Cucurbita maxima (winter squash): 111494258
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Entry
111494258 CDS
T05246
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
cmax
Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmax03009
]
111494258
Ribosome biogenesis [BR:
cmax03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
111494258
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
RYDR_ITPR
HEAT_GCN1
DUF1848
DUF7194
Motif
Other DBs
NCBI-GeneID:
111494258
NCBI-ProteinID:
XP_022999923
UniProt:
A0A6J1KL31
LinkDB
All DBs
Position
Unknown
AA seq
2668 aa
AA seq
DB search
MATASHAVAVKSLNKSPGRRRFVFQTFSQRLQEIDIDVYRSLSKVKSEPSEGSSFFRDCL
MEWRELNTAEDFISCYEEIIPLAQTLPLVILHKESIFSNLLSRVHIKGRLSLEPILRLIA
ALSRDLLEDFLPFLSPLTDALVSLLEGGAAREPEIVEQIFTSWSYIMMHLQKYLTRNLVH
LLKITVPLRHYPKEYIQDFMAEATSFLLRNAPVDQLKNGIKQIILDVVKKPLATREYGAS
ALLFHTMRGTSSRFHSRAELVFRFLISGPTFESGLDSSQGSDAILEVIKCVCQRLCEEME
PKELDMIWKCLFEEIKDAITSGYVLRINQLLMLLTSAVQNVNWKQISDYKPMLELVDLHM
MKFITTTSLTMEDGLSKIIDSILQLMLVILDGLLSSEDSLSISNCSLHWAPIFQLNSSCL
LTFVREVMGKDTSVLCAFRTNILRTMNELLESSREEVVYLLLSFCERLPTEVLCTSDEEV
PRILNFFEKILGHWIKEIADFMQGSSNDIDESELAIFWGVIRCCPYILNFQASSSLLVDL
IDALDRLCTVEGNIFGVPEENWESLIGATIGSYLKLLSHEKAGLEESKRLVYLAKRYSSC
SQVLVAVADYLDFIHGPALEVDVSKRIYSEEFQADKVEDAVQVFADNLRHPDKGVRISTL
RILCHYEPLRSEIRIKDPAIDNEMETENLESCSYDSVGSEVLRLLLSIESTPASISTSRK
IILLISRVQMVLLSEKIPEAYLLVVLNGIIGIFQNRFSYIWDQASECLASLIRRHSRVVW
DKLICYFQQWLFLLYQPDRETVESSDELHDLVRCFRSFVVPSPDSTPLYTLLSLVLQSLQ
KNSTIVESQSRQILPLFLTFLGYNIDNVESVYSFKQYTCKSKEWKCVLKEWLNLLRNARN
LKSFYKSDFLKEVLEQRLLDDNDAEIQSKVLDCLLIWKDDFLIPYEHHLKNLISPKTLRE
ELTRWSLSKEKNQIDDRHRPNLLPVVTRLLMPKVRKLKVLGSRKQASVNLRKAVLQFFAQ
LDTTELPLFFALLLKPLNIIPMEADASAYSRPVSMNTSATNILKYFSAESIVALSWKKKF
GFMHVIEEVLAVFDEMLVSPFLNMILGCVVRVLGSCTSSLHAARKNEESLVENGKMCDKN
SLEINKETASPGLTSTAVKQYKDLRSLCLKVISFVLYKYEDYDFEIEFWGLFFMSVKSSI
ESFKHEGSSSEKPSSLFSCFLAMSRSHKLMPLLARERNLVPDIFSILTISTASQSIISFV
LQFIENLLTYNGELDDNDSAVRSVLLPNLDSLIQNLHVLFQSGDAKKRKLVEHLNGPMIR
IFKLLSKLVRDPLHAKMFVEILLPYLTQTRHTSGSHADTLQVIQNVVPILGSESTTKILK
AVSPLLISVEQDLRLLICDLIHALAEVDSSILCVAQIIRGLNATSAMDIGGLDFDTIVNS
YEKIDVDFFCSTSVEHALVVLSQCVHDMSSEELILRHSAYRSLLSFVEFSSSILGQGGMG
HHESIDNTTLPDNSWLKVNIMQITKKFILKHMGQAMNRETSIKKEWMNLLREMVLKFPDV
ANLCSLKALYSKDAEVDFFSNITHLQKLRRAKALIRFKNTISTVNIPEVITKNVFVPLFF
NMLFDLQEGKTENIRVACIEAIASISGQMEWKSYFALLRRCFRDLTKRPDKKKVLLRLIC
