Cucurbita maxima (winter squash): 111497072
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Entry
111497072 CDS
T05246
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 16-like
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
cmax
Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmax03009
]
111497072
Enzymes [BR:
cmax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111497072
Ribosome biogenesis [BR:
cmax03009
]
Eukaryotic type
Pre-60S particles
Helicases
111497072
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
111497072
NCBI-ProteinID:
XP_023003467
UniProt:
A0A6J1KMM1
LinkDB
All DBs
Position
Unknown
AA seq
581 aa
AA seq
DB search
MERLSKELEQEKEGLEDDLSFEELGLDPRLVRALIKKGILKPTPIQHVAIPLILEGKDVV
ARAKTGSGKTFAYLLPLLQKLFTGSSTEKKSGPSAVLLVPTRELSQQVNKEVSSLVESCR
VQLKVSQLTSSMSHSDLRTALAGPPDIIVATPACIPKCLSAGVLQPASINESLEILVLDE
ADLLLSYGYEDDIKAFAAHIPRSCQCLLMSATSSEDVEKLKKLILHNPFILTLPEVGDIK
DDLIPKNVQQFWISCDARDKLLNILSLLKLDLVQKKVLIFTNTIDMAFRLKLFLEKFGIK
SAVLNAELPQNSRLHILEEFNAGLFDYLIATDDGQTKEKEANEESNVDKKRFRKRAKQKM
DSEFGVVRGIDFKNVYTVINFELPPSAAGYVHRIGRTGRAYNTGASISLVSSDEVETFGE
IQSFLRADGDTDIIVPFPLLTKNAVESLRYRAEDVSKSVTKIAIRESRALDLRNEILNSV
KLKAHFESNPRDLDLLKHDKTLSKKPPAPHLRDVPDYLVDPVTQEASKVIKLARAAMGNI
QSGCRRGFKRKSRNDKDPLKTFLAEAPKKSRRSGGEKRRQK
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggagaggctttccaaagaacttgagcaggagaaggaaggcttagaagatgacttgagt
ttcgaagaacttgggttggaccctcgtctagttcgcgcgctaatcaagaagggaatttta
aagccaacacccatacaacacgttgcaattccgttaattttggaaggaaaggatgtggtg
gctcgggcgaagactggttctgggaagactttcgcgtacctccttccattgcttcagaag
ctgtttactggttctagtacggagaagaagtcaggtccaagtgcagttcttctcgttccg
actcgggagctcagtcagcaggttaataaggaagtttcatccctcgttgaatcctgtcga
gttcaattgaaagtttcccaattgacaagcagcatgtcacattctgatttgcgaacagca
ttggcaggaccacctgatatcattgttgctacgcctgcttgcattcccaagtgcttgtct
gctggcgttctccaaccagcctccattaatgaatcacttgaaattctcgttctggatgag
gctgatttgctattgtcatatggctatgaagatgatattaaagcttttgcagctcacatc
ccacgttcctgtcaatgccttcttatgtccgctacatcaagtgaagatgttgaaaaattg
aagaagttgatcctgcataatccgttcatcttgactttgccagaggtgggagatattaaa
gacgatctaattccgaaaaatgttcaacaattttggatctcatgtgatgctcgagacaag
ttactaaatattctttcgctcttaaagttggacttggttcagaaaaaagttcttatattc
acaaataccatcgacatggctttcaggttgaaattgtttcttgagaagtttgggatcaaa
tctgctgttctaaatgctgagttgcctcaaaattcacgcctccatattcttgaggagttt
aatgctggtctgttcgattatttaattgcaactgatgacggtcaaacaaaagaaaaagaa
gccaacgaggaaagtaatgttgataagaaaaggttcagaaaacgtgctaagcaaaaaatg
gattctgaatttggagtagtacgaggaattgacttcaaaaatgtttatacagttataaac
tttgagttgcctccgagtgcagcaggatatgtacatcgtataggacgtactggaagagct
tataatactggtgcatctatttcactggtttcctcagatgaggtggaaacttttggagaa
attcaatcttttctaagagctgatggagatacagacattattgttccttttccattactt
actaaaaatgctgtagagtctttgcgttatagagctgaggatgtttctaaaagtgtgaca
aagattgctattagagaatctcgagctctggatttgaggaatgagattcttaactccgta
aaattgaaagctcactttgaatctaacccgagggacttagatttgttgaaacatgataag
actctcagcaagaagccccctgctcctcatctgcgtgacgtacctgactatcttgtcgac
ccagtaactcaagaagccagcaaagtcatcaaactagctagagcagcaatgggaaatata
cagtctggttgtcggcgtgggttcaagagaaaatctagaaatgataaagatcctcttaaa
acgtttttagctgaggctccaaaaaaatctcgacgcagtgggggggaaaagagaaggcaa
aaatga
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