Cucurbita maxima (winter squash): 111494338
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Entry
111494338 CDS
T05246
Name
(RefSeq) transcription initiation factor TFIID subunit 12b-like
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111494338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmax03021
]
111494338
03036 Chromosome and associated proteins [BR:
cmax03036
]
111494338
Transcription machinery [BR:
cmax03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111494338
Coactivators
SAGA/TFTC/STAGA complex
111494338
Chromosome and associated proteins [BR:
cmax03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
111494338
STAGA complex
111494338
TFTC complex
111494338
SAGA complex
111494338
SLIK complex
111494338
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIID_20kDa
Histone
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
111494338
NCBI-ProteinID:
XP_023000030
UniProt:
A0A6J1KH79
LinkDB
All DBs
Position
Unknown
AA seq
728 aa
AA seq
DB search
MTCKNPTARSFNTRFFTRPLFLVPLSFSPSDLPVSLQILIQFLPGISFFIFAHREISMED
SIPSPRPVQPNPMDPSPPPPQQQPQVQPSTAAIPQNSSNSTNSSANPPIPAPSALAQSPS
IDQLHPLSQISSPPLSHISQNPQNQQQQQQLSPAVGLEYQQKPLQLQQQQQQQQQQLQQH
SQQMVQQPQNANAMTNFQIQQALQRSPSMSRLNQQQQQQQQQFGMMRQQSGLYSPMSFGG
SSTNQQQQLQQPNQQHQMGTGNLSRSALMGQGNHLPMLSGATAAAQYNLQSQLLASSKQK
AGLVQGAQFQSSNSHGQPLQGMQTMGMMGSMNLSSQLRANGLASYAQQRINQGQIRQQLS
QQSSLTSPQVQNLPRMSNLGFMNQQLSNLAQNGQPTMMQNSLQQQQWLKQMPSMSSPGSP
SYRLQQRHQQVLLQQQLASSSQLHQNSMSLNSQQFPQLVQQQPSMGHQQLHQQQQQQPQP
QQQQQQQQQQLQQLQQLQQQPLHQQQLLQQPSQLQSLQPALHQQQHSPRIAGLAAQKSLS
LTGSHPDATVSGTSTPGGSSSQGTEAATQVLGKRKIQDLVSQVDPLGKLEPEVEDLLLEI
ADDFIDSVTTFSCNLAKHRKSSTLESKDLLLHLEKNWQLNVPGYSSDKWKNRNKNLSSSD
THKKRLDMIRILKEASRVETNVNSPKDMVRQGVGMPMGTNNLMRPSSSSEQLLSQTTGSQ
LLQQMTRF
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgacgtgtaagaatcctactgctcgttctttcaacactcggttcttcacccgccctctc
ttcctcgttcctctttccttctccccgtcggatttacctgtttctctgcaaattctgatt
caatttctaccaggaattagcttcttcatctttgctcatcgtgaaatttcaatggaagac
agtattccttcgcctagaccggttcaaccgaaccctatggacccttccccaccgccgccg
cagcaacaaccgcaggttcaaccttcaaccgctgctattccgcagaattcatctaattca
acaaattcttcggcaaatcctcccattcctgcgccttctgcgcttgctcagtcgccctcg
attgaccagttacatccactatcgcaaatttcttctccccctctttcgcatatctctcaa
aatccgcaaaatcaacagcagcagcaacagctaagccctgcggttggattggagtaccaa
cagaagcctctacagctgcagcagcagcagcagcagcagcaacagcaactgcaacaacat
tcgcagcaaatggtgcaacagcctcagaatgcgaatgcgatgacaaatttccaaatacag
caggctctacaacggtccccttcaatgtccaggttgaaccagcagcagcaacagcagcag
cagcagtttgggatgatgagacaacaatcggggctttatagtccaatgagttttggtggg
tcttctacaaaccagcaacagcagctacaacagcctaaccaacaacaccaaatgggaacc
gggaatctgtcgcggtctgcattaatgggtcagggtaaccatttgcccatgttgtctggg
gcgactgctgctgcacagtataacttgcagtcacaattactggcttcgtcgaagcaaaaa
gctgggttagtccagggtgcacaatttcagtctagtaactctcatgggcaacctttgcaa
ggaatgcaaacaatggggatgatgggatcaatgaatttgagctcacaactaagagctaat
ggccttgcgtcatatgcccaacagagaataaaccaaggtcaaataaggcagcaattgtcc
caacaaagttcacttacatctccacaggttcagaacttaccgagaatgtcaaatcttgga
ttcatgaatcaacaattgagtaatttggctcagaatgggcagccaaccatgatgcagaac
tctttgcaacagcaacagtggctgaagcaaatgccatcgatgtctagccctggctcacca
tcatatcgtcttcaacagaggcatcaacaggtcctgttgcagcagcaactggcttcatct
agtcaattgcatcaaaactccatgtccttgaactctcaacaatttcctcagcttgtacag
caacagccgtccatgggacatcaacagcttcatcaacagcaacagcaacagccacagcca
cagcagcaacaacaacagcaacaacagcaactgcaacagctacaacagctacaacagcag
ccacttcatcagcaacaactacttcaacaaccatcacaactccaatctctgcaaccagca
ttgcatcagcagcagcattctcctaggatagctggacttgcggctcagaaatctctcagt
ttgactggatcacatccagatgccacagtatctggcactagtacacctgggggaagttca
agccaagggacagaagctgccactcaagtcctcggaaagagaaagatacaagatctggtt
tcacaggtagatccacttggaaagctggaacctgaagtcgaagatcttctcttggagatt
gctgatgattttattgattcggtgaccacattttcatgcaatctggcaaaacacagaaaa
tcttcaactttagaatccaaagatttattgctacacttagagaagaattggcagttaaac
gttcctggatattcaagtgacaagtggaagaatcgtaacaaaaatttatcatcaagtgat
actcacaagaaacgtctggacatgatacgcatactgaaggaagcatcccgtgtcgaaaca
aacgtaaatagccctaaagacatggtccgacaaggggttggaatgcccatgggtaccaac
aatctaatgaggccttcgtcaagctcagaacaactattgtcacagacaactggttcgcag
ctactgcagcaaatgacgaggttctga
DBGET
integrated database retrieval system
