag
acaaagtcaaagcctaagggtccctctaagaagccttcaaccaaaagaaaatccaaaatc
aatgaggacgatggctctgatgaagaagctgaaaacgatgatgccagtgatgatgaagac
aacagtcatgacattggaaagacgaaagcgggaaagaggacgaacgttgggcgaatgcac
aatgcttctgtatcggagaagccttcgaagcaaacagttcctagcagtcgaagtggtagg
cagaggaagaaaacaaagtaa
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