Cucurbita maxima (winter squash): 111495379
Help
Entry
111495379 CDS
T05246
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
cmax
Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmax03400
]
111495379
Enzymes [BR:
cmax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
111495379
DNA repair and recombination proteins [BR:
cmax03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
111495379
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
DExH14_plug
ResIII
Helicase_C
DEXQc_Suv3
T2SSE
AAA_19
Helicase_PWI
TBSV_P22
Motif
Other DBs
NCBI-GeneID:
111495379
NCBI-ProteinID:
XP_023001157
UniProt:
A0A6J1KFP9
LinkDB
All DBs
Position
Unknown
AA seq
2088 aa
AA seq
DB search
MLFQIPRLTSSLREPFDVDQAYLHRKLLLQNRKPTHSVTSSGESELARRIVYQWDEASFE
VRQAYKQFIAGVVGLVDREVPSEELGEVALTIYRLFGEQKEENDLNWTAKNKEELQKLIG
HAVSDARLQKVVSLAQKLFTLQPRDHATTFLAEKHVNKGDSEVEFGADLVFREPARFMVD
VSLENSDLLSKDFTAPTFYDRQHVHDDSINFDLSNERGKLNLSWLRDACDEITRKSTSQL
STDELAMAICRVLDSEKPGEEIAADLLDLVGDGAFEFVQDLISHRRELVNDIHHGLTIIK
SEKTNSSSQSRMPSYGTQVTIQTESERQIDKLRRKEEKRNKRGIDYGTDSDFSAISFSSL
VQASQRKSPFDDLIGSGEGANSLTVSALPQGTQRKHFKGYEEVIIPPIPAAQMKPGEKLI
EITELDDFAQAAFCGFKYLNRIQSRIFDTVYNTNENILVCAPTGAGKTNIAMISILHEIS
QHFKDGYLHKDEFKIVYVAPMKALAAEVTSTFSHRLSPLNVIVRELTGDMQLSKNELEET
QMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVESTQ
SMIRIVGLSATLPNYLEVAQFLRVSPGTGLFFFDSSYRPVPLAQQYIGISEHNFAARNEL
LNEICYKKVVDSLKHGHQAMVFVHSRKDTAKTAEKLVELGRKYDDLELFKNDAHPQFGII
KKEVIKSRNKDLVELFDHGIGVHHAGMLRSDRGLTEKLFSDGLLKVLVCTATLAWGVNLP
AHTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAHYLRL
LTSQLPIESQFIGSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRLNPLAYGIGWDE
VVADPSLSSKQRDLITDAARALDKSKMMRFDEKSGNFYCTELGRIASHFYIQYSSVETYN
EMLRRHMNDSEIIDMVAHSSEFENIVVRDEEQSELEMSVRTSCPLEVKGGPSNKHGKISI
LIQLYISRGSIDSFSLVSDAAYISASLARIMRALFEICLRRGWCEMTLFMLEYCKAVDRR
IWPHQHPLRQFDKDLSLDILRKLEEREADLDRLQEMQEKDIGALIRYVPGGRLVKQYLGY
FPLIQLSATVSPITRTVLKVEVLITADFTWKDRFHGGSQRWWILVEDTENDHIYHSELFT
LAKKKVREPQKLSFTVPIFEPHPPQYYIHAVSDSWLQAEAFYTISFQNLALPEASTSHTE
LLDLKPLPITALGNRSYESLYKFSHFNPIQTQIFHMLYHTDDNILLGAPTGSGKTISAEL
AMLRLFNTQPDMKVVYIAPLKAIVRERMNDWKNCLVSRLHKKMVEMTGDYTPDLMALLSA
DIIISTPEKWDGISRNWHSRSYVTKVGLMILDEIHLLGADRGPILEVIVSRMRYISSQTE
RKVRFVGLSTALANASNLGDWLGVGENGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMNSM
NKPTYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDEHPRQFINMAEEELQMILC
QVIDQNLRHTLQFGIGLHHAGLNDGDRSMVEELFANNKIQVLVCTSTLAWGVNLPAHLVI
IKGTEYYDGKSKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPF
PVESSLKEQLHDHINAEIVSGTICHKEDAVHYLTWTYLFRRLMVNPAYYGLDSMEPETLS
SYLSSLVQSTFEDLEDSGCITMDENSVEPTMLGSIASQYYLSYITLSMFGSNIGPDTSLE
VFLHILSAASEYDELPVRHNEENYNAALSERVRYAVDKDRLDDPHVKTNLLFQAHFSQLE
LPISDYITDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMRLLQMVMQGLWFDVDSALW
MLPCMNDDLASSLKKSGYLTLQQLLDLHKTTLQNLIGNFPAAKLSQDLQNFPRVQMKIKL
QRRDEDVEKPPSLHIRLEKISSRKNRSRAYAPRFPKIKDEAWWLILGNTSTSELYAIKRV
SFSDRLVTTMQLPPKRTDFQEMKLILISDCYLGYEQEYSIKEVISGSS
NT seq
6267 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttcagattccccgattgaccagctccctcagggagccattcgatgtcgaccag
gcgtatctccatcgcaagctccttcttcagaatcgcaaaccgacccattctgtaacttca
tctggcgagtcagagcttgcacggaggatagtgtatcaatgggatgaagcatcctttgaa
