Cucurbita maxima (winter squash): 111493491
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Entry
111493491 CDS
T05246
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
cmax
Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cmax04812
]
111493491
Cytoskeleton proteins [BR:
cmax04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
111493491
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_SPT8
WDR90_beta-prop_4th
eIF2A
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_IP5PC_F
Beta-prop_Vps41
Beta-prop_VPS8
Beta-prop_RIG_1st
Beta-prop_WDR19_1st
PROPPIN
VPS8_N
Beta-prop_NWD2_C
Csm6_6H
Motif
Other DBs
NCBI-GeneID:
111493491
NCBI-ProteinID:
XP_022998967
UniProt:
A0A6J1K9I2
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS
GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
SDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD
FKSHEGPIQCIDFHPHEFLLATGSADKAVKFWDLETFELIGSAGPETTGVRCLTFNPDGR
TLLCGLHENLKVFSWEPIRCHDSVEVGWSRLSDLTVHEGKLLGCSYNQSCVGVWVVDITR
TEPYAINNVNRLNGRSEPKSSSNLPLQNESNAKAGFGGLSVSQTSEPQLKETKTSGRLSV
SQSSDVVKDPKSLSSTGNGPNTPQRINLNAGPKTNSVSSVTVPSAVVPKRNSVKVTSAFN
NPIFNKSDVIPVIVPRTSSRHEHDDSRKDFDVAGRTTPLPRTNSRNEQDDSRKEFDVAGR
TVRVPLLSKTTDNRRLFPNVRDEVDNTTISVLSESRGLKANDMGTIADNRNSLHDESRGR
KLSRDTSFPEVTKGGRIRSHVDWEKRERSNFSRLTYNASAGRAAALENLPLNYGRDYHRS
PEKETVAPASDEHTIENVLQQHDQFVNSMQSRSAKLQAVYRYWERHDIKGAVSAMEKMAD
HAVAADVISILTNRIEVVTLDICSCILPLLSGLLESDLDRFLDISMEMLVKLVRTFGSVI
YSTLSATSSVGVNIEAEQRLERCNLCFIELEKVKRCLPALIRKRGSVAKSAQELNLALQE
FQ
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgactaccaaacgggcgtacaagctacaagaatttgtggcacattcttccactgtcaat
tgcctgaagattggaaggaagtcatcccgtgttcttgtcacaggtggggaagacttcaaa
gtcaatctctgggctattggtaaacccaacgccatactgagtttgactggccatacaagc
ggaatagattctgtaagctttgactcatcagaagtgttggtagctgcaggggcagctagt
ggcaccatcaagctttgggatttggaggaggctaaaattgttcgaacacttacggggcat
agatcgaattgcatttctgtggattttcatccctttggggaattctttgcttctgggtcc
tcggacacgaatcttaagatatgggatatcagaaagaaagggtgtatccacacatacaaa
ggacacactcgaggagtcaatgcaatcagatttactcccgatggccgttgggttgtatct
ggtggagaagacaacacggtgaagctctgggatttaacggctggaaagttgttgcatgat
ttcaagtcccacgagggtccgattcagtgtatagacttccaccctcatgaatttttgctg
gcaacaggttcagcagataaagcggttaaattttgggacctagaaacctttgagttgatt
ggttcagctggacctgagaccactggtgtccgttgtttaacttttaatcctgatgggagg
acactgctttgcggattgcatgaaaacttgaaggttttctcatgggaaccaataagatgt
catgacagtgtggaagtcggttggtccaggctgtccgatcttactgttcatgaggggaaa
cttcttggctgttcatacaatcagagctgtgttggagtgtgggttgtagacattacgcgc
accgaaccctatgcaattaacaacgttaaccgactaaatggtcgatcagagcctaaatcc
agcagtaatctaccactgcaaaatgaaagcaatgccaaggctggttttggtggattgtca
gtatcacaaacttctgaaccacaattgaaggaaaccaaaacatcgggaaggttgtcagtt
tcacaaagttcagacgttgtcaaggatccaaaatctttgtcatccacaggaaatggacca
aatactcctcagaggatcaatttaaatgctggcccaaagactaattcggttagctcagta
acagtacctagtgcagtggtaccaaagagaaactctgtgaaggttacttcagcattcaac
aacccaatcttcaataaatcagacgtgatacctgtaatcgtacccaggacaagttcaagg
cacgagcatgacgattctagaaaggattttgatgttgctggaagaacaacaccactaccc
aggacaaattcaaggaatgagcaggatgattctagaaaggaatttgatgttgctggaaga
acagttcgagtaccattgctatcgaaaactactgataataggaggctgtttccaaatgtt
agagacgaagtggataacacaactatctctgtcctttctgaatccagaggtttgaaggcc
aatgatatgggcaccattgcagataataggaattccttgcatgatgaatctcgagggcgt
aaactaagccgggacacatcttttcccgaagtgacaaaaggagggagaatacgttctcat
gtagattgggagaaaagagagagatctaattttagccggttgacatacaatgcctccgct
ggaagagcagctgcactggaaaatcttccattaaattacgggagagattatcatcgatct
cccgagaaagaaacagtagcacctgcaagcgatgagcataccatagaaaatgttctacaa
caacatgatcagtttgtcaactcgatgcaatctcggtcagcaaaattacaagcagtgtat
agatattgggaaaggcatgacatcaaaggggcggtttctgcaatggaaaaaatggccgat
catgcggttgctgccgatgtaattagtattttgacaaatagaattgaagttgtcactctg
gatatctgcagttgtattctcccacttctttctggcctccttgaaagtgacttggacagg
tttttagacatttctatggaaatgctagtgaagctggtgaggacatttgggtcagtgatc
tattcaacgttatcggcaacatcatctgttggcgtgaacattgaggcggagcaaaggttg
gagcggtgtaatctctgcttcatcgagcttgaaaaagtcaagcgctgcttgccagctctt
ataaggaaaaggggatcggtagcaaagtcagcacaggagttgaatcttgcactgcaggag
tttcaatga
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