Cucurbita maxima (winter squash): 111493438
Help
Entry
111493438 CDS
T05246
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36-like
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111493438
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cmax01002
]
111493438
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmax04121
]
111493438
03036 Chromosome and associated proteins [BR:
cmax03036
]
111493438
03400 DNA repair and recombination proteins [BR:
cmax03400
]
111493438
Peptidases and inhibitors [BR:
cmax01002
]
Metallo peptidases
Family M67
111493438
Ubiquitin system [BR:
cmax04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
111493438
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
111493438
BRISC complex
111493438
Chromosome and associated proteins [BR:
cmax03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
111493438
DNA repair and recombination proteins [BR:
cmax03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
111493438
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
Tim29
Motif
Other DBs
NCBI-GeneID:
111493438
NCBI-ProteinID:
XP_022998919
UniProt:
A0A6J1KFN1
LinkDB
All DBs
Position
Unknown
AA seq
435 aa
AA seq
DB search
MSLTAVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHLKNGSVTALIWGASPQTRSDRR
KDRVETHPEQLAAASAQADRMTTMTGRTTRVIGWYHSHPHITVLPSHVDVRTQGTYQLLD
SGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSRPISLSPVYRNSVIDVESSLSSS
DNLSAKVGGPGESPEQDTGDSMVAGAMKGSGRSSELGYFFANADTNYQGKEKMGDSYLTS
NTNSGTTDIDPMDLTESMQEAMHRSNIEMSAAEFSRKEIPLHVMPSASLIKLDSSLMSFT
DLQNVLFEEERSAYNQAILNNMKDGKAHPLTFIHHTSTYQASMCKLIEYCLSPAISALQD
RLKENETRLALLAEEARNLEVEAGKSNESVPGSPHQVTHGSRASASTTHRDSYASTASVG
ARSAGSSMQRSRKGL
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgacggccgtgaagatgtccgaagacgtttggttcacttgtctcactcatgca
ttgtccaccgagactgaagaaatcatggggcttcttcttggcgatattgagcatttaaaa
aatggaagtgttactgcactaatttggggagcatcgcctcagacacggtctgacagaagg
aaggaccgtgtggagactcatcctgaacaattggctgctgcatctgcccaggctgataga
atgacaacaatgactgggagaacaacaagagttattggatggtaccattcacatcctcat
ataacagtgcttccttctcatgttgatgtgcgaactcaagggacatatcagctccttgat
tctgggtttattgggctgatattttcctgctttagtgaagatgcaaacaaggttggaaga
attcaagttattgctttccagtcctctgatggaaaacagaatcacctctcaagacctatt
tccttatctcctgtgtatcgaaattcagtgatcgatgttgaatcttctttgagttcctct
gataatttatcagcaaaagtgggcggaccaggggagagtcctgaacaagacactggtgat
tcaatggttgctggagctatgaagggttctggacgatcttcagagttgggctatttcttt
gctaatgctgacaccaactaccaaggaaaagaaaaaatgggggatagctatcttactagc
aatacaaacagtggtactactgatatcgatcctatggacttgactgaaagtatgcaagaa
gcaatgcaccgttcaaatatcgaaatgagtgctgctgaattctcgaggaaagagattcct
ctgcatgtgatgccgagtgcttccctcataaagcttgattcatcattaatgtcttttaca
gatttacaaaatgttctgtttgaagaggagagatcagcttataaccaagccatcttaaat
aatatgaaggatgggaaagcgcatccgctgacgttcatacatcacacctcaacatatcag
gcttcaatgtgcaagttaattgaatattgtcttagtcctgccataagtgcactccaggac
cgtctaaaagagaacgaaactcggttagcattgctggctgaggaagccaggaatctggaa
gttgaggctggaaaatcaaatgagtcagtcccgggatcacctcaccaagttactcatgga
tctcgagcaagcgcttcaactacacacagggactcgtatgcttcaactgcatcagtgggt
gcgcgaagtgcaggaagctctatgcagcgaagtagaaaggggttgtga
DBGET
integrated database retrieval system