SILDNFHFQENNSVVGSTRLCGSTVVTSDMQACLSKYVFPKIQKFMNSQSERVDIYVHLA
ALKVLKLLPEDVMDSQLLSIIHHIVNFLKNRLESVREEARSALAACLKELGSEYLQVIVR
VLRGSLKRGYELHVLGYTLNFILTKFFTAPAFGKMDYLLDDLISIVEKDILGEVSEEKEV
EKLASKMKETRKQKSFETLKLIAQSVTFKSHALKLLRPVTDHMKKHLTPKVKAKLENMLT
NIAAGFESNPSVNQTDLLVFIYGLIEDGIKVENGQGESTSLLDANKRSKDVSRGKNLSCQ
IILAKSPCSHLIMVFALKLLHGYMKKMQLGKEHVPLLSMLDPFVSLLGNCLTSKYEDVLS
LTLRCLTPLLRLPLPSVKSQADKIKGVVLTIAQSSVDPCNPLVESCLRSLTVLLRNEQVT
LSTDQLHLVIQFPLFVDIHKNPSFVALSLLKAIVSCKLVVPEIYDLAIRVAELMVTSQVE
PIRKKCSKILLQFLLDYRLSEKRLQQHLDFLLSNLRYEHSTGREAVLEMLFTIVVKFPRT
VVDSISQTLFVHLVACLANDQDNNVRSMTGAVIKRLIGCISSGPLHSILDYSLSWYLGGK
QQLWSAAAQVLGLLVEAVKKGFERYIRTVLPVARGILQSVVDVTTNDQIDIFAETTTTFW
KEAYYSLVMLEKMMHQFPELFFDKDFEDIWEMISHLLLYPHMWIRSISNRLIASYFTTVI
ENSRRNSEKSLGDYSLMKPSRLFLIATSLCCQLKSDLTDKDADLIVQNLVFTICGLHSVI
GKVENTNSCPFWSTLEQPEQRLFLKAFQLLDSGKGRSMLLPRMTGVFDQDDACPDICYLL
VSNLLKQMGKVALQTDTIQMTIVFNVFRNISSQIGAEDCERYAFEILLPLYRVREGFSGK
LITDSMVQLAQEVCDKIQNCLGIQKFVQVYSQIKKRLKVKRDKRRQEEKRMAVVNPMRNA
KRKLRIAEKQRASKRRKITTMRMSRRMM
NT seq
8007 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcttctcacgcagtagctgtcaagtccctcaataagtcccctggtcgccgg
cgttttgttttccagacattctctcagagattacaagaaattgacatcgatgtatacaga
agcctcagtaaagtaaagtccgagccatccgagggatcctcctttttccgggactgtctt
atggaatggagggaattaaatactgcagaggattttatttcttgttacgaagaaatcatt
cctctggcacaaacattacctctggttatactgcacaaggagtccatattttcaaatctt
ctttctagagtacatataaaagggaggctatctctggagcctatattgaggttgattgca
gctttatcgagagatctgttggaggattttttgccattcctgtctccattaactgatgca
ttagtgtctctcctagaaggtggtgcagcaagggagccagaaattgttgagcagattttt
acatcttggtcatatattatgatgcacttgcaaaaatatcttacgcgaaatcttgtccat
ttgctaaagattactgtgccattaagacattaccccaaagagtacattcaagatttcatg
gctgaggcgacatcatttttgttgcggaatgcaccagttgatcagctaaaaaatggaatt
aaacagataatattggacgttgttaaaaaacctttagcaactagagaatatggtgctagt
gctctgctatttcacacaatgagaggaacctcatcaaggtttcattcaagagcggagctg
gtgtttcgctttttgatcagtggtcctacatttgaaagtggcctagactctagccaaggt
tcagacgctattttagaagtgatcaagtgcgtgtgtcagagattatgtgaagaaatggaa
cccaaggaattggatatgatatggaaatgcttgtttgaagaaataaaggatgccattaca
agtggttacgtgcttcgaataaatcaacttttgatgctgcttacttcagcagttcagaat
gtgaattggaaacaaatttctgattacaaaccaatgcttgagcttgtagatttacacatg
atgaaatttatcacaactacaagccttacaatggaagatggtttatccaaaatcatagat
tcgattctgcaattaatgttggttattcttgatggtcttctaagttctgaggactctcta
tctatttctaattgttcgttgcactgggctccaatatttcaattaaatagcagttgttta
