Cucurbita maxima (winter squash): 111493350
Help
Entry
111493350 CDS
T05246
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g15820, chloroplastic
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
cmax
Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmax03041
]
111493350
Spliceosome [BR:
cmax03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
111493350
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR_2
PPR
PPR_1
PPR_long
Motif
Other DBs
NCBI-GeneID:
111493350
NCBI-ProteinID:
XP_022998786
UniProt:
A0A6J1KB64
LinkDB
All DBs
Position
Unknown
AA seq
788 aa
AA seq
DB search
MSIRTSAFATVTLLRSLTLPFSQCHNHFRCWNYVIRSLSIPTYSAKGRRQLPRIPAFASS
SSVEALVYDRDSPAESEEPLCSPYSNGAEEFASADLKHLGAPALEVKELDELPEQWRRSK
LAWLCKELPAHKPGTLIRLLNAQRKWMKQDDAAYLIVHCLRIRENETAFRVYKWMMQQHW
YRFDYALATKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHILIVAYLSAPVQGCIE
EASTIYNRMIQLGGYPPRLSLHNSLFKALVSKPGDLSKHHLKQAEFIYHNLVTTGLELHK
DIYGGLIWLHSYQDTVDKERIMSLRKEMQQAGIEEEREVLVSILRASSKLGDVMEAERSW
LKIKSFDGSMPSQAFVYKMEVYAKVGNPMKALEIFREMEQLNSISSAAYQTIIGILCKFE
EVTLAESVMAGFIKSNLKPLKPAYVDLMNMFFNLSLHDKLELTFSQCLEKCKPNRTIYSI
YLNSLVKVGNLDRAEEIFSQMQTNGEIGVSARSCNIILSGYLLSGDYLKAEKIYDLMCQK
KYDIDPPLMEKLDYVLSLSRKEIKKPVSLKLSKEQREILVGLLLGGLEIESDEGRKNHRI
QFEFHEDCSTHSCLRRHVYEQYHEWLHPASKLSDSDTDIPYKFCTVSHSYFGFYADQFWP
RGHPAIPNLIHRWLSPRVLAYWYMYGGCRISSGDFVLKLKGSREGVVKIVKSLREKSMSC
KVKRKGRVYWIGLLGSNATWFWKLIEPFILDDLKDSLQADNLNLEKAVNETYNINFDSQS
DSDEEASS
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgtccattcgaacctctgccttcgccaccgtcacccttctccgctctctcactcttccc
ttctctcaatgccacaaccacttccgttgctggaactacgtcatccgttctctctctatc
ccaacatattcagcgaaaggacgacgacaacttccgagaattcctgcctttgcttccagt
tcttccgttgaagcgttggtgtatgaccgagattccccggccgaatctgaagagcctttg
tgttctccatacagtaatggcgctgaggagtttgcctcggcggatttgaaacacttggga
gcgcctgcgcttgaagtcaaggagctggatgagttgccggagcaatggcgtcgatccaaa
ttggcttggctttgtaaagaattgccggcacataagccgggaacattgatacggctgctt
aatgctcagaggaaatggatgaagcaggatgacgcggcctatctcatcgtgcattgtttg
cgtattcgcgaaaatgagactgcttttagggtgtacaagtggatgatgcaacaacattgg
taccgatttgattatgctttagctactaagcttgctgattacatgggcaaggaacggaag
ttctcaaagtgtcgggaagtatttgatgatataattaatcagggatgtgtgccaagtgaa
tccacatttcatatattgattgttgcctaccttagtgcacctgtccaaggatgcatagag
gaagcaagtaccatttacaatcgtatgattcagttaggtggttacccaccacgtcttagc
ttgcacaattctctctttaaagctcttgtgagcaaaccaggggatttgtcaaagcatcat
cttaaacaggctgagttcatatatcacaatctggtaacaactggacttgagttgcataaa
gatatatatggtggtctaatttggctacatagttatcaggacactgtagacaaagaaagg
ataatgtcactaaggaaagaaatgcaacaagcaggaattgaggaagaaagagaagtcctt
gtatccatcttgagagcgagctcaaaattgggggatgtgatggaagcagaaagatcgtgg
cttaaaattaagtcttttgatggtagcatgccatctcaggcttttgtttacaaaatggaa
gtatatgcaaaggtgggtaaccctatgaaagctttggagatatttagggagatggagcag
ttgaactctataagtagtgcagcatatcagacaattattgggattttatgtaaatttgaa
gaggtaacacttgcagaatccgtcatggcaggcttcataaagagcaatttaaagcccctc
aagccagcttatgttgatttgatgaatatgtttttcaatttaagcttacatgataagtta
gagttaaccttctcccagtgccttgagaagtgtaaaccaaatcgtactatttacagcata
tatttgaactctttggtaaaagttggtaatctcgacagggctgaagagatatttagtcag
atgcaaacaaatggagaaattggtgtaagtgctcgttcatgcaacattattttaagtggg
tacctgttaagtggggattatttgaaggctgaaaaaatatatgatttgatgtgtcagaaa
aagtacgacattgatcctccattaatggagaaacttgattatgtcctaagcttgagtagg
aaggagattaagaagccagtaagcttgaagttgagtaaagaacaaagggagattttagta
gggttgttattaggtggcctggagatcgaatctgatgaagggaggaagaatcataggatc
caatttgaattccacgaagattgtagcacccactcttgtttgaggagacacgtatatgag
caatatcatgagtggttacatcctgcttcaaagttaagcgatagtgatacagatatacca
tataaattctgcaccgtttcgcattcatattttggtttctacgccgatcagttttggcca
cgaggccatcctgcaatccctaatctaattcaccggtggctttcacctcgtgttcttgct
tactggtatatgtatggaggctgcaggatatcgtcaggggatttcgtactgaagctaaag
ggaagtcgtgagggtgttgtgaagattgttaaatctctgagagaaaagtccatgtcttgc
aaggtcaaaaggaagggcagggtgtattggataggcttacttggaagcaacgccacatgg
ttctggaaactaatcgaacctttcattctggatgacttgaaagatagtttacaggcagac
aaccttaacttggagaaggctgtaaatgaaacttacaatatcaactttgatagtcaatct
gattccgatgaggaggcgtctagttag
DBGET
integrated database retrieval system
