KEGG   Cucurbita maxima (winter squash): 111494305
Entry
111494305         CDS       T05246                                 
Name
(RefSeq) sm-like protein LSM1B
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
cmax  Cucurbita maxima (winter squash)
Pathway
cmax03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cmax00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    111494305
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmax03019]
    111494305
Messenger RNA biogenesis [BR:cmax03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     111494305
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     111494305
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 111494305
NCBI-ProteinID: XP_022999982
UniProt: A0A6J1KC94
LinkDB
Position
Unknown
AA seq 128 aa
MSWASAEDIYLSTSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDL
YSDIPLGLYVIRGENVVLLGELNMEKEELPPHMTHVSAVEIKRAQKAEREATDLKGTIRK
RLEFLDLD
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcgtgggcaagcgcggaagatatttacctttcaacttctcttgccaattaccttgac
aagaaggttcttgtactacttcgagatggtcgaaagctattaggaatcctccgttcattc
gatcaatttgcaaatgctgttcttgaaggatcctgtgaaagagtgattgttggtgacctt
tacagcgatattcctttaggtctctatgtaattcgaggcgaaaacgtcgttttactgggc
gagctgaacatggagaaagaggagctccctccacacatgactcatgtctctgctgtggag
attaaaagggctcaaaaagcagagagagaggctacagatcttaaagggacaattaggaaa
agactggagtttcttgatctggactaa

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