Cucurbita maxima (winter squash): 111495122
Help
Entry
111495122 CDS
T05246
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
111495122
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cmax04040
]
111495122
Ion channels [BR:
cmax04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
111495122
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
TMEM95
DUF6525
Motif
Other DBs
NCBI-GeneID:
111495122
NCBI-ProteinID:
XP_023000773
UniProt:
A0A6J1KKW9
LinkDB
All DBs
Position
Unknown
AA seq
775 aa
AA seq
DB search
MASFEKDDTPMLSNTGPPLLDEQLGSYFPSYASLARSSSLSIPTSSGIYVSDAKLVGYTG
PLRIERKSPFLEIGSKYTRRKPEKSSQSSPGVTESKTAEPLTDKFPSFKTNDESDWAIQH
FAGRNEHLIKSGQLGVCNDPFCITCPTYNSKSSKQKSSRMRGIFDPEFHKDLYGEGKGWA
VKFRSVWCFLLPYIPGVMNPHAKVVQQWNKFFVISCLLAIFLDPLFFFVLAVHFVKKCIF
INWPMTTTLVVFRSMTDFVYFLHMLLQFRLAYVAPETRVVGAGELVDHPKKIAKNYLKGN
FFIDVLVVLPLPQIIVFLILPNSLGTSGANHAKNLLRTAVIAQYIPRLYRFLPLLAGQSP
SGFVFETAWANFVINLLTFMLAGHIVGSLWYLFGLQGVNRCFRDACNRTGNTSCLDYIDC
GHGDEAGNHSPDLRRDQWKSNENATACFAKEGFDYGIYLQAVNLTTESNLLTRYTYSLFW
GFQQISTLAGNQVPSYYVYEVLFTMGIIGLGLLLFALLIGNMQIFLQALGRRRLEMSLRR
RDVEQWMEHRRLPESLRRKVRQAERYNWASTRGVNEERIFENLPEDLQRNIRRHLFRFVN
KVRIFALMDYEPILDAIRERLRQRTYIEGSEVFTAGDIIEKMVFIVRGKMESRVDGNGIV
VPLSEGDVCGEELLTWCLEHSSINRDMKRHQIPAQKLVSNRTVKCSTNVEAFSLRAADLE
EVTSMFSRFLRNPRVQGAIRYESPYWRYLAATRIQVAWRYRKRRLSRAQTSHSNY
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctttgaaaaagacgatacaccgatgctatcaaacactggtccaccattgtta
gatgaacaactgggttcttattttccttcgtatgcatcattggcccggagttcatcgcta
tcaattccaacttcttctgggatatatgtcagtgatgcaaagcttgttggttatactggt
cccttaagaattgaaagaaaaagtccattcctagagattggttcaaaatatactcgccgt
aaacctgaaaaatcttcacagtcaagtccaggtgtgactgaaagcaaaactgcagagcca
ttgacagacaaatttccttcgttcaagacgaatgacgagtctgattgggccattcaacac
tttgctggcagaaatgaacacttaataaagtctggccagctgggagtgtgcaatgatcct
ttctgtataacatgcccaacatataattccaaatcatcgaaacagaaaagctcaagaatg
agaggcatatttgaccctgagtttcacaaggatctctacggagaagggaaaggttgggca
gtgaagtttcggtctgtctggtgcttcttgcttccgtatattcctggagttatgaatcct
catgcaaaagttgttcagcaatggaacaagttttttgttatttcttgcttactggcgatc
ttcttggacccgttatttttcttcgtgcttgctgtccactttgttaagaagtgtatattt
attaattggccgatgaccacaacattggtggttttccgaagcatgaccgattttgtctat
ttcctacacatgcttctccagtttaggttggcatacgtggcaccagaaaccagagttgtt
ggagcaggcgaattagttgaccatccgaagaaaattgctaagaactaccttaaaggaaat
ttttttatagatgtgcttgttgttttaccgctgcctcagataatagtttttctaatcctg
ccaaactctttggggacatctggagcaaatcatgcaaaaaatctgttacgcactgcagtt
attgctcaatatattcccagactgtacaggtttctacctcttcttgctggtcagtctcca
agtggctttgtttttgagacagcatgggcaaattttgtcatcaatcttctcacctttatg
ttggctggtcatattgttgggtctctctggtatctctttgggcttcagggggtgaatcga
tgttttcgggatgcctgcaatcgcactggaaatacgtcctgcttagattatatagattgt
gggcatggggacgaagctggaaaccacagtccagatttacggcgagatcagtggaaaagt
aatgagaatgctacggcatgttttgctaaagaaggttttgattatggaatctaccttcag
gctgtaaatcttactacagaaagcaatttactcacgagatatacttactcattgttttgg
ggattccagcaaatcagtactctggccggaaaccaagttccaagctattatgtctatgaa
gtccttttcactatgggtattattgggcttggtctattgctgtttgctcttctcatcggg
aatatgcagatttttcttcaggctcttggaagaaggaggttggaaatgtcattaagacgt
cgtgatgttgagcagtggatggagcatcgtcgcttaccagagagtttaagaaggaaagta
cgacaggctgaaaggtacaattgggcttctacaagaggcgtaaatgaagagaggattttc
gaaaatttgcctgaggacctacaaagaaacataagacgacatctctttagatttgtcaac
aaggttcgcatttttgcactgatggactatgaacctattttagatgcaatacgtgagaga
ctgcgacaaaggacatacatagaaggaagtgaggtttttactgctggagatatcattgag
aagatggttttcattgtacgggggaaaatggagagccgtgtagatgggaacgggattgtg
gttcccttatctgaaggagatgtctgcggcgaggaacttctaacatggtgtcttgagcat
tcctccataaacagagatatgaagcgacatcaaattccagcacaaaaattggtcagcaac
cggacagtaaaatgctcgacgaatgttgaagcattttctctccgggctgcagaccttgaa
gaagtgaccagtatgttttctagattcctgcgaaacccacgtgttcaaggagccataagg
tatgaatcaccctactggaggtacctagcagcaacgcgtattcaagtagcttggaggtac
aggaaaaggcgtctatctcgagctcaaacctcccactctaactactaa
DBGET
integrated database retrieval system
