Cucurbita maxima (winter squash): 111495214
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Entry
111495214 CDS
T05246
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
111495214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmax04131
]
111495214
Membrane trafficking [BR:
cmax04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
111495214
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-Vps39_C
Clathrin
CNH
Vps39_1
TPR_Vps41
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
Motif
Other DBs
NCBI-GeneID:
111495214
NCBI-ProteinID:
XP_023000918
UniProt:
A0A6J1KP09
LinkDB
All DBs
Position
Unknown
AA seq
1012 aa
AA seq
DB search
MAEPERAVLEPLGEEFDISTHFRNSIRSLAVSPLSDSQTLIFAGTKSGALILFSATPESS
SFTALGSETTGLDAAPRVVSSSEGFSLVRSVAVSVSSIVYLNVLRGIDKVLVLCSDGFLY
IVDSLLLVPVKRLAGLKGVSLITKRIRSSESECSSLYGRADSNSGLGSPRQRLLQRLGSG
IRTNGLKIKESEWPQEESNCVFAALVGRRLILFEVVLGRRTGRNERGISDANESLLILKE
LQCTEGVSTMVWLNDSIIIGTASGYYLVSCVTGANSLIFKLPELSSPPCLKLLQKEWKVL
LLMDRVGITVNAYGQPVGGSLVFHDLPNSVAEISSYVVVASSGQLKLYHRNTGSCIQTIT
FNGNGIEPCIVADEEDGSGDVIAVAVTNKVMCYKKVPCDEQIKDLLKRKNFKEAISLAED
LECAGEMSKDMLYFVHAQIGFLLLFDLQFEEAVNHFLQSETMQPSEIFPFVMKDPNRWSL
LIPRNRYWAMHPPPAPFEDVIDDGLLAIQRATFLKKVGVETAVNEDFLLNPPSRSDLLES
AVKHIVRYFEASRQKELTSAVREGVDTLLMCLYRTLNSIDKMEELVSSANSCVVEELESL
LEDSGHLRTLAFLYASKGMSSKALAIWRILGRNYPSRLLKDSSMDEGTLDNNVVDISGKE
TAAAEASKILEESSDQELVLQHLGWIADINQHFATQILTSEKRSSQLSPDDIIRAIDPKK
VGILQRYIQWLIEEKESCDPHFHSLYALSLAKSAVEVESTQNLDSSSGTKLSDQRINSMF
EQPIRERLQIFLQSSDLYDPEEVLDLIEGSELWLEKAILYRKLGQEALVLWILALKLEDS
EAAEQYCAEIGRSDAYMQLLDMYLDPQNGKEPMFKAAVRLLHNHGEFLDPLRVLETLSPD
MPLQIASETILKVLRARVHHHRQGQILRSTSRALDLEARLARLEERSRHVQINDESLCDS
CHARFGTKLFAMYPDDTIVCYKCYRRQGESTSVTGRNFKQDILIKPGWLVMD
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcccgaaagggctgttcttgaaccactcggtgaggagttcgatatatccact
cattttcgtaattcaattagatctctcgccgtctcccctctctctgattcccagacccta
attttcgccggaactaaatctggggcacttattttattctctgcaactccggaatcttca
agttttaccgcacttggttcggaaacaaccggcttggatgctgctcccagagttgtctct
tcatcggaggggttttcacttgtgaggagtgttgcggttagcgtttcctcaattgtgtat
ttgaatgttcttcgtggaattgataaggttttagtactttgttccgatgggtttctgtat
attgttgattcacttcttttagtgccagtaaagaggttggccggtttgaaaggggtttct
ttgattacgaaacgaattaggagtagtgagtctgagtgttctagcttgtatgggagggcg
gatagtaattctggattagggagcccacgtcaaaggcttttgcagagactgggaagtgga
atacgaacaaatggcttgaaaatcaaggagtcagaatggccccaggaagaaagtaattgc
gtttttgcagctctagttggtagaaggttgattttatttgaagttgttctaggtcgtcga
actggtagaaacgagcgaggtattagtgatgccaatgagtcccttctaattttgaaagag
