Cucurbita maxima (winter squash): 111493803
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Entry
111493803 CDS
T05246
Name
(RefSeq) DNA mismatch repair protein MSH7
KO
K08737
DNA mismatch repair protein MSH6
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
111493803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmax03400
]
111493803
DNA repair and recombination proteins [BR:
cmax03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
111493803
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
Motif
Other DBs
NCBI-GeneID:
111493803
NCBI-ProteinID:
XP_022999426
UniProt:
A0A6J1KCZ8
LinkDB
All DBs
Position
Unknown
AA seq
1094 aa
AA seq
DB search
MQRQKSLLSFFQKSPSENRSSDGDTSSVAQRLTRFPAKPNVAGLEQPAIQNNADPSLEIR
GTDTPPEKVPCQILPVIEKNRGSSLFSSIMHKFVRVDDKHKANERDEIKKDSSQNEVWKD
SSQLPSISGKVNDPIEHTELKGASRHHSKLHAANLNGHRGPALDIESDDGIGGPETPGMR
PSASRLKRSQEIPLVGGSADLLQHSTKRIKLLQDSINSNMIHNEASDATSKFEWLNPSQI
RDANGRRPDHPLYDKKTLFIPPDVLKKMSASQKQYWNVKCQYMDILLFFKVGKFYELYEQ
DAEIGHKELDWKMTLSGVGKCRQVGVPESGIDDAVQKLVARGHKVGRIEQLESSDQTKTR
GANSVIPRKLVQVVTPSTKVDGDIGPDAVHLLAIKEESCGLDNNSIAYGFAFVDCAALKF
WTGSIKDDASCAALGALLMQVSPKEIIYEARGLTKETHKVLKKYSPTGSTALESTSGSPV
TDFLEASEVKLLIQSKGYFKGSLNSWNHTIESTDHDDIALCALGGLINHMSRLMLDDVLR
EGAVLPYQVYRGCLRMDGQTMVNLEIFRNNDDGGLSGTLYKYLDNCVTSSGKRLLRLWIC
HPLKDVEEINNRLNVVEKLMAQSEVMTLLGTTYLRKLPDLERLFGQIKATVQSSASLVLP
LIRKKLQKRRVKLFGSLVKGLRTGLDLLIQVQKEGCIISLLKVVKLPQLTSNGGLDQFLT
QFEAAVDSEFPNYQNHDVTDSDAERLSILIELFVEKATEWCEVIHALNCIDVLRSFAVIG
HSSRGSMSRPIILPQLSNSTTSPEKQGPVLQINGLWHPYALVENGESPVPNDMILGPDKD
GYHPHTLLLTGPNMGGKSTLLRSTCLAVILAQLGCYVPCETCTLSVVDTIFTRLGATDRI
MTGESTFLVECSETASVLQHATQDSLVILDELGRGTSTFDGYAIAYAVFRHLIEKVNCRL
LFATHYHPLTKEFASHPHVMLQHMACAFKDHELVFLYRLRSGACPESYGLQVATMAGIPG
RVVEAASKASQMLKKTIKESFKSSEQRSQFSTLHEEWLKTLIAVSQFRGNDLDENDAFDT
LFCLWYELKRSYHC
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgccagaaatctttgttatccttcttccaaaaatctccgtccgaaaatcggagc
tccgatggcgatacctcctccgtcgcccagaggctcactcgctttccggccaaaccaaac
gttgccggtttggagcagccggctatccagaataatgcggatccctccctggagattaga
ggaaccgacacgccgccggagaaggtgccttgtcagattttgccggtgattgagaagaac
agaggttcctctctcttttcgagcatcatgcacaaatttgtgcgagtcgatgataaacac
aaggcaaacgagagggacgagattaaaaaagattcctctcagaacgaggtttggaaagat
tcttctcagttaccttccatttctggtaaggttaatgatccaatagaacatacggaacta
aagggagcttctagacatcatagtaaactccacgctgcaaatttaaacggacatagagga
cctgccttggatattgaaagcgatgatggcattggtggaccagaaacacctggcatgcga
ccttctgcctctcgtttaaagagatctcaagagattcctcttgtgggtgggagtgctgat
ttgttgcagcatagtaccaaaagaattaaactccttcaggactcgataaactcaaacatg
attcacaatgaagcttctgatgcaactagcaaatttgagtggctcaatccctctcaaatt
agagatgctaatggtagaaggcctgaccatcctctttatgataaaaaaacattattcata
