Cucurbita maxima (winter squash): 111493731
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Entry
111493731 CDS
T05246
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH15 chloroplastic
KO
K26077
ATP-dependent RNA helicase ISE2 [EC:
5.6.2.6
]
Organism
cmax
Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmax03041
]
111493731
Enzymes [BR:
cmax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111493731
Spliceosome [BR:
cmax03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
111493731
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
DEXQc_Suv3
Helicase_C
AAA_22
MMS21_N
PhoH
Motif
Other DBs
NCBI-GeneID:
111493731
NCBI-ProteinID:
XP_022999325
UniProt:
A0A6J1KF30
LinkDB
All DBs
Position
Unknown
AA seq
1176 aa
AA seq
DB search
MASPAINVFSIISPQHLWPPLSYPFPSSLCPRCFSPPIQAPRFCRLKPLPIFSPFPVPFR
PSVRSPRSIFSEKPQLSDVDEDEDEDEDEDEDEDDDDDVAAEEYDIDAFGELEQRYDEVE
LSMEATEISIAPEEFKSHRVEKLLGEVREFGEGIVDVDELASVYNFRIDKFQRQAIEAFL
RGSSVVVSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVG
LLTGDSAVNKDALVLIMTTEILRNMLYQSVGMASSESGLFHVDVIVLDEVHYLSDISRGT
VWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSTKRPVPLTWHFSTKAS
LLPLLDEKGTHMNRKLSLNYLQLHASGAKLYKDDGSRRRNPKRHGNEISNDRTSSLSRQA
TLSKNDINSIRRSNVPQVVDTLWQLKSKDMLPAVWFIFSRKGCDAAVQYIEGKNLLDDCE
SSEVELALRKFRIQFPDAVRESAVKGLLQGVAAHHAGCLPLWKSFIEELFQRGLVKVVFA
TETLAAGINMPARTAVIASLSKRSNSGRTQLTSNELLQMAGRAGRRGIDKKGHVVLLQTP
YEGAEECCKLLFAGIEPLVSQFTASYGMVLNLLAGAKVTHTSEMDGTKAFQAGRTLEEAR
KLVEQSFGNYVGSNVMIAAKEELVKIEKEIEVLNLEITDEAIEKKCRRLLSDVAYNELVE
LQEELRSDKRQRTELRKEMELQRIFALKSLLQNLGDGQLPFLCLQYKDSEGVQHSIPAVL
FGNMDSSKLINMFPADNSLSGAEPNLGKNLDPGAESSYYVALGSDNSWYLFTEKWIKTVY
KTGFPNVALTKGDPLPREIMRTLLDKEGMKWEKLADSELGSLSCMEGSLETWSWSLNVPV
LNSLSENDELLQMSESYMESLTRYKEQRNKVSRFKKRISRTEGFREYKKILDMANIIEDK
IRQLKARYKRLSNRIQQIEPSGWKEFLQISNVIHEIRALDINSHVMFPLGETAAAIRGEN
ELWIAVVLRNKFLVQLKPTELAGVCASLVSEGIKIRPGRDNNYIFEPSRTVINMVNFLEE
QRNSLLDLQEKHGVDIPCSLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTID
LLAQIPKLPDIDPSLQRNASTASDVMNRSPISELAG
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atggcctctcccgccattaacgttttctccataatttctccccaacatctctggccgcca
ttatcttatcctttcccctcctctctatgtcctcgttgtttttcacctccgattcaggcc
ccgaggttttgtcgccttaaacctctccccatcttctctccctttccagttccatttcga
ccttccgtccgctctccgaggtccattttctctgaaaaaccccaactctccgatgtcgac
gaggatgaggatgaggatgaagatgaagatgaagatgaagatgacgacgacgacgtggca
gccgaggagtacgatatcgatgcgtttggagaattggagcagaggtacgatgaagtggaa
ttgtcgatggaagctactgaaatctccattgcacccgaggagttcaaatcgcatagagtc
gaaaagcttctcggtgaagttagagagtttggagaaggaattgtcgacgttgatgaactc
gcttcagtttataatttccgtatcgacaagtttcagcgacaagccatagaagcattcttg
agaggatcgtcggtggtggtatcggcgcctaccagcagtggcaagactttgattgcggag
gcggcggctgttgctactgtagccaggaagagacgattgttttacacgactccactgaaa
gcattgtcgaatcagaagtttcgggagttccgtgagacgtttggagacagcaacgttggg
cttcttacgggagattctgcagttaataaagatgccctggttttgattatgactacagaa
