Cucurbita maxima (winter squash): 111497446
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Entry
111497446 CDS
T05246
Name
(RefSeq) uncharacterized protein LOC111497446
KO
K10756
replication factor C subunit 3/5
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03030
DNA replication
cmax03410
Base excision repair
cmax03420
Nucleotide excision repair
cmax03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111497446
03410 Base excision repair
111497446
03420 Nucleotide excision repair
111497446
03430 Mismatch repair
111497446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmax03032
]
111497446
03036 Chromosome and associated proteins [BR:
cmax03036
]
111497446
03400 DNA repair and recombination proteins [BR:
cmax03400
]
111497446
DNA replication proteins [BR:
cmax03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
111497446
DNA Replication Termination Factors
ELG1-RFC complex
111497446
Chromosome and associated proteins [BR:
cmax03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
111497446
DNA repair and recombination proteins [BR:
cmax03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
111497446
Check point factors
HRAD17(Rad24)-RFC complex
111497446
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCF1-5-like_lid
RFC_C
DNA_pol3_delta2
Rad17
Exop_C
Motif
Other DBs
NCBI-GeneID:
111497446
NCBI-ProteinID:
XP_023003996
UniProt:
A0A6J1KQV6
LinkDB
All DBs
Position
Unknown
AA seq
727 aa
AA seq
DB search
MKQRKDGYEPSDTETEWQESPWNDPKAKKLVLDYNNRRADSAASKKFSTAANISPPGSRR
NNGKTPHRPAKDDSVLVMHQRNISPLSRAERRRHKSPFKAGAEEIGSSSMRSRKEEKLTY
SHGSNRISQKPNHNRRSVTAPRLRTRDEHMSAVNDLSQRRDRAAPSLQVNSILHQSKEVS
QVNSLSVGEMNEMIADGRVHRGSIFNEPMVESTGSISPGDIFFSRDGLAIGINNNVTGKR
NAFKNYISPRPNFVSKKNDDTYNQVEVNANGRGVTSAGAGLSTTTTNSAAVSRENSSRIS
TESSKISDVSGRTSESTRRFIASRRKKKNEMWFSCMRNGPCRTTKSPEKREFDEATFIER
ANVVEYLKPFWADKHRPVSLSGFAFHKPEAQTLKQLVLQDSFPHILFKGPCGSGKRVLIM
ALLREIYGDSCWNVSHDLRCFQIQERKLTQVFVPLTSSAHHVELNLSSEANAKYALLGLA
KEIGSEYSINVEARNLNPKASFKVVILLDVDKAVEDIQHLLRWIMDGYKDACKVVLCCDN
DTGILDSVISRCKVIKINPPVTHEIIDVLIQIAKKEEFDLPMNFASKIATKAKQNLRKAI
MALEACKAHNYPFSDDQPIPIGWEEAVVELAAHILEDPTNPRLHLVKEKIQKLLVDSVHP
KLILQKLVEEFLKRIELRSRRELYYWHAYYNKRLPTETGTGALPKLEEFVAKFMSMYRKS
STNLVYD
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagaggaaggatggatatgaaccgtctgatacggagacagaatggcaagagagc
ccttggaatgaccctaaggcgaagaaacttgtactggattacaataaccgacgagcagat
tcggcagcatcgaagaagttcagtactgcagcgaatatttctcctcctggttcgagaaga
aacaatggcaaaacgcctcacaggccggccaaagacgacagtgttctagtcatgcatcag
agaaacatcagccccttgtcgagagcagaaagaagaagacacaaatctccttttaaagct
ggagcagaggaaattggaagctctagcatgaggtcaagaaaagaggagaagttgacttat
tctcatgggagtaacagaataagtcaaaagccaaaccacaatagaagatcagtgactgct
ccaaggttgagaacgagagatgaacatatgagtgctgttaacgatttatctcaaaggaga
gacagagctgctccatccttgcaggtcaactccatcctgcaccagtcaaaggaggtttct
caagtgaactctctttctgttggtgaaatgaacgagatgattgcagatggaagggtccat
agaggttcgatttttaatgaaccgatggttgaaagcacggggtcaatctcgccgggggac
atattcttttcgcgtgatggcttggctattggaataaataacaatgtcacaggaaagaga
aatgcattcaagaattatataagtccaaggcctaactttgtgtccaaaaagaatgatgat
acttataatcaagttgaagtaaatgctaatggtagaggggttacttctgctggagctggt
ttgtcaacgaccacaaccaatagcgctgctgtaagtagagaaaatagtagtagaattagc
actgaaagtagtaagatcagtgatgtgagtggaagaacaagtgaaagtacaagaaggttt
atagccagtagacgaaagaagaagaacgagatgtggttttcttgtatgaggaatgggccc
tgcaggacgacgaaatcgcccgaaaagcgggagtttgatgaagctacattcattgaaaga
gcaaatgttgttgaatacttgaaacccttttgggcagataagcatcgaccggtgtcctta
agtggattcgctttccataagcctgaggcgcaaactctcaagcaattagttttacaagac
agttttccccacatcctgttcaagggtccgtgcggatctggcaaacgagtgctcattatg
gctcttttgcgtgagatatatggcgattcatgttggaatgtttctcatgatttgcgatgt
ttccagattcaggaaagaaaactaacgcaagtctttgttccattgacgtcaagtgctcac
catgtggaactaaatttaagctcagaagcaaatgctaagtatgctctactgggattggct
aaagaaataggcagtgaatattccattaatgtggaggcaagaaatctcaatccgaaggct
agtttcaaagtggtaatccttttagatgtagacaaagctgtagaggatattcaacatttg
cttaggtggattatggatggctataaggatgcctgcaaagtagtactctgttgtgacaac
gacacaggcatccttgactcagtgataagccgctgcaaagttatcaaaattaaccctcca
gtaactcatgaaatcatagatgtacttatccaaatagcaaagaaggaggaatttgacctg
cctatgaactttgcttctaagattgctactaaagcaaagcagaacctgagaaaagcaatc
atggcgcttgaagcatgcaaggcacacaattatccattttctgatgaccagccaatcccc
attggatgggaagaggccgtggtagaactcgcagctcatatcctcgaagacccgacgaat
ccgagattacacctagtaaaagaaaaaattcagaagcttctagttgattcagttcatcca
aaactaatcctccagaagctcgtggaagaatttctgaaaagaattgagctgaggtcaagg
agggaactttattactggcatgcttattataacaagagactcccaactgaaactggaaca
ggcgccctacccaaattggaagaattcgtggcaaagttcatgagcatgtacaggaagagc
tccaccaacctcgtttatgattga
DBGET
integrated database retrieval system