ttacagtgtactgaaggagtttcaacaatggtgtggcttaatgattcaataatcattgga
acggctagtggctattatcttgtttcatgtgttacaggagcgaatagtttaatattcaaa
ttaccagagttatcgagccctccatgccttaaattgttgcagaaagagtggaaagtgcta
ctattgatggatagagtaggcatcactgttaatgcgtacggtcaacccgttggtgggagt
ctcgtgtttcatgacctcccaaattctgttgctgagatatcttcgtatgtggttgttgca
agtagtgggcagctgaagttgtatcataggaatactggtagttgtattcaaactattact
tttaatggaaacggaattgagccttgcattgttgcggacgaggaagatggcagtggtgat
gttattgccgttgctgtgactaacaaggttatgtgctataaaaaagtgccttgtgatgaa
caaattaaagatttgctgaaaaggaagaattttaaggaagcaatctctttggctgaggac
cttgagtgtgcaggtgaaatgtccaaggatatgctatactttgttcatgctcaaattgga
tttctcttgctttttgacttgcaatttgaggaagctgtaaatcactttttgcaatctgag
acaatgcagccttctgaaatatttccatttgtgatgaaggacccaaatcgttggtccctg
ctgattcccagaaatcggtattgggcaatgcatcctccccctgctccttttgaagatgtt
atagacgatggcttgcttgccattcaaagagccacatttcttaaaaaagtaggagtagaa
actgctgtaaatgaggattttctcttgaatccaccaagtaggtcagatttgttggagtca
gccgtaaaacatattgtcaggtacttcgaggcgtcccgccaaaaagaattaacatcagcc
gttagagagggagttgacactctattaatgtgcctatatagaactttaaattctattgat
aagatggaagaactggtatcttcggcaaacagttgcgttgtggaggagttggaatcttta
ttagaggactctggacatttgcgtacacttgctttcctttatgcaagtaaagggatgagc
tcaaaggctctagctatttggcgtatcttgggaagaaattatccatctcgccttttgaag
gactcctctatggatgaaggtactctggataacaatgttgtagatatatctggtaaggaa
acggctgctgcagaggcatcaaagattctcgaggagtcgtctgatcaagaattggttctt
cagcaccttggatggattgcagacatcaaccagcattttgctactcagattttgacatca
gaaaaaagatcatctcaattgtcaccagatgacataataagggctattgatcccaagaag
gtaggaattcttcaaaggtatattcagtggttgatcgaagagaaagagtcttgtgatcct
cacttccactcactatatgctctctcattagccaaatcagcagttgaagtcgaaagtact
caaaaccttgattcatcatcaggcacaaaactttctgatcagagaattaactcaatgttt
gaacagccaatccgagaaaggttacagatctttttacagtcttcagatttgtatgatcca
gaagaggttttagatttgattgaaggatcagaattatggttggaaaaggctattctatac
cggaaactagggcaagaggcattggtcctctggattttagccttgaaacttgaagacagt
gaagctgctgagcagtactgtgctgaaattggaagatcagatgcctacatgcagttactg
gatatgtatttggatcctcaaaatggtaaggagcctatgtttaaagctgctgttcgtctt
ctccacaaccatggagaatttttggatcctttgcgagtcttagagactttatcgccagat
atgccgcttcaaattgcttcagaaacaatattaaaagtgttgagagctcgagttcatcat
caccgtcaaggacagattttacgtagtacctcccgtgctctagaccttgaggcgagattg
gccagattggaggaaagatcaaggcatgttcagatcaatgatgagagcctctgtgattct
tgtcatgcacgctttggaactaaattgttcgcaatgtaccccgatgacacaattgtctgt
tacaagtgctaccgtcgacagggcgagtcgacatcggtgactggccgcaacttcaaacaa
gatatcctgatcaaacctggctggctagtaatggattag
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