attttgcgcaacatgttgtatcagagtgttggaatggcctcatctgaaagtggacttttt
cacgttgatgtaattgttttggatgaagttcattaccttagtgatatctctcggggcaca
gtgtgggaagagattgttatttattgcccaaaagaagtgcagcttatttgtctctctgca
acggttgcaaatccagatgagctggctggctggattggtcagattcatgggaaaactgag
ttagtaacatcaacaaagcgtccagtaccattgacttggcatttctctacaaaggcctct
ttacttcctctccttgacgagaaaggaacgcacatgaataggaagctgtcgctcaattat
cttcagcttcatgcttcaggagctaaattgtacaaggatgatggatcaagaagaagaaac
ccaaaaaggcatgggaatgagatcagcaatgaccgcactagcagcctgtctagacaagct
acactttcaaagaatgacataaactcaatccgccgttcaaatgttcctcaggtcgttgat
acattgtggcaactcaagtcaaaagatatgctgcctgcagtttggtttatatttagcagg
aaaggatgtgatgcagctgttcagtacattgaaggcaaaaacctgttagatgattgtgag
agcagtgaagttgaacttgcattaagaaaatttcgtattcaatttccagatgctgtccgg
gaatcggctgtgaaaggacttctgcaaggagttgctgcacatcatgctggttgtctgcct
ctgtggaagtcattcattgaagagctgtttcagaggggactagtgaaggttgtcttcgca
acagaaacattagctgctggaatcaacatgccagctaggacagcagtcattgcatccctg
agcaaacgaagcaatagtggtcgtacccagttaacctcaaatgaactgcttcaaatggca
gggcgagctggacgtcgaggtattgataaaaaaggtcatgtggtgcttcttcaaactcca
tatgaaggtgctgaagagtgctgcaagctcctgtttgctggcatcgaaccacttgtttct
cagtttacagcttcatatggaatggtattgaatcttctcgcaggtgcaaaggttactcat
acaagtgaaatggatgggacaaaagctttccaagctgggcgaacgctggaagaagctagg
aagttggttgagcagagttttggaaactatgttgggagcaatgtcatgattgcagcaaag
gaggagcttgttaaaatagaaaaagagattgaagtgctcaatttagaaataactgatgaa
gcaattgagaaaaaatgcaggaggctcttgtcagatgtggcatataacgagttagtagag
ctgcaggaggaactgcgatcagataaacgtcaaaggacggaactacgaaaagagatggaa
ttgcaaagaatttttgccctcaagtctctgttacaaaatttaggagatggacagttgccc
tttttatgtttgcaatacaaagattctgaaggagtccaacattcaattcctgcagttctc
tttggaaacatggactcatcaaagctcattaacatgtttcctgctgataattctttgagt
ggtgcagaaccaaatcttggtaaaaatctggacccaggtgctgaatcatcttattatgtg
gctctaggttcagataattcttggtacctatttactgagaaatggatcaaaactgtttat
aaaactggctttcctaatgttgctttaactaaaggggatcctttacctcgggagattatg
aggacacttctcgataaagagggaatgaagtgggagaagcttgctgattctgagcttggc
agtttatcatgtatggaaggatctctggaaacatggtcatggagtttaaatgtgcctgtt
ctgaatagtctttctgaaaatgacgaactcttgcaaatgtctgaatcatacatggaatct
ttaacaaggtacaaggagcaaagaaataaagtttcacgatttaagaaaaggatatctaga
acagaaggattcagagagtacaagaagattttagatatggccaatattatagaggacaag
attagacaattgaaggctagatataaacggctaagtaatcgaattcagcaaatcgaacca
tcaggctggaaagagtttttgcagatcagcaatgtcatacacgaaattagagcactggat
ataaattctcatgtaatgttcccactcggagaaactgcagctgctatccgtggtgaaaat
gagctctggattgccgtggttctaagaaataagttcttagtacaactaaaacctacagag
cttgctggtgtctgtgcaagtttagtttctgaaggcatcaaaatccgccccggaagagat
aacaattacatatttgagccatcaagaactgtaattaatatggttaatttcttagaagag
cagagaaattctctgttagatcttcaagaaaagcatggagtggacataccatgttccttg
gacagccaattttcaggaatggttgaggcttgggcctctggtttgacttggagagaaata
atgatggattgtgcgatggatgagggagatctggcacgcctcttgcgacgaacaatcgac
ttgttggctcaaattccgaagttgcctgatattgatccatctttgcaaagaaatgcatca
actgcttctgatgtcatgaatcgttcaccaataagcgaattggctggataa
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integrated database retrieval system
