Cucurbita maxima (winter squash): 111497696
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Entry
111497696 CDS
T05246
Name
(RefSeq) nuclear cap-binding protein subunit 1-like
KO
K12882
nuclear cap-binding protein subunit 1
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03013
Nucleocytoplasmic transport
cmax03015
mRNA surveillance pathway
cmax03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111497696
09122 Translation
03013 Nucleocytoplasmic transport
111497696
03015 mRNA surveillance pathway
111497696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmax03019
]
111497696
03041 Spliceosome [BR:
cmax03041
]
111497696
Messenger RNA biogenesis [BR:
cmax03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
111497696
Spliceosome [BR:
cmax03041
]
Common components
Common spliceosomal components
Cap binding complex
111497696
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
MIF4G
DUF8221
TPR_MLP1_2
CCDC39
DUF4407
DUF5798
Par-4_C
CCDC93_CC
DUF4349
Motif
Other DBs
NCBI-GeneID:
111497696
NCBI-ProteinID:
XP_023004357
UniProt:
A0A6J1KQ76
LinkDB
All DBs
Position
Unknown
AA seq
867 aa
AA seq
DB search
MSSWKSLLLRIGDKSPEYGTSSDFKDHIETCFGAIRRELDHYGDEVLPFLLQCVEQLPHK
TPLYGTLIGLINLENEDFVKKIVDQTHKSFQDALNTGNCHRIRILLRFLTTLMSSKVLLS
TSLVVVFETLLSSAATTVDEEKGNPAWQARADFYISCILSCFPWGGAELVEQVPEELERV
MVGVEAYLSIRRHTVDTGLSFFEDAGEVEKTLNEKDFLEDLWGRIQALSSDGWKVDSVPR
PHLLFEAQLVAGKSHEFGSISCPEQPDSPSTPSGITYGKQKYDAELSYPQRIRRLNIFPS
SKFEDLQPIDRFVVEEYLLDVLLFFNGCRKECASFMVGLPVPFRYEYLMAETIFSQLLML
PQPPFKPIYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRIRLILWFSHHLS
NFQFIWPWEEWAYVLELPKWAPQRVFVKEVLDREVRLSYWDKIKQSVENAPGLEELLPPK
GGPNFKFSTEDDGEKNEQHALSAELYNMVKGRAAAREVISWLNETVIPKHGFDVSLVVIV
QTLLDIGSKSFTHLITVLERYGQVISRICPDQDKQVLLISEVSSYWKNNTQMTAIAIDRM
MGYRLISNLAIIRWIFSPENIEQYHTSDRPWEILRNALCKTYNRISDLRKEISSLKKDIV
AAEEAVAKTQDELNAAESKLALVDGEPVMGENPVRVKRLKSYAEKAKEQEESIRDSLEAK
EALLARALEENETLYLSLYKSFSSILTERLPVASSVQTLQDLKSINPTDTNAMDLEEEPA
AMDMDNEDSRPEKSQVNGGTEHAYTVGENEQWCLTTLGYVKAFSRQYASEIWPHIEKLDA
EVLLSEDAHPLFRKAVYSSLRRSMDSI
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgagcagctggaagagtcttcttcttcgaattggcgacaagtccccggaatatggcacc
tcctccgacttcaaagaccatattgaaacttgctttggtgcgattcggcgggagttggat
cactatggagatgaagttttgcctttccttctacaatgcgttgaacaattgcctcataag
actcctttgtacgggacattgattgggttgataaacttggaaaatgaagacttcgtgaag
aaaattgtggaccaaactcacaaaagttttcaggatgccttaaacactggaaattgccac
aggatccgaattttgttacgctttctaactaccctgatgagcagtaaagtcctgctgtcc
acttctttagttgttgtttttgaaacattattatcttcagctgccacaacagtggatgaa
gagaagggaaaccctgcatggcaggcacgcgctgacttttacatatcttgcattctctcc
tgttttccctggggaggagctgaactggttgagcaagttcctgaagagctcgagagagta
atggttggagtagaagcttacttaagtattcgaaggcataccgtggacactggtttatcc
ttttttgaggatgctggtgaagttgaaaaaactcttaatgagaaggattttttagaagat
ttatggggacgcattcaagcgttatctagtgatggatggaaagtggatagtgttccaagg
ccccaccttctatttgaagctcagctagttgctggtaagtctcatgaatttggaagcatc
agctgtccggagcaacctgattcaccttcaacaccttctggcattacttatggtaaacag
aagtatgatgcagagttaagttatcctcaaaggatacgtcggcttaatatatttccatca
agtaaatttgaggatctgcaacctattgatcgttttgtcgtggaggagtatcttttagat
gtgcttcttttcttcaatggctgtcgaaaggaatgtgcgtctttcatggttggtctccct
gtaccttttagatatgagtatcttatggcagagacaatcttctcgcagttactcatgcta
ccacaaccaccattcaagcctatttattatacgctggtcattattgacctttgtaaggct
cttcccggggcctttcctgcagttgtagctggtgcagttcgtgctctgtttgagaaaata
gctgatctagacatggagtgccgcatacggctaatactttggttttcacaccatctatca
aactttcaatttatatggccatgggaagaatgggcttatgttttagaacttccaaaatgg
gctccacagcgagtgtttgtcaaggaggttctggatagagaagttcgtctatcatactgg
gataaaattaagcagagcgtcgagaatgcacccggtttagaagagttgctacctcccaag
ggcggaccaaatttcaaattttctacagaagacgacggagaaaaaaatgaacaacacgca
ctttctgctgaattatacaatatggtgaaaggacgggctgcagcacgggaagtaatttca
tggctcaatgaaactgtaattcctaagcatggttttgatgtttcactcgtggtgatcgtc
caaactcttctagatattgggtcaaagagtttcactcatttgataacagttttggagaga
tatggtcaagtgatttcaagaatatgccctgatcaggataagcaggtcttgcttatatct
gaagtgagttcttactggaagaacaatactcaaatgacggcaatagcaattgatagaatg
atgggttacaggttaatatccaatttggccattatcagatggatcttttctccagaaaac
atcgagcagtatcatacgtcagatcgtccatgggagatattaaggaatgcgttatgcaag
acgtataatcgtatttccgatcttaggaaagaaatatcctccctgaagaaagatattgtt
gcagctgaagaagctgtagcgaagacacaagacgagttgaatgctgctgaatcgaagctc
gcacttgtcgatggtgaacctgttatgggagagaatcctgtaagagtgaagcgattgaaa
tcctatgctgaaaaagcaaaagagcaggaagaatcgatacgagactcgttggaagccaaa
gaagctcttcttgcccgagcgctcgaggagaacgagacattatatctatccttatacaaa
agcttctccagtatattgaccgaacgccttccagtggcatctagcgtacaaacgttgcag
gatttgaagtctattaatccaactgatacgaatgctatggacctcgaagaagaaccagca
gccatggatatggacaatgaagattcaagacctgaaaaaagtcaagtgaacggtgggaca
gagcatgcctacactgtaggtgaaaatgaacaatggtgtttaacaaccttaggatacgtc
aaggccttctccagacaatacgcttccgagatatggccacacatcgagaagttggatgca
gaagtcttgttatcagaagatgcacaccctcttttcaggaaagcagtctacagcagccta
cgtcgatctatggactcaatctaa
DBGET
integrated database retrieval system
