Cucurbita maxima (winter squash): 111496426
Help
Entry
111496426 CDS
T05246
Name
(RefSeq) protein SMG7-like
KO
K14409
protein SMG7
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111496426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmax03019
]
111496426
Messenger RNA biogenesis [BR:
cmax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
111496426
mRNA cycle factors
Common to processing body (P body) and stress granule
111496426
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Motif
Other DBs
NCBI-GeneID:
111496426
NCBI-ProteinID:
XP_023002626
UniProt:
A0A6J1KLT5
LinkDB
All DBs
Position
Unknown
AA seq
978 aa
AA seq
DB search
MAKMSASASASWERAQCLYEKNIELENRCRKSAQARIPSDSNAWQQIRENYETIILEDYA
FSEQHNIEYALWQLHYKRIEELRAHFSAALASAGSNNSQGVPTRLDRVPKIRLQFKTFLS
EATGFYHDLILKIRAKYGLPLGFFSEDADNRMATDKDGKKPADIKKGLISCHRCLIYLGD
LARYKVLYGEGDSKNREYTAASSYYLQAASLCPSSGNPHHQLAILASYSGDELVAVYRYF
RSLAVDSPFSTARDNLIVAFEKNRQSYSQLSGAAKTSVVKETPIRFSGKGRKGEVKLATK
DSSAEPPKESVLSPQEPFKSFCIRFVRLNGILFTRTSLETFTEVLSLVNSSFSELLSSGP
EEELLFGTVAAENSLIVVRIIAILIFTVHNVNKETEGQTYSEIVQRAVLIQNAHIAVFEL
MGSILDRCSQLCDPLSSFFLPALLVLVEWLACCPEIAASSEVDDKQATTRSKFWNRCISF
FNKLLSSGCVSLDDEDETCFFNLSKYEEGETDNRLALWEDLELRGFLPLLPAQTILDFSR
KHSGSDGNKEKVARVKRILAAGKALANIVKIDQEPIYYNSKVKRFCTGIEPQVPNDFVIP
SSSTMMPGPGNAMQGTQVEKTNNLAVGKSSSQLVLEGEEDDEVIVFKPLVAEKRIEMADA
LRSGYEGLQLARNSSGGDLRSYGGMTTSSEDIHLSSGFESSSQAPMTAANINTLHWQTIQ
SNASKWPLEQKACLVDSLQTLRLLENGHGMKSDLQNDISMFNPAVHSMPVKQTVSMNNDV
FYNDKKPLGAQVQSRNDGPVSFGGVIDPMTTGVFSSLQSGLRKHPVSRPVRHLGPPPGFN
HVTTKHANESLPGSEFRSENQTMDDYSWLDGYQLPSSTKDSANATHLTSHMNAQQIGGSN
VLSAAISFPFPGKQVPNVQSPIGKQKGWPDFQVLENLKQHNEQHLQPHQQLVNGGSQLFT
PLPEQYPGQSIWTGRYFM
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaatgtctgcttccgcttctgcatcatgggagcgggctcaatgcctttatgaa
aagaatattgagttggagaatcggtgtagaaagtcagctcaggctcgaattccttcagat
tccaatgcatggcaacaaatacgggaaaattatgaaacaataatccttgaggattatgct
ttctctgaacagcacaatattgaatatgccttgtggcaactgcattacaagcgaattgag
gagctgagagcacatttcagtgctgctttggcttctgctggttctaacaattctcaaggc
gtgcccacaaggcttgacagagttccaaaaataagattgcagttcaaaacatttctttca
gaagctactggattttaccatgatttaatattgaaaatcagagcaaaatatgggcttcct
ttgggttttttctcggaggatgcagacaaccgtatggctacagataaagatggaaagaag
cctgctgacataaagaaaggcctcatttcttgtcatcgttgtttgatatacttgggtgat
cttgcacgctacaaagtgttatatggggaaggtgattcaaaaaatcgggagtatactgca
gcctcaagttactatctgcaagcagcatcactttgtccatctagtggcaatcctcatcat
