Cucurbita maxima (winter squash): 111496770
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Entry
111496770 CDS
T05246
Name
(RefSeq) U3 small nucleolar RNA-associated protein 6 homolog
KO
K14557
U3 small nucleolar RNA-associated protein 6
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111496770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmax03009
]
111496770
Ribosome biogenesis [BR:
cmax03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
111496770
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP6_C
U3_assoc_6
HAT_PRP39_N
TPR_14
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
Suf
DUF5805
LST1
DUF3963
Motif
Other DBs
NCBI-GeneID:
111496770
NCBI-ProteinID:
XP_023003045
UniProt:
A0A6J1KQP1
LinkDB
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Position
Unknown
AA seq
651 aa
AA seq
DB search
MADVVQFRLEGMLDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYVAYIDY
ETHLDSLRRLRKKAVSRELKKQGNKKMRKSVSDFACVKRILYIYRLAVSRYKGDIDLWFR
YLEFCRAQKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHDTNVDAARSLMLSGLRVCP
TSEDLWVEYLRMELTYLNKLKARKVALGEDEGSLVRENKAAEDKQWREENKDLFMSIGED
REDNDGSVGETESKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
SEELHSKILQDIKRDFGTEPQYWDWLARLRYNPDDVQGMSDKKKNSRIEKAVQVYEEGLE
HVPSSAMFSLYVEFLMNVITSVKGEQSSGLSSCTMNTTSRLLMVYEKALTSGHITDDLAC
QYVSFYFQLGKLDEARKLAKRLCSGKLSNSVKLWVLRVSTEIKSILKDSPSPSKDDLKSI
FELTKEVLRDFSVSESGSLWLTVLKFFANQSHYFDQLVEISLFALAKSGGSEDGFSLSSA
IVDFILQKDGIQRTREVYKKFLRLPHPGLAIYRTCIQLESNLASAGDKNGLASARKLFES
ALATYGQDVSLWQEYYIMESKVGSSETAAAIRWRARKTLKDATALATSSDL
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgttgtgcagttccgactcgagggcatgctcgacgagctcgatgaccttgag
caacgtggcctcttctcccggcgagagattgccgagattgtaaagcagcggcgcaagttt
gagtaccgtctcaaacgaccttgtccgcttaagcaggactatgtggcctatatcgattac
gagacccatttggactcgcttcggcgtctcaggaagaaggcagtatctcgtgagcttaag
aagcagggaaataaaaagatgagaaaatctgtctccgacttcgcttgtgtgaaaaggatc
ttgtacatttatcggcttgcagtttctaggtataagggtgatattgatctttggtttcgc
tatctcgagttttgtagagcacaaaagaacgggagaatgaagaaggttctcgctcagctg
attaggtttcacccaaaagttccaggggtctggatatatgctgctgcttgggagtttgat
catgataccaatgtggatgcagcacgttcacttatgttaagtggtctgagggtttgccca
acttcagaggatctatgggttgaatacctacggatggaacttacttatcttaataagttg
aaggctcgaaaggttgcccttggtgaggacgagggaagtctagtccgtgaaaataaagct
gccgaggataaacagtggagagaggaaaataaagatttatttatgtctattggtgaggat
agagaagataatgatggatcagtcggtgaaacggagtcgaaaaataaattggatttgttt
cgagagaagggttcaaacattttagaaactatctacaatggtgcaattgaagcacttcct
tctagttttagcctgagaaagcgtgtcttagagatactggaagcaatggatttagctcat
tcagaagaattgcactctaaaatattacaggatattaaaagagacttcggtacagaacca
caatattgggactggctggctagacttcgatataatcccgatgatgtacagggaatgagt
gataaaaagaaaaactctcggattgaaaaagctgtccaggtctacgaggaaggcttagag
catgtgccttcatctgcaatgtttagcttgtatgtggagtttttgatgaacgtcattact
tctgttaagggagaacaatcgtctgggttatctagttgtactatgaacactacttcccga
ctcttgatggtgtatgaaaaggctctaacttcaggacatattacagacgatttagcttgc
cagtatgtttcattttatttccaacttgggaaattggatgaagcacgtaagcttgccaaa
agactctgcagtggaaaactttcgaattctgtcaagttatgggtattgagagtctccaca
gaaataaaatccattttgaaggattctccttctccaagtaaggatgatctgaagtccatc
tttgaactgacaaaagaggttctgagagatttttcagtttcagaatctgggagcctgtgg
ctaacggtcctcaagttttttgccaatcaaagtcattattttgatcaattggttgaaatt
tctctttttgcattggctaaatctggtggcagtgaggatggcttctcactctcgtcagcc
attgttgatttcattctacaaaaagatggaattcagcgtacaagagaagtgtataagaaa
tttcttagattaccgcatccagggcttgctatataccgaacgtgtattcagctggaatcc
aatcttgcatcggcaggggataaaaatggtcttgcaagtgctcgaaagctatttgaatct
gcacttgcaacttatggccaagatgttagtttgtggcaagagtactacataatggaatcc
aaggtgggatcatcagaaactgcagctgcaattcgttggcgtgcaaggaaaacattaaaa
gatgctacagcacttgccacttcctctgatttgtga
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