gttcgacaagcctataagcagttcattgcgggagttgttggattggtggacagagaagta
ccatcggaggagcttggcgaggtagcgctgactatttatcgcctttttggagagcaaaaa
gaagagaatgatctcaactggactgctaaaaacaaagaagaactgcaaaagcttattggc
catgcagtttcagatgctaggctgcagaaagttgtttctctagctcagaaactatttact
ttgcagccaagggatcatgcaactacatttctggcagagaagcatgttaataagggtgac
tccgaagtggagtttggcgctgatcttgtgtttagagaacctgctaggtttatggtggat
gtgtcactagaaaattcagatttactgagcaaggattttactgcacctacattttatgac
agacaacatgtgcatgatgattccattaactttgatctctctaatgaaagaggaaagtta
aatttgagttggttgagggatgcatgtgatgagataaccagaaaaagtacctcacaactt
tccactgatgaacttgcaatggctatttgccgagtccttgattcagaaaaacctggcgag
gagatagctgcagatctattggatcttgttggtgatggagcatttgagtttgttcaagat
cttatatcacaccgaagggaacttgtaaatgatattcatcacgggttaacaataataaaa
tccgaaaaaacgaattcaagctctcaatcacgaatgcctagctatggaactcaggttact
attcaaacagagtcagaaagacaaattgataagcttcgacgtaaagaggaaaagcgaaat
aaacgaggaattgactatggtactgatagtgatttctctgctataagcttttcttctcta
gttcaagcaagtcaaaggaaaagtccatttgacgatcttattggttctggtgagggcgct
aactcccttactgttagtgcccttcctcaaggaacacaaagaaagcattttaagggatat
gaggaggttattatccccccaatcccagcagcacaaatgaaacctggagaaaagctgatt
gaaataacggagttggatgattttgctcaagctgctttttgtggattcaaatacttaaat
cgtatacagagtcgcatttttgacactgtttataacaccaatgagaatatactagtctgt
gctcccacaggagctgggaaaactaatatagccatgatctccattctccacgagatttca
cagcatttcaaggatggatatttgcataaagatgaatttaagatagtttatgttgctcct
atgaaggcgctggctgcagaggtcacatctacttttagccatcgcttatctcccttgaat
gttattgtaagagaactaactggagacatgcaactttcgaagaatgaacttgaagaaact
cagatgatagtgacaacacctgagaaatgggatgtcataactcgcaaaagcagcgatatg
tcactgtcgatgttagtcaaactcttaattattgatgaggtacatcttctaaatgatgac
cgagggcctgtaattgaggcactagttgcacgaacgcttcgtcaggtggagtcaacacaa
tcaatgatacgtattgttggcctttcagccaccctgcctaactacttagaggttgcacag
tttcttagagtgagtcctggaacaggacttttcttctttgattctagctatcgtcctgtg
cctcttgcacaacaatatattggtatcagcgagcacaactttgcagctcgcaatgaattg
ttaaatgaaatatgctataagaaggttgttgattcattgaagcatgggcatcaagcaatg
gtgtttgttcattcccgaaaggacacagcaaaaacagctgagaaattggtcgaacttggc
cgaaagtatgatgatcttgagctatttaagaatgatgcgcacccacagtttggtattatc
aagaaagaagtcatcaaatccaggaataaagatctcgtagaactttttgatcatgggatt
ggtgtacatcatgctggaatgctacgttctgatagaggtttaactgaaaagcttttctct
gatggactattgaaggttcttgtttgtacagccaccttagcatggggtgtaaatcttccc
gctcatacggttgttataaagggcacccaattatatgatccaaaagctggtggatggcga
gatttgggtatgcttgatgtcatgcagatttttggacgagctgggagacctcagtttgac
aaaagtggtgaaggcatcataattacatctcacgataaacttgcgcattatttgcgattg
ctcacaagtcagctccctatagagagtcagtttattggttccttgaaagataatttgaat
gcggaggttgcactgggtactgtaacgaatgtaaaggaagcttgtgcgtggcttggatat
acatatctctttataaggatgagactaaatcctctggcatatggtattggatgggatgag
gtcgtggccgatccatctttgagttcaaagcaaagagatctcataacagatgctgcacgt
gcgcttgacaaatcaaagatgatgcgttttgatgaaaaaagtggcaacttttattgtaca
gagctgggccgcattgccagccacttctatattcagtattccagtgttgagacgtataac
gagatgttgcgacgtcacatgaatgacagtgagattattgacatggttgctcattcttct
gagtttgaaaatattgttgttcgagatgaggagcagagtgagctggagatgtcagtacga
acatcatgtcccttagaagttaagggtggcccatcaaataaacatggaaaaatttccatc
cttattcagttgtacatttccagaggttccatcgattccttctcgctagtctctgatgct
gcttatataagtgctagcttggctcgaattatgcgagctctatttgaaatatgtttgaga
aggggttggtgtgaaatgacattgttcatgttggaatactgcaaagctgttgatcgtcga
atatggccacaccaacatcctctaagacaatttgacaaggatctttctttagatatattg
cgtaagcttgaggagcgagaggccgacctggatcgtctgcaagagatgcaggaaaaagac
ataggagcactgatccgttatgtacctggtggaagattggttaagcagtatttaggatat
tttccactcatccagttatcagcaactgtcagtccaataacaagaacagtcctaaaggtt
gaggtgctcataacggccgattttacatggaaagatcgttttcatggtggttcacaacgc
tggtggatactagttgaggacacggagaatgaccacatctatcactctgaacttttcacg
ctggcaaagaagaaagttagagagcctcaaaagctttcctttactgtcccaatatttgag
ccacatccacctcaatattatattcatgccgtttctgactcctggctgcaagcagaagca
ttttacactatatctttccaaaatttagcattgccggaggccagtacgtcgcacactgag
ctcctagatttgaaacctcttccaataactgcccttggtaacagaagttacgaatccttg
tataaattttcacattttaatccaatacaaacacagatttttcatatgttatatcataca
gatgataacattctgttgggtgctcccactgggagtggaaaaaccatatctgctgaactt
gctatgcttcgcctcttcaatactcagcctgatatgaaggttgtctacatagcacctttg
aaggccattgttcgtgaaagaatgaatgactggaaaaattgtcttgtttctcggcttcac
aaaaaaatggttgaaatgacgggagattatacccctgatttgatggcacttttgtcagct
gatattataatatcaacccctgaaaagtgggatggtattagtcgaaattggcatagccga
agttatgttacaaaggttggactaatgattttggatgagatccacttattgggagcagat
cgaggacccattcttgaggttattgtttcaaggatgaggtatatatcatcacagactgag
agaaaagttagatttgtaggcctttcaactgctttagcgaacgcaagcaatttgggtgac
tggttgggtgttggagaaaatggacttttcaatttcaaaccaagcgtaaggccagtgcct
cttgaagttcatatccagggatatcctggaaagttttactgccctaggatgaacagtatg
aataaaccaacttatgctgccatctgcacccattccccaaccaagccagttcttatattc
gtctcatctcgtcgtcagacaagactcacagcattggatcttattcagtttgcagcttca
gatgagcatccaaggcaatttattaatatggccgaagaagagcttcagatgatcctttgt
caagttattgatcaaaatctcaggcacaccttgcaatttggtatcgggctacaccatgca
ggtctaaatgatggggataggtctatggttgaggagctgtttgcaaacaacaaaattcag
gtattggtttgtactagcacattggcttggggtgtgaaccttcctgcacatctagttatt
atcaagggaacagaatattatgatggaaaatccaagagatacgttgattttccaatcaca
gatattctgcaaatgatgggtcgtgcaggtcgaccacagtatgatcaacatggaaaagca
gttattcttgttcatgaacccaaaaagagcttttataaaaagtttttgtacgaaccattc
cctgttgagagcagtctgaaggagcagttgcatgaccatatcaatgctgagatagtttcg
ggcaccatttgtcataaagaggatgcagtgcactatcttacctggacatatttgtttcgt
aggctgatggtaaatcctgcttactatggacttgatagcatggaacctgaaactctaagt
tcgtacttatctagtttagtacaaagtacatttgaggatcttgaggatagtggatgcata
acgatggatgaaaacagtgtggagccaacgatgctgggctcaatagcatctcagtattac
ctcagctacattactttatcaatgtttggctcaaatataggtccagatacgtcacttgaa
gtatttttgcatatcctttctgctgcctctgaatatgatgagcttcctgtgcggcataat
gaggaaaattacaatgctgctctatccgagagagttcgatatgcagtggacaaagatcga
cttgatgatccacatgtgaagacaaatttactttttcaggcacatttttctcagttggaa
ttaccaatcagtgactacattaccgacttaaaatcggtgttggatcaaagtatacgcatt
attcaggcaatgattgatatatgtgccaacagtggatggctgtcaagctcgattacttgc
atgcgtctgttgcaaatggtcatgcagggcttgtggtttgatgtagattctgcattgtgg
atgctgccatgcatgaacgatgaccttgcaagttcacttaaaaaatcgggatatcttact
ctgcagcaactgttggatcttcataagacaactttgcaaaatttgattggaaactttcct
gcagcaaaattatctcaggatttgcagaattttcctcgtgtccaaatgaagataaaactt
caaaggagggatgaggacgttgaaaaacctccctctcttcacataagactggagaagata
agttcgaggaaaaaccgatccagggcatatgcaccacgctttcccaagataaaagatgaa
gcatggtggctcatacttggtaacacctctacgtcggaactgtatgctataaagagagtt
tctttctctgatcgcctggtcacaaccatgcagttgcctccaaaaagaactgatttccag
gaaatgaagttgattttgatctcagattgttatcttggttatgagcaagaatactccatt
aaagaagtgataagtggaagcagttga
DBGET
integrated database retrieval system
