Cucurbita maxima (winter squash): 111497572
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Entry
111497572 CDS
T05246
Name
(RefSeq) protein LHY-like isoform X1
KO
K12133
MYB-related transcription factor LHY
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
111497572
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmax03000
]
111497572
Transcription factors [BR:
cmax03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
111497572
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
111497572
NCBI-ProteinID:
XP_023004163
UniProt:
A0A6J1KVG5
LinkDB
All DBs
Position
Unknown
AA seq
732 aa
AA seq
DB search
MDPNSSGEDLVFKTRKPYTITKQRERWTEEEHGRFLEALKLYGRAWPRIEEHIGTKTAVQ
IRSHAQKFFSKLEKEALVKGIPVGQALDIDIPPPRPKRKPSNPYPRKSPISMLGANDGKL
STLVSSLQSKQILDLEKKPMNEATSGEEQTFNEKDTHDDNCSEVFTLSGEANSFSLKNQH
SVPVQVKFNDSCAFREFVPSVKEPLHEKGMGKLSELVISSASREKLVSAEKKEALSCALS
GDEMQAAHNYPRHVPVHVVDGSLGANGQGSLRDAPLQESAFHPSMEIQGERSILRNPSGS
ISFEHQHNAPGSIYQSYPPIHPTPFTLLHPNQEHYKSVLQMSSAFLNLIVSTLQQNPAAH
AIASLTATCWPYVNPETSADASACDTEGSKTKQMNPTPSKEAIAVATVAAATAWWAAHGL
PPLCSPLHSAFTSAAISAPVVQSSDACPNSESKDKAESSLQNAALQNQQLDAEQSEVLTA
HQSGSKSPTHSSSDSGNGGADANATVKPVHNEKTPAEVEFHDSNEEKRGKQVDRSSCGSN
TPSGSDREMYATEKNDEKEKGKELETNHPAPESSIRRSRSISNTSESWKEVSDEVKRGRL
AFQALFTRDVLPQSFSPPYDVESENKENENVEKVSQSVDKDNSGASVLDLNSNTCGTSTS
AIGVNNGEGEFPSIGLGNGTPKVCRTGFKPYKRCSVEAKEKRMTATSSNHNEEGGQKRLR
LDQKASNCCMYF
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggatcccaactcctctggagaagacttggtttttaagaccaggaagccatatactatt
acaaagcaacgagagcgctggacggaggaggagcacggtagatttctagaggcgctgaaa
ctctatggccgagcatggccgagaattgaagaacatattggaaccaaaacagcagttcag
atacggagtcatgcacaaaagttcttttcaaagttggaaaaagaagcacttgttaagggg
attcctgtaggacaagctcttgatatagacattccaccacctcgtcctaagaggaaacca
agtaatccttatccaaggaagtctcctatatcaatgttgggagcaaatgacgggaagctc
tcgactctggtgtcttctttacagagcaaacaaatcttagatttggagaaaaagccaatg
aatgaggctactagtggagaagaacaaacatttaatgaaaaggatactcatgacgataat
tgctcagaagtatttaccctatcaggagaagctaactccttttctttgaaaaaccaacat
tctgtaccggtgcaagttaaattcaatgactcatgtgctttccgggagtttgtgccctca
gttaaagagccactccatgaaaaaggcatgggaaaactttcagaattggtgatttcaagt
gcttcacgcgaaaaattggtgtctgctgaaaagaaagaagctttaagctgtgcactgtct
ggggatgaaatgcaagctgctcataattatccaaggcatgtgcctgtgcatgtggtagat
ggaagcctgggagcaaatggtcaggggtctttaagagatgctccactgcaggaatccgct
ttccatccatctatggagattcaaggagagcgtagtatacttcggaatccatctggttct
atttccttcgaacatcaacataatgcacctgggagcatttatcaatcatatccacctatt
catcctactccatttaccttacttcaccctaaccaagaacattacaagtcagttctccag
atgtcttccgcatttctgaatcttattgtgtccacccttcaacaaaaccctgcagcccat
gcaatagcaagtcttacagcaacctgttggccctatgtgaatcctgaaacttctgcagac
gcctcagcgtgtgatacagaaggttctaaaaccaagcaaatgaaccccacccccagtaag
gaagccattgctgtagcaactgtagcagctgcaactgcatggtgggcggcccacggattg
ccacctttatgttctcctttgcattctgcctttacgagtgctgctatatcagctcctgta
gtacaatcgtcagatgcctgtccaaattctgagtccaaggacaaagcagaaagttcccta
caaaatgctgctttgcaaaatcagcagctggatgcagaacaatcagaggttttgactgct
catcagtcaggttccaagtcacctactcattcatcatctgactctggtaatggaggtgca
gatgcaaatgctacggtgaaacctgtccacaatgagaagacaccagctgaggttgagttt
catgattcaaacgaggagaagagaggaaaacaagtagatcgttcctcatgtggttccaat
acaccatctggaagtgatcgagagatgtatgcaacagaaaaaaacgatgaaaaagagaag
ggcaaagagcttgagacgaaccatccagctcccgagtccagtattcgtcgtagtagaagc
atcagtaacactagtgagtcttggaaggaggtttctgatgaggtaaaaagggggcgtctg
gcctttcaagcactcttcacaagggatgtattgcctcaaagtttttcacctccatatgat
gtagaaagtgagaataaggagaatgagaacgttgagaaagttagtcagagtgtagataaa
gataatagtggcgcatcagttttggacctcaacagcaacacttgtggtacttctacatca
gcaataggtgtcaataacggagagggggaatttccctcaattggacttggaaatggcacc
cccaaggtttgtcgaacaggatttaaaccttacaaaagatgttcagtggaggcgaaggaa
aagagaatgacagcaacatccagcaaccacaacgaggagggaggccaaaaaagactacgt
ctggaccagaaagcctcaaattgctgcatgtatttctaa
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