Cucurbita maxima (winter squash): 111496114
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Entry
111496114 CDS
T05246
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
111496114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmax03021
]
111496114
Enzymes [BR:
cmax01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
111496114
Transcription machinery [BR:
cmax03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
111496114
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
111496114
NCBI-ProteinID:
XP_023002176
UniProt:
A0A6J1KKK5
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MVVKFSENQDYEALRELFRHHIESYDHLVDAGLETLMNSIKPVEIYDSFTDRKLRIWLGK
TEFYPPQKERNLRTMREALLPSECRQAKISYTGKLMADVCFQYDEKAVIREKFNFGQFPV
MLKSKLCHLRGLDPKKLVSYKEEASEMGGYFIMNGLERVVRLLIAPKRNYPMSMVRNSFA
DRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVKGKEYLLPIGVVLKALIDT
TDHEIFASLTSCYSDKHEKGKGAVGTQLVGERAKIILDEVRDLALFDHRQCLEHIGQHFQ
PVMEGMEKEKMSTIADAVFKNYIFVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSL
QNQDVLLPGQLITIYMKEKLEDWLQKVKKLLQDELSDSSKNFDFCSLADVKKVMDKNPSK
QISSAIDNLLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFISHFRAVHRGASFAGLRTT
TVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFFKIRASILSVL
IAVGMIPSLPKLVQMGPPDVLNVILDGRIVGYISSGEVEKVVAHLRQLKVLSPHVIPEDL
EVGYVPLSICGAYPGLFLFTSPSRFVRPVRNLSISSEENQNIELIGPFEQVFMEIRCPDG
GDGGRKDEFPATHEEIHPTGMLSVVGNLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIQF
RADQKLYHLQTPQTPIVRTSTYMKYNIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVE
RGMYHGQIYQTETIDLSEQSSRSSRSQKLFRRSNIDKSVRSHIDSDGLPYVGQMIKPDEP
YCSIYDEVAGTTRNMKLKGSEPVFVDYVSVDVKNKKHPQKVNIRFRHPRNPVIGDKFSSR
HGQKGVCSQLWPDVDMPFSGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLNGEFI
NATPFKSSVKKRNAGDEESKTESLVDELGSTLVKKGFNYHGVEVLYSGVYGTELTCEIFI
GPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRKKGGGIRFGEMERDSMLAHGASYLL
HDRLHTCSDHHIADVCSLCGSILTSTLVQPQKRAVREIGGLPPGKAPKRVICHACKTSKG
METVAMPYVFKYLAAELAAMNIRMTLQLSNAAGA
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgaaattttccgagaaccaagactatgaggcgttgcgcgagctgttcagacac
catatagaatcgtatgatcacctcgtcgatgcgggattggagactctcatgaacagcatc
aaacccgtcgaaatttacgactccttcaccgacagaaagcttagaatttggttgggtaag
actgagttctacccaccacagaaggagcgcaatttgagaacaatgcgagaagctctgctt
ccttctgaatgtaggcaagctaaaatttcatacaccggcaagttgatggcagatgtttgt
tttcaatacgatgaaaaagctgtcataagagagaaatttaattttgggcaattcccagta
atgctgaagtcaaagctttgtcacttgagaggtcttgatcccaagaagctagtatcctac
aaagaagaggcatcagaaatgggtggttatttcattatgaatgggctggagagagttgtt
cggcttttgatagcaccaaaaagaaactacccgatgagtatggtgaggaattcatttgct
gatcgacgggaaggttataccgataaagcagtggttataaggtgcgtaagagaagatcaa
tcttcagtaacagtcaaattatattatcttaggaatggaagtgccagacttggcttttgg
gttaagggaaaggagtacttgcttcccataggggttgtcctgaaggccctaattgacaca
actgaccatgaaatatttgcaagtctgacaagctgttatagtgataaacacgaaaagggt
