Cucurbita maxima (winter squash): 111497784
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Entry
111497784 CDS
T05246
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
111497784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmax04121
]
111497784
Ubiquitin system [BR:
cmax04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
111497784
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
LRR_At1g61320_AtMIF1
F-box-like
F-box
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
111497784
NCBI-ProteinID:
XP_023004496
UniProt:
A0A6J1KSA8
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Position
Unknown
AA seq
584 aa
AA seq
DB search
MLRMASTFQEDVLEHVFSFIQCHKDRNSISMVCKSWYEIERWCRKRIFVGNCYAVSPQIV
IRRFPEVRSVELKGKPHFADFSLVPDGWGGYVHPWIVAMASAYPLLEEIKLKRMVVTDES
LELISKSFKNFKVLVLMTCEGFSTDGLAAIAANCRNLRVLDLRESDVEDLSGHWLSHFPD
KYTSLVSLNIACLVSEVSISALERLVDRCPNLRTLWLNRPVPLDRHPNLLRRAPQLVEFG
AGCYTADLRSDVFSNLTTAFTSCTELKSLSGFWDVVPAYLPSVYPTCSRLTSLNLSYATI
QSDDLTKLISQCHNLQKLWVLDYIEDSGLEALADTCKDLRELRVFPSEPYGPEPNVSLTE
QGLVSVSEGCPKLQSVLYFCRQMTNAALVTIARNRPNMTRFRLCIMEPRTPDYLTNQPLD
VGFGAIVEHCKDLQRFSLSGLLTDRCFEYIGNYGKKLEMLSVAFAGDTDLALHHVLSGCD
SLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCLVSFGACKLLAQKFPKLNVEVIDER
GHPNIRPESCPVEKLYIYRSVAGCRLDMPGFVWTMDGDASPRLT
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgctgagaatggcgagtacgtttcaggaggatgtgttggagcatgtgttttcgtttata
cagtgtcataaggatagaaactcgatctcgatggtgtgtaagtcgtggtatgagattgag
aggtggtgtaggaagaggatttttgttgggaactgttatgcggtgagtcctcagattgta
atcaggaggtttccggaggtgagatctgtggagttgaaggggaagccgcactttgcggat
tttagtttggtgcctgatggttggggtgggtatgttcatccttggatcgtggctatggct
tctgcgtatcctttgctggaggagatcaagttgaagcgaatggtggttacggatgagagc
ttggagctcatttccaagtcttttaagaattttaaggttcttgtgttgatgacttgtgag
gggttcagtactgatgggcttgcggccattgctgccaattgcaggaatttgagagtgtta
gacttacgagagagtgatgtggaagatctgagtggacattggctcagccattttcctgat
aaatatacgtcacttgtatccctcaatattgcctgtttggtgtctgaggtgagtatttct
gcattggagcgtctcgtggataggtgtccaaacttacggacactgtggctcaaccgtcct
gttccccttgataggcatcccaacctacttcgtcgagcaccacagctagttgagtttggt
gcgggatgctacacagcggacttgagatctgatgttttttcgaacttaacaacagcattc
acaagctgtacagaattgaaaagtttatctggattttgggatgtggttcctgcatacctt
ccttccgtttatcccacttgctctaggctaacatccttgaatttgagctatgccacaatt
cagagtgacgatcttaccaagcttataagtcaatgccataatttgcaaaagctttgggtg
ctggattacattgaagattctggccttgaagcccttgcagatacttgcaaggatcttcga
gaattaagagtgtttccatctgaaccatatggtccagaaccaaatgtgtctttgacagaa
cagggtcttgtctctgtttctgaaggttgcccaaagctccaatccgttctgtacttctgt
cgtcaaatgacaaatgctgccttagtgaccattgccagaaatcgaccaaacatgacacga
tttcgtctctgtattatggagccacgaactcctgattacctcacaaatcagccgcttgac
gtgggctttggtgccattgttgagcattgcaaggatctccaacgcttttccctctctggc
cttcttacagatagatgttttgagtacattgggaattatggcaagaagctagagatgcta
tctgtggcatttgctggagatactgatttagcacttcatcatgtgttgtccggatgtgat
agtcttcgcaagctggagattagggactgtcctttcggtgacaaagctcttttggcgaat
gctgcaaagctcgagacaatgcgatccctttggatgtcttcttgcttggtgagttttgga
gcatgcaaattgttagctcagaagtttcccaaacttaatgttgaagttatagacgagagg
ggtcacccaaatataaggcccgaaagttgtcccgtggaaaaactttatatataccgtagt
gttgctgggtgtcgcttagacatgcccggtttcgtgtggacaatggatggagatgcttct
ccaaggcttacttga
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