Cucurbita maxima (winter squash): 111495456
Help
Entry
111495456 CDS
T05246
Name
(RefSeq) probable pectate lyase 16
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax00040
Pentose and glucuronate interconversions
cmax01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111495456
Enzymes [BR:
cmax01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
111495456
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
TetR_C_1
T4SS_TraI
Motif
Other DBs
NCBI-GeneID:
111495456
NCBI-ProteinID:
XP_023001281
UniProt:
A0A6J1KI65
LinkDB
All DBs
Position
Unknown
AA seq
381 aa
AA seq
DB search
MASSSSHLLLTLLIILSLIQSSHQDYYTPTKNNMNIIDSCWRSSSNWAKNRQALANCAVG
YGKDAIGGKFGTIYVVTDPSDNPSNPKYGTLRYGVIQNKPLWVVFAKSMVIVLKNELMIN
SFKTIDGRGANVEIAYGPCITVQRVSHVIIHGISIHDCKPAKAGLVRDSVTHVGKRRGSD
GDAISIFGSSHVWIDHCYLARSTDGLIDIIHASTAVTVSNNYFSQHDKVMLLGHNDGFTD
DKIMRVTIVFNRFGAGLIERMPRVRFGYTHVANNRYDEWKMYAIGGSANPTIFSEGNYFV
APKNSNAKQVTKREVNKGWNNWKWRSSRDVFLNGAYFVQSGWGSCSPFYTRAQSFPVAPG
SKVPALTANSGPLRCSIGKPC
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctcatcatcccaccttcttctaactcttctcatcattctctcactcatccaa
tcctcccatcaagattactacaccccaaccaagaacaacatgaacataatcgactcttgc
tggcgttcatcctccaattgggccaaaaaccgccaagccttagccaactgcgccgtgggc
tacggcaaggacgcaattggaggcaaatttggcaccatttacgtagtcaccgacccatct
gacaacccttcaaaccccaaatatggaacgttgcgttatggtgtgattcaaaataagcca
ctttgggttgtgtttgctaagagcatggttattgtgttgaagaatgagctgatgataaat
agtttcaagaccattgatggacgtggcgctaatgtggagattgcttatgggccttgcatt
acggtgcaaagggttagccatgttattatacatggaattagtatccatgattgtaagcct
gccaaagctgggcttgttagagacagtgtcacgcatgttggcaaacgtagaggctctgat
ggtgatgccatttctatatttggttcttcccatgtttggattgatcattgttacttagct
cgatccactgatggacttattgatatcattcatgcttccaccgctgttactgtctcaaat
aactacttctcccagcatgacaaggtgatgctgctcggacataatgatgggttcaccgat
gataaaattatgagggtcaccattgtctttaaccgcttcggagctggccttatcgagagg
atgccgagggttaggttcggttacacccacgttgccaacaatcgatacgacgagtggaaa
atgtacgcaataggtggaagtgcaaaccccacaatcttcagtgaaggaaactacttcgta
gctcccaagaactcaaatgccaaacaggtaacaaaaagagaggtcaacaaagggtggaat
aactggaaatggagatcctcaagagacgtgttcttgaatggcgcttactttgtgcaatct
gggtggggaagttgcagcccattctacacaagggctcagtcctttccagtggctccaggc
tccaaggttccagctttgactgcaaattctgggccacttcgttgctccattggcaaacct
tgctga
DBGET
integrated database retrieval system