ccacctgacgtgctgaagaaaatgtcagcgtcacaaaaacaatactggaatgtgaaatgt
caatatatggacattttgcttttcttcaaagtgggaaagttctatgagctatatgaacaa
gatgctgaaattggtcacaaggagcttgactggaaaatgacactaagtggcgttgggaaa
tgtaggcaggtcggtgttcctgaaagtgggattgatgatgccgttcaaaagcttgttgct
cgtggacataaagttgggcgaattgagcaattggaatcttcggatcaaacaaaaaccaga
ggtgcaaattctgtgatacctcggaaattggtacaggttgttactccatcaaccaaggtt
gatggtgatattgggcctgacgctgttcatttgcttgccatcaaagaggagagttgtggg
ctggataataattcaattgcatatgggtttgcctttgttgattgtgctgctttaaaattt
tggactggctctatcaaagatgatgcttcctgcgctgctctcggtgccctcttgatgcaa
gtctctccaaaggaaataatatatgaagctagaggattaactaaagaaacacataaagtt
ctaaagaagtactcgccaactggttccaccgctctagaatccacatcagggtcgccagtt
acagactttctggaagcttcagaggttaaacttttgatccagtctaaaggttattttaaa
ggctccttgaattcgtggaatcacacgattgaaagcacagaccatgatgacattgctcta
tgtgctcttggaggacttattaatcatatgtcaaggctgatgttggatgatgtcttgcgg
gagggagctgtactgccataccaagtatacagaggctgtctaagaatggatggacaaaca
atggttaatcttgaaattttcagaaacaatgatgatggtggtctatcaggtacactgtac
aagtatcttgataattgtgtaacatcatcaggcaagcggcttttaaggttgtggatctgt
catcctcttaaagatgttgaagagattaataataggcttaatgtggtggaaaaactgatg
gcacaatctgaagttatgacacttcttggtaccacctaccttcgcaagcttccagactta
gagaggctgtttgggcagatcaaggctacggttcagtcatctgcttctcttgtattacca
ttgattcgcaagaagttacagaaacggcgggtgaaattattcggatctctggtgaagggc
ctcaggactggattggatttattaattcaagttcagaaggaaggttgcattatttctcta
ttaaaagtagttaaactgccacagctcaccagcaatggtgggcttgatcaattcctcact
caatttgaagcagctgtagatagcgaatttccaaattatcagaaccatgatgtaacggat
tccgatgctgaaagactctctatattaatcgagttatttgtggaaaaagctactgaatgg
tgtgaagtaattcatgccctcaattgtattgacgtgctgagatcatttgcagtaattggt
cattcatctagagggtccatgtctagacctattattttgcctcaattgagtaattcaacg
acgagtccagaaaagcaggggccagttcttcaaattaatgggctatggcatccatatgcc
cttgtggagaacggagaatcaccagttcctaatgatatgatccttggtcctgataaagat
ggctaccatccccatactctactgctaactggaccaaacatgggcgggaaatcaacactt
cttcgttctacttgtctagctgttatacttgcacagttgggttgctacgtgccttgtgag
acatgcacgctctcggttgtggataccatctttacgagacttggtgctacggatcgaatt
atgacaggagaaagtactttccttgttgaatgctcagaaacagcttcagttctccaacat
gccactcaggactctcttgttattcttgacgaactcggacgaggaacgagcacatttgat
ggctatgccattgcatatgctgtgtttcgccatctgatagaaaaggtgaactgtcgactt
ctatttgctactcactaccatcctctaacaaaggagtttgcctctcatcctcacgtcatg
cttcaacacatggcctgcgcattcaaggaccatgagctggtttttctatatcgcctccgc
tccggagcatgccctgagagctacgggttgcaagtagcaaccatggctggaatcccgggg
cgagtcgttgaagcagcttcaaaagccagccaaatgctgaagaaaaccatcaaagagagt
ttcaaatcgagcgaacaacgctcccagttttcaactcttcatgaagagtggttgaaaact
ctaatcgcggtctcgcagtttcgaggtaatgatctcgacgaaaatgatgcttttgatact
ttattttgtttatggtatgagctcaagagatcatatcactgctag
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