ttgacttttgtacgagaagtaatggggaaggacactagtgtactatgtgcattcagaact
aacatcttaagaacaatgaatgaattgttagaatcttcccgtgaagaggttgtctatctt
cttctttccttctgtgagagattaccaacagaagtgttatgtacatccgatgaagaggtt
ccaaggattttgaactttttcgaaaagattcttggtcattggattaaagagatagctgat
ttcatgcaaggcagttctaatgatatcgatgaatctgagttggctattttttggggtgtt
attcgttgttgtccatatattctaaactttcaagccagttcatccttactagtggacttg
attgacgcacttgatcggctttgtacagttgaaggcaacatatttggtgttcctgaagaa
aattgggaaagcttaattggtgcgactataggttcttaccttaagttgctctcccatgag
aaggctgggcttgaagaatcaaaaaggcttgtgtaccttgcaaaaagatatagctcatgt
tcacaagttttggtagctgtagctgattatttggattttattcatgggccagcattggaa
gttgacgttagcaaaagaatttattcagaagagtttcaagccgataaagttgaggatgca
gtacaagtgtttgcagataatctgcgtcacccagataagggggttcgtatatctactctc
agaatcttgtgtcactatgagcctttgcggtctgaaatccgtataaaggaccctgcaatt
gataacgagatggaaactgaaaatttggaatcatgctcctatgattcggttggcagtgag
gttcttcggctgctcctttctattgaatcgactcctgcttcaatatctacgagcagaaag
attatattattaatctctagagttcagatggtcttgttgtctgaaaagattcctgaggct
tacttattggttgttttgaatggtattattggaattttccaaaaccgctttagctatatt
tgggatcaagcatctgaatgtcttgcctctttaatcagaagacactcaagagttgtgtgg
gataaattaatctgttattttcagcagtggttatttctactttatcaaccggacagagaa
accgttgaatcatctgatgaactacatgatctagtcagatgtttccgctcatttgttgtt
ccttcaccagacagtacaccactctatactctgctatccttggtgctccaatcattacaa
aaaaattcgactattgttgaatctcagtctcgtcagatcttgcctctgttcttgacattt
ttaggctacaacattgataatgtggaaagtgtgtattcattcaaacaatatacatgtaaa
agcaaggagtggaaatgtgtgctcaaggagtggttgaacttgctgagaaatgcccgtaac
ctgaagtcattttacaagagtgattttcttaaagaagttttggagcaaaggcttttggat
gataatgatgctgaaatacaaagcaaggtccttgattgcctcttaatctggaaagatgac
tttttgattccatatgaacatcatctaaaaaacttgatctcccccaagactttgagagaa
gaacttacaaggtggagcttgtcaaaagaaaaaaatcaaattgatgatcggcatagacct
aatctcttacctgtagttactcgcttattgatgccaaaagtcagaaaattgaaggttctt
ggttctcgcaagcaagccagtgtaaatcttcgaaaagctgtccttcagttctttgcacaa
cttgataccacagagcttcctcttttttttgctctgctattgaagcctttgaacattatt
ccaatggaggctgatgctagtgcttactcacgcccagtttcaatgaatacttcagcaact
aacatcttaaaatacttctcagcagaaagtatagtagcattgtcatggaagaagaaattt
ggttttatgcatgttattgaagaagttcttgcagtttttgatgaaatgcttgttagtcca
tttctcaatatgatattgggttgtgttgtccgagtattgggaagttgcacatcaagtctt
cacgcggcaaggaaaaatgaagagtctttagttgaaaatggaaagatgtgtgacaagaat
tcacttgagatcaacaaagaaaccgcatcccctggcctgaccagtacagccgtgaagcag