aagggtgctgttggaactcagcttgttggtgaaagggcaaaaattattcttgatgaagtt
cgagacctggcactttttgatcatcgtcaatgtctagagcatataggacaacacttccag
ccagtcatggaggggatggaaaaagaaaaaatgtccactattgcagatgcagttttcaaa
aactacatatttgttcacctcgacaacaattatgacaagttcaatctcctcatttttatg
gcgcagaaacttttctcccttatagatcagacgtctgtacctgacaatcctgattccttg
caaaaccaagacgttctgctacctggtcaactgattactatttatatgaaggagaaacta
gaagactggttgcaaaaggtgaaaaagcttcttcaagatgaacttagcgattccagcaaa
aattttgatttctgcagcttagctgatgtcaagaaagtcatggacaagaatccatcaaag
cagattagttcagctattgataatttgctgaaaaccggaagactggttacacaaacgggc
ctagatctgcagcagagggcaggctttacagttcaggcagaacgacttaattttttgcgc
tttatatctcattttcgcgctgttcatcgtggagcttcatttgctggacttcgcaccaca
acagtgcggaaattgctacctgagtcctggggttttctttgtccagtacacactcctgat
ggtgaaccatgtggcttgttgaatcatttaaccagcacttgcagaattacatcatatttc
aattctcaaggaaaagttagagacttcttcaaaataagggcgtctattttgagtgttcta
attgcagttggaatgataccgtcactaccaaagcttgttcaaatgggtcctcctgatgtt
cttaatgttattttagacggtcgcatagttggttatatatcatctggtgaagtagagaaa
gttgttgctcatttacgacaattaaaagttttatctccccatgtgattcctgaagatctg
gaagttggatatgtaccattgagtatatgtggagcatatcctggtttattccttttcaca
tctccttctagatttgttcgaccagttagaaatctttcaatatcttctgaggaaaatcaa
aatatcgaactcattgggccatttgaacaggtatttatggaaataagatgtcctgatggg
ggtgatggtggcaggaaagatgagtttcctgcgacacatgaagaaatccatccaactggg
atgctcagtgtggttgggaatcttaccccttggtctgatcacaatcagagcccgcgtaat
atgtaccaatgccagatggcaaaacaaacaatggcattctctctgcaagctattcagttc
cgtgcagatcaaaagctataccatcttcagactcctcaaacccctatcgttcgtacaagt
acatatatgaaatacaacatagatgaatatccaactgggacaaatgcaatagtggcagtg
ttggcatatactggttatgacatggaggatgcaatgattttgaacaagtcctctgtggag
cgtggaatgtaccatggacaaatttatcagacagaaaccattgacttgtctgagcagagc
agtagatcaagtcgcagccaaaagttgtttaggaggagtaatatagacaaatctgtgcgg
tctcatatagattcggatgggcttccttatgttggtcagatgataaaaccagatgagccc
tattgtagcatttatgatgaggtggcaggcacaactagaaacatgaaacttaaaggttca
gaacctgtatttgttgattatgtgtctgttgatgtaaagaataagaagcaccctcaaaag
gtgaatatacgcttccgacatccccgaaatccagtgattggagataaatttagtagtaga
catgggcagaaaggtgtttgctcccaactatggccagatgttgatatgccattttctggt
gctacaggaatgcgtcccgatttgattatcaatccacatgcttttccttcgagaatgaca
attgcaatgttaatggagtctgtcgctgctaagggaggctgtttaaatggagaatttatc
aatgcgacgccatttaagagttcggtaaagaaaagaaatgctggagatgaagagtctaaa
actgaatcacttgttgatgaacttggctccacattagttaaaaagggattcaattaccat
ggtgttgaggtattgtacagtggggtttatggaacagagctaacatgtgaaatttttatt
ggacccgtatattatcagcgtcttcggcacatggtttctgataaatatcaggttcgttcg
accggaactgtagatcaagtcactcgacagcctatcaaaggtagaaaaaaaggtggtggc
atacgttttggtgaaatggagcgtgactcaatgctggcacatggagcatcttacttatta
catgataggcttcatacatgttctgatcatcacattgctgatgtgtgttcgctttgcggt
agcattcttacatcaactttagtccagccccagaagcgtgccgtgcgcgaaattggtggt
cttcccccagggaaggctcctaaaagggttatatgtcatgcttgcaaaacaagtaaaggt
atggagacagtggcaatgccttatgtcttcaagtacctggcagcagagttggctgcaatg
aacataagaatgactctccagctaagcaatgcagcaggagcctga
DBGET
integrated database retrieval system