cagcttgctatattagcttcatactcaggagatgagctggttgctgtttatcgatatttc
cggagtctggcagttgattctccattttctactgccagagataatttgattgttgcattt
gagaagaaccgtcagagctattctcagctgtcaggggctgctaaaacttctgtggtgaag
gaaacacctattcgatttagtggaaaaggacggaaaggagaagtaaagcttgcaactaaa
gattctagtgctgaacccccaaaggagagtgtgctatctccacaggagccatttaaatcc
ttttgcattagatttgttcgtctaaatggaattcttttcacgcgcacgagcctagagacg
tttacagaggttctctcattggttaatagtagtttctcagaacttttgtcttctggacct
gaagaggaactgctttttggaacagttgctgctgagaatagtctcatcgtagttagaatt
attgcaattcttatattcacagttcacaatgtgaataaagaaactgaaggtcagacgtac
tcagaaattgtacaacgggccgttttgatacagaatgcacatattgcagtttttgagttg
atgggttctattcttgatagatgttcccagttgtgtgatcctttatcaagtttttttctg
cctgctcttctagttcttgttgaatggttggcatgttgcccggaaattgcagcaagcagt
gaagttgatgataaacaggctactactagatcaaaattttggaaccgttgcatctccttc
ttcaataagcttttgtctagtggttgtgtgtctttagatgatgaggatgaaacttgcttt
tttaacctcagtaagtatgaagagggcgaaactgataatcggcttgcattatgggaggat
cttgaattaaggggattcttgccacttcttcctgcacagactatattggatttttcaagg
aagcattctggaagtgatggcaataaagaaaaagttgctcgcgttaaaaggattctggct
gcagggaaggctttagctaatatagtcaagattgatcaagaaccaatatactacaattct
aaggtgaaaaggttttgtactggtattgaacctcaagtgccaaatgattttgtcattcca
tcgtcttctaccatgatgcctggtccaggcaatgcaatgcaaggaactcaagtagagaaa
acaaataacttggcagttgggaagtcaagttctcagctagttttggaaggtgaagaggat
gatgaagtaatagtctttaagcctctagttgctgagaagcgaattgaaatggctgatgca
ttgcggtcaggttatgagggtttgcaacttgcgagaaattcttctgggggtgatctgaga
tcctatggtggcatgacaacctcttctgaggatattcacctgtcaagtggttttgaatca
agttctcaagcacctatgactgctgctaatattaacactctccattggcaaacaattcag
tcaaatgcttctaaatggcctcttgaacagaaagcttgtcttgttgacagcttgcaaact
ttgaggttattggagaatgggcatgggatgaaatctgatcttcagaatgatataagcatg
tttaatcctgcagttcactcgatgcctgtcaaacaaactgttagcatgaataatgatgtc
ttttacaatgacaaaaagcccctaggagctcaagtacaatctaggaatgatggtcctgtc
tcatttggaggtgttatcgacccaatgactacaggtgtattttctagccttcaatcaggg
ttgagaaaacatccagtaagtcgaccagttaggcatcttggacctcctcctggtttcaat
cacgttactactaagcatgctaatgaatcccttcctggttcagagtttagaagtgagaat
cagaccatggatgattatagctggttggatgggtatcagctgccctcttctacaaaagac
tctgctaatgctacacatctcacatctcatatgaatgctcagcaaattggtggtagtaat
gtattgagtgcggcaatcagcttcccttttcctggcaaacaagttccaaatgtgcagtct
ccgataggaaaacagaaaggctggcctgatttccaggttcttgagaatctaaaacagcac
aatgaacaacatctgcagccacatcaacagcttgtgaatggtggtagccaactctttact
ccactgcctgagcaatatccaggacagtctatttggacaggtcgttacttcatgtga
DBGET
integrated database retrieval system