tataaagatttaaggtctttgtgtctcaaagtcatttctttcgttctctacaagtacgag
gattacgattttgaaattgagttctggggcctattttttatgtctgtgaaatcttcaatt
gaaagtttcaagcacgagggctcaagtagtgaaaagccaagttcacttttctcttgcttt
cttgccatgagtagaagccacaaacttatgccactattggctagggagaggaatcttgtt
cctgatattttctcaatcctcaccatctcaacagcatctcaatccatcatatcgtttgtt
cttcagtttattgaaaacctattgacatataatggtgagttggatgacaatgacagtgct
gtcagaagcgttctacttccaaatcttgattcacttattcaaaacttgcatgttcttttc
caaagtggtgatgctaaaaagcggaaattggtagaacacctcaatggaccaatgataaga
attttcaaattactctcgaagcttgtaagggatccactgcatgctaagatgtttgttgaa
atcttactcccatacttaactcaaactagacatacttctggatctcatgccgatactctg
caagtaattcagaatgtggttcccatactagggagcgagagtacaacaaaaatcttgaaa
gcagtttctccgttactgatttcagttgagcaagatttgcgtttgcttatttgtgatctt
atccatgctcttgcagaagttgattcttccatcctctgtgtggctcaaatcatccgtggt
ttgaatgcaacctctgctatggacattggtggccttgattttgacacgattgtcaatagt
tatgaaaaaattgatgtggatttcttctgttctacctcagtggaacacgctttagttgtt
ctatcacagtgcgtgcatgatatgtcgtcagaagaactaattctaagacatagtgcttat
cggtctttgctctcttttgttgaattttcttcttcaattcttggtcaaggagggatgggt
caccatgaatcaattgataatacgacattacccgacaatagctggttgaaagtaaacatc
atgcagataacaaaaaaattcattttgaagcatatggggcaagcaatgaacagagagacc
tctattaaaaaggagtggatgaatttattgcgagaaatggtgttgaaatttcctgatgtg
gctaatttatgttcgctgaaggccttgtacagtaaagatgctgaagttgattttttcagt
aacataacccacttgcagaaacttagacgagcaaaggcactgattcgcttcaaaaatact
atcagtaccgtcaacattcctgaggtcatcacaaagaatgtctttgtgccgctgttcttc
aatatgctgtttgatttacaagagggaaaaacagagaatattagagttgcttgtatagag
gcaattgcttcaatttctggccaaatggaatggaagtcatattttgctctgttaagaaga
tgttttcgggatctcactaaacgcccagataagaaaaaggttctgttgcgcttgatatgt
tctattttggacaacttccattttcaagagaataattcagtagttgggtcaacacgctta
tgtggcagtacggttgtgacaagcgatatgcaagcatgccttagtaaatatgtgttccca
aagatacaaaaatttatgaactctcagtcagaaagggttgatatttatgttcatcttgct
gcactaaaggtgttaaaattacttccagaagatgttatggattcacaacttttgagcatc
atccatcatattgttaactttttgaagaatcgtttagaaagtgtccgtgaagaagctaga
tctgcactggctgcttgtttgaaggaacttggatctgaatatttgcaagttatagttagg
gttttgagaggatctctaaagcgtgggtatgagctgcatgtgttggggtatacactcaat
tttatattgactaagttctttactgccccagcttttgggaagatggattatcttttggac
gatctcatttctattgtagagaaagatatccttggagaggtctccgaggaaaaggaggtt
gaaaagttggcctcaaaaatgaaagagacaaggaaacagaagtcctttgagacactgaaa
ttgatagctcaaagcgtaacatttaaaagccacgcacttaagcttcttagacccgttact
gatcatatgaagaagcatctgacaccaaaagttaaagccaaattggaaaatatgctaact
