KEGG   Cucurbita maxima (winter squash): 111498921
Entry
111498921         CDS       T05246                                 
Name
(RefSeq) splicing factor U2af large subunit B-like
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
cmax  Cucurbita maxima (winter squash)
Pathway
cmax03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cmax00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111498921
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cmax03041]
    111498921
Spliceosome [BR:cmax03041]
 Complex A
  U2 snRNP components
   U2 related factors
    111498921
 Complex B
    111498921
SSDB
Motif
Pfam: RRM_1 RRM_occluded RBD_DEAH11 RRM_9
Other DBs
NCBI-GeneID: 111498921
NCBI-ProteinID: XP_023006048
UniProt: A0A6J1L124
LinkDB
Position
Unknown
AA seq 899 aa
MSSFSFSKHYSRRSKKQTLSNSNDESAARTRPLSFEDIMLRRKNKGSADTVEVGVTGSHS
RRESIDKLSTDNCASERHFRHGKGASPDVQNLSLEESGKDSSRRKKEETLLKDNMEFRSD
RNNYDSELTLMGKLKYDANGNDKKQKYGLENVGRGKNNQSSRVDIEKETGKRHSRDSKAR
REDLGRGKFERGGKRKDQNGDDEGNRDKYAAKRHDHGKHHDPENRERKEAKGSLTSNYED
SRLKKRRKRSQDRESKHRISPRPHKHSTKLARQKELPLDSNVKKSGRWRSDSDRTGDLTN
SSNSQYRRQSGSTSGLGGYSPRKRRTESAVKTPSPVQSPEKKDEGLDLPPTEKIGLFSSS
INSNFQPSNTTVSSGIINVQSGGAIFSSVIGRSLSGVSSNNIEMKTNVSLDLIQLTQATR
PMRRLYIENLPHSASEKAIIDCLNGFLTSSGINHIKGTLPCISCIIHKDRGQALVEFLTP
EDASAALSFDGSDFSGSILKIRRPKDYVEIVTGGLDKSVAVVNKIIDTVEDSPNKIFIAG
ISNRISSEMLRDIVTAFGPLKAYHFEMNDDLNERCAFLEYVDQSIVSKACAGLNGMKIGG
EVLKVFPAVPFTPLERNECQPWYGIPEHVKPLLQQPTVVLKVNNVFNADVLPVLSEADID
EVLEDIRVECARFGTVKSMNFVKPCNGCFSAEEDYKNISDITDVEIKHEIQENCTMAISR
NGNDVEDNNVNLDNCPNGTNQRQGNCPGNGRHHDEVVEDKLCRMGQDDATRFEIVACENA
SERNPRGLSEQQSSPGNQHRDAKVAETIETNEISPDKKSVCLNDSAMVRTDSDTSAKSKK
GDRRNNLASLFVLGSVFVEFGRTEASCMAAHSLHGRIYDGQEISIEYIPHDLYRKRFPK
NT seq 2700 nt   +upstreamnt  +downstreamnt
atgagctcgtttagtttctcaaaacattacagcagaagaagtaaaaagcagaccctgagc
aactctaatgatgaaagtgcagctcggactaggcctctcagctttgaagatattatgctt
agaaggaagaataaagggtcagctgatactgttgaagtgggtgtcacaggtagccattca
aggagggaaagcatagataagctcagcaccgataattgtgcatctgaaaggcattttcgt
cacggtaaaggtgcttctcctgatgtgcaaaatctttcactggaggagtcgggcaaggat
agttcaagaaggaaaaaagaggagacattgttgaaggacaatatggagtttagaagtgat
agaaataattatgattctgaattgacactgatgggtaagctgaaatatgatgcaaatgga
aatgataaaaaacagaagtatggcctggaaaatgttggtcggggaaaaaataaccagagt
tcaagggttgatattgaaaaggaaactggaaagaggcattcaagagatagcaaggctaga
cgtgaagatcttggtagggggaaatttgaaagaggtggtaagagaaaagatcaaaatggt
gacgatgaagggaatagagacaagtatgctgcaaagagacatgatcatggtaaacaccat
gacccagaaaatagagaaagaaaggaagctaaaggatcgttgacttcaaattatgaagat
tcