Cucurbita maxima (winter squash): 111494724
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Entry
111494724 CDS
T05246
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 13
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
cmax
Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmax03009
]
111494724
Enzymes [BR:
cmax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111494724
Ribosome biogenesis [BR:
cmax03009
]
Eukaryotic type
Pre-60S particles
Helicases
111494724
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
111494724
NCBI-ProteinID:
XP_023000463
UniProt:
A0A6J1KIE8
LinkDB
All DBs
Position
Unknown
AA seq
851 aa
AA seq
DB search
MAEDPMQSISSQKRRPKRKRIQKDPELDRLDSLSWKSSIPRDDALSAFIGSNDLEGGFLS
LEEIDEAEYGLTIPKPETVKQKLTSTASKKSKKGEQDNVDGCGGASGDGEGSMNKEEGDN
MNMETNKKGKKEKKKKKKKKKNKVNNEAPTSEEDVGEIIGGSDGDGIETEVGDELDGGDD
LEMEKKLQKEKKETKDHGIDKEIKDEVEKDAVDETEYYAWNELRLHPLLMKSIYKLGFKE
PTAIQKACIPAAAYQGKDVVGAAETGSGKTLAFGLPILQRLLDEREKSGKKSEEEGVDAG
RYARRSLLRALIITPTRELAIQVTDHLKAVAVGTNIRVVPIVGGMSTEKQERLLRMRPEI
VVGTPGRLWELMSGGERHLVELQTLSFFVLDEADRMIENGHFRELQSIIDMLPAANCSTE
NSQNAENSSTIPSSQRKKRQTLVFSATLSLSSDFRKKLKRGSSRPSQAGGMDGLNSIEAL
SERAGIRPNVAIINLTNTSVLANNLEESFIECREEDKDAYLYYILSVYGKGRTIVFCTSI
AALRHISALLCIVGINVLTLHAQRQQRARLKAIDRFRGRENGILIATDVAARGLDIPGVR
TVVHYQLPHSAEVYVHRSGRTARASADGCSIALVSANETSKFATLCKSFSKESFQRFPVD
NSYMPEVLKRMSLARQIDKIMRKDSQEKAKRTWFERNAELVELVVDNDDSEDERANNHKQ
KKFGSMQLKKLQEELDKLLSHPLQPKSFSHRYLAGAGVSPLLQHQFEEMVKQNGTVQNTG
DNKRRKLAAIGQDLMEPLQALRTGGQQVHMDAKEMADKRKKVENLRRKKKEEKKRLRDQR
RNKRKQMKGKI
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggacccaatgcagtcgatatcttctcaaaagagaaggccaaagaggaagaga
atccagaaagacccagaattggaccgtctcgattcactctcatggaagtcatcaatcccg
agggacgacgccttgtctgctttcattggatccaacgatctcgaaggaggttttctttcg
cttgaggagattgacgaagctgagtatggcctgacaattccaaaacctgaaacagtgaaa
cagaagttgacatcaacagccagcaaaaagtcaaagaaaggtgagcaagacaatgttgat
ggctgtgggggtgcatcgggagatggtgagggtagcatgaataaggaagagggggacaat
atgaatatggaaacaaacaaaaaagggaagaaggagaagaagaagaaaaagaaaaagaag
aaaaacaaggtcaataatgaagccccaacaagtgaggaagatgtgggtgaaattataggt
ggcagtgatggtgatgggatcgagacagaggttggagatgaattggatggcggtgatgat
ttggagatggagaagaagctgcagaaggaaaaaaaagaaacaaaggatcatggaattgat
aaagaaatcaaggatgaagttgaaaaggatgcagttgatgaaactgaatattatgcatgg
aatgagttgagacttcaccctttgcttatgaaatcgatctacaaacttgggtttaaggaa
cctacagcgatccagaaagcttgtattccagctgctgcttaccaggggaaggatgttgtt
ggtgctgctgagacaggatctggaaaaacactagcttttggattgccaatcctacaacgt
ttattggacgaacgggaaaagtctggaaagaagtctgaagaagagggagtggatgcagga
agatatgctcgcagaagtcttctacgggctcttattattactcctactagagaacttgct
attcaggtaaccgatcatctcaaggcagtcgcagtgggtacaaatattagggtggttcca
atcgttggtgggatgtccactgaaaagcaggaaagacttttaaggatgaggccagagatt
gtagttggaacgccagggcggttgtgggaacttatgtcgggaggagaaaggcatcttgtt
gaattgcagacattgtctttctttgtactggatgaggctgataggatgatagaaaatggg
cactttcgtgagttgcagtccattattgatatgctccctgcggcaaattgttctacagaa
aattcacaaaatgcagaaaactcttcgaccattccaagttctcaaagaaagaaacggcaa
acacttgtgttttctgcaacattgtcactgtcttctgattttcgcaagaaattaaagcgt
ggatcatccagacctagtcaagcaggagggatggatggtttgaattctatagaagctctg
tctgagagagctgggattagacctaatgttgctattataaatctgactaacacatcggtt
ttggcaaataatcttgaagaatcatttatagaatgtagggaagaagacaaggatgcttat
ttgtattacattctgtctgtttatggaaaaggccgcacaattgtcttctgcacatccatt
gctgcactacgtcatatttctgctttattgtgcattgttggtatcaatgtcttgactctt
catgctcaaaggcagcaacgagctcgcttgaaggcaatcgatcgtttccgtggaagggaa
aatgggatactgattgccactgacgttgcagctagaggccttgatattcctggtgttcga
actgttgtccactatcaactaccacattcagctgaggtttacgttcatagaagtggaaga
acagccagagcttctgctgatggatgcagtatcgcattggtctctgccaatgaaacttcc
aaatttgctactctgtgcaaatctttctctaaggaaagcttccagcgatttcctgttgat
aattcatacatgccagaggttctaaaacgaatgtctcttgcacgccagatcgacaagatt
atgcggaaggattctcaagagaaggcaaaaagaacctggtttgagcggaatgcagagtta
gtggaattagtagtggataacgatgacagtgaagatgagagagcaaacaatcataagcag
aagaaatttggctccatgcagttaaagaaattgcaagaggagctcgacaagctgctttcc
caccccctgcaaccgaaatcattctcacaccgttatttggccggagctggggtctcacct
cttctgcaacatcaatttgaagagatggtcaagcagaacgggactgttcagaatacggga
gataacaaaaggaggaagttggctgctattggccaagatcttatggaaccacttcaagca
cttcgaaccggtggtcaacaggtacatatggatgcaaaagagatggctgataaacggaag
aaagtggagaaccttaggaggaagaaaaaagaggagaaaaaacgcttgcgtgatcagcga
agaaataaacggaaacaaatgaaaggcaagatttag
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