aacatagctgctggttttgaaagcaatccttctgtcaaccaaactgatcttttagtcttc
atctatggcctcattgaagatggaataaaagttgaaaatggacagggtgaaagcacttca
ttgcttgatgcaaacaaacgttctaaagatgtctccagaggaaaaaatttgtcatgtcag
ataatacttgctaagtccccctgttcacaccttattatggtgtttgcacttaagcttctg
catgggtacatgaagaagatgcaacttggaaaagaacacgttccgttactatcaatgctt
gacccttttgtttccctgttaggaaactgcttgacttctaaatacgaggatgttttatca
ttaactcttagatgtctcactccattgctgagattgcctttgccatctgtcaaatctcaa
gctgataaaatcaagggagtagtgttaactattgctcagagttcagtagatccatgcaat
ccactagtagaatcatgtttgaggtcattaactgtgcttctgcgaaatgaacaagttaca
ctttccacagatcagctgcatttagtaattcaatttccattgtttgtcgatattcacaag
aatccatcttttgttgccctttcacttctaaaggcaattgttagttgcaaacttgttgtc
cctgagatttatgatcttgctattcgggtagctgaattgatggtgacaagtcaagttgaa
ccaatacggaaaaaatgcagcaaaatcttactacaatttctgcttgattaccgtctttca
gaaaagcgcttgcagcaacatttagattttttgctctccaatttaaggtatgagcattca
acgggaagagaagctgttttggagatgcttttcacaattgtcgttaaatttccaagaact
gtggtggatagtatttctcagacattatttgttcatttggtggcttgcttggctaatgat
caggataataatgttcggtctatgactggtgctgtaattaagcgtctaataggttgcata
agttctggtcctctccattctatacttgattacagtctatcttggtacttgggaggaaag
cagcaactatggagtgccgcagcacaggtattgggattattagttgaagctgtaaagaag
ggttttgaaagatatataagaactgtgttgccagttgccagaggcattctgcagtctgtt
gttgatgttactacgaatgatcaaatagacatttttgcagaaacaaccactaccttttgg
aaggaggcatattattcgttggtgatgctagagaaaatgatgcaccaattcccggagtta
ttctttgataaggattttgaggatatatgggaaatgattagtcatctgcttttgtacccg
catatgtggatacgtagcatctcaaatcgcctgatagcgtcatatttcactactgtgatt
gagaatagcagaagaaattctgaaaaatcgctaggagattattctcttatgaagccaagt
agactcttcttaattgctacttccctttgctgccagttgaagtcggacctcacagataaa
gatgctgatttgattgtccaaaaccttgtttttactatttgtggtttgcattctgtgatt
ggaaaagtggagaatacgaattcatgtccgttctggtctacgcttgaacaacccgagcaa
aggctttttctcaaagcattccagttgcttgactcaggaaaaggaagaagcatgctttta
cctcgaatgactggtgtattcgaccaagatgatgcttgtcccgatatctgttaccttctc
gtctcgaacttgctcaagcagatggggaaggttgctcttcaaacagatactatccagatg
actatagttttcaatgtcttccgcaatatatcatcacaaattggtgcagaagattgcgaa
cgatatgctttcgaaattttgctgcctttatatagagttcgtgaagggttttccggaaag
ttaattactgattcaatggtacagttggcacaagaagtttgtgataaaatacagaattgt
ttgggcattcagaaatttgtacaggtgtacagccagatcaagaagcgtctcaaggtcaaa
agggacaagaggaggcaagaagagaaacgcatggccgtcgttaatcctatgcgaaacgcg
aaaaggaaactacgaatagcagaaaaacaacgtgccagcaagagaaggaagataacaacg
atgagaatgtcgagacggatgatgtag
DBGET
integrated database retrieval system
