Cucurbita maxima (winter squash): 111498272
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Entry
111498272 CDS
T05246
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A
KO
K07466
replication factor A1
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03030
DNA replication
cmax03420
Nucleotide excision repair
cmax03430
Mismatch repair
cmax03440
Homologous recombination
cmax03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111498272
03420 Nucleotide excision repair
111498272
03430 Mismatch repair
111498272
03440 Homologous recombination
111498272
03460 Fanconi anemia pathway
111498272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmax03000
]
111498272
03032 DNA replication proteins [BR:
cmax03032
]
111498272
03400 DNA repair and recombination proteins [BR:
cmax03400
]
111498272
Transcription factors [BR:
cmax03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
111498272
DNA replication proteins [BR:
cmax03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
111498272
DNA repair and recombination proteins [BR:
cmax03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
111498272
MMR (mismatch excision repair)
111498272
DSBR (double strand breaks repair)
HR (homologous recombination)
111498272
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
zf-CCHC
zf-CCHC_3
zf-CCHC_5
CDC24_OB3
AIR2-like_ZnK4
DUF223
Motif
Other DBs
NCBI-GeneID:
111498272
NCBI-ProteinID:
XP_023005147
UniProt:
A0A6J1KSC4
LinkDB
All DBs
Position
Unknown
AA seq
857 aa
AA seq
DB search
MAASMAQFKLTEGAVMMICKRESTAETFQPVVQVIDLKLVNTAQQSGSERYRLLLSDGTH
YQQGMLGTQLNGLVKSGKLQKGSIVQLKQYVCNPVQERLIIIVIELDVVVEMCEFIGEPV
PATRSVTGAFNGNPQSSVVTSPSSGIAGKMNVSSASSELPKVNQSHASHVGAYSNTPESG
RYTASIAPPLYPNKTDPGTRFNGSSSLSGSYGDQKMAYHNNGSDDPRPPLNAYACPQPTY
QQPPSMYSNRGSVAKNEAPPRIMPINALNPYQGRWTIKARVTSKGELRHYNNPRGDGKVF
SFDLLDAHRGEIRVTCFNMVADQFYNQIEPGKVYFISKGSLKPAQKNFNHLKNDFEIFLE
STSTIQPCFEDDQSIPKQQFHFHQISEIEGMDNNSVVDLIGVVTSINPSTSIMRKNGIET
QKRTLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGMFPVLAVKTGRVSDFNGKAVGT
ISSSQLSVEPDFPEARTLREWFENEGRSTPSVSISREVSSIGRTDVRKTISQIKDERLGT
SEKPDWITVSATVSFIKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSVDECD
YRYILQLQIQDHTGLTWVTAFQEGGEEIMGVPAKRLYYLKYEEQDDEKFAEIIRKVLFTK
FIMKLKIKEETFSDEQRVRSTVVKAESINFSTESRFLLDLMEKLRAENASSVTPKTESTI
HDLGLRGTGNVGGGQFVSPSRNISNVSSREYVTPNLGVQYENQYSSSRPSPSMVHNSHTY
CNSCGGSGHSSMNCPSITSAPTHPIGGGMYSNRSSGPSGGGVSGECFKCHQTGHWARDCP
GLAAVPPAYGNSGFTAR
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgtcaatggcgcagtttaagctgacggaaggagcagtgatgatgatatgcaag
agggaatcgaccgcagagacgttccagccggttgtgcaagtaattgacttgaaattggtt
aacactgcgcaacaatcgggcagcgagagatacagattgttgctttctgatggaacacat
taccagcaaggaatgttggggactcagctgaatggattggtgaagtctgggaagttgcag
aaaggttccatagttcaactgaagcaatatgtttgtaaccccgttcaagaacgcctgatt
ataattgtcatcgagttggacgtggtagtggaaatgtgcgaatttattggtgaacctgta
ccagcaacgagatcagtaacaggtgcatttaatggaaacccccaatcctctgtggtgact
tcacccagtagtggaatagctggtaaaatgaatgtatctagtgcatcttctgaactgcct
aaagtgaatcaatcacatgcatcgcatgtgggagcttattcaaacactccggaatctgga
agatacactgcatcaattgcgcctcctctttaccctaataagacagatcctggaacaagg
tttaacgggtcatcttctttaagtgggtcatatggtgatcagaaaatggcatatcacaac
aatggatcagatgatccaaggccacctctaaatgcttatgcttgtcctcagccaacatat
cagcagccaccttcaatgtacagcaacagagggtcagtagcaaaaaacgaagctccccca
aggataatgcctattaatgctctgaacccttaccaaggaaggtggacaataaaggctcga
gttacttcaaaaggagaacttagacactacaataatcctcgtggagatgggaaagtgttt
tcatttgatctacttgatgcacaccgtggagaaatacgagttacgtgtttcaacatggta
gccgaccagttttacaaccagattgaacccggtaaagtttacttcatttctaaaggaagc
ttgaaacctgctcaaaagaactttaaccatctaaaaaatgactttgaaatatttcttgag
agcacatcaacaatccaaccttgctttgaggatgaccaatcaatccccaaacagcagttc
catttccatcagattagtgagattgaaggcatggacaacaacagtgttgtagatttaatt
ggtgttgttacctccattaatccttcaacttctataatgagaaaaaatggtatcgagact
cagaagagaacccttcagttgaaagatatgtctggacgaagtgttgaattgactctttgg
ggaaacttttgtcaagcagaagggcaacgattgcaaaatatgtgcgattcagggatgttc
ccagtcttggctgtgaaaactggtagggtgagtgacttcaatgggaaggcagtgggaacc
atttcatcaagtcagctgtctgttgagccagattttcctgaggctcgtacgctgagagag
tggtttgagaatgaagggaggagtactccgtctgtgtctatatcgagggaagtttctagc
ataggcaggacagatgtccgtaagaccatatctcaaataaaagatgagaggttaggaacc
tctgagaagcctgattggattactgttagtgcaaccgtttcatttattaaggtagacaac
ttctgttatacagcatgtcctatcatgatcggggaccgacaatgcagcaaaaaggttaca
aataatggagatggaaaatggagatgtgaccggtgtgatcagtctgttgacgaatgtgat
tacagatacatactccagctgcaaatacaggatcatactggtttaacttgggtaactgca
tttcaagaaggtggtgaggaaatcatgggcgtacctgcaaaaagattgtattatttgaaa
tacgaagagcaagatgatgagaaatttgcagaaatcatccgtaaggttctttttacaaaa
tttatcatgaagctgaaaataaaggaagagacttttagtgatgaacagagagtaaggtca
acagtggtgaaagcagaaagcattaatttttcgaccgagtcccgatttcttctagactta
atggaaaagctcagggcagagaacgccagttctgttaccccaaagacagaaagcaccata
catgatctcggacttcgtggtaccgggaatgttggtggtggacagttcgtgtcacccagt
cgaaatattagcaatgttagcagcagagaatatgttacaccaaacctaggtgttcagtat
gagaaccaatacagcagttctaggccttctccatccatggtgcataattcacacacgtac
tgcaacagctgcgggggctctggtcacagctcgatgaactgcccgagtataacaagtgct
cctacacatcccattggagggggaatgtattcaaatcgatcttctggcccttccggtggt
ggtgtctctggggaatgctttaaatgccatcaaactgggcattgggccagggattgccct
ggtttggccgccgtccctccagcttatggtaacagtggcttcacggctaggtaa
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integrated database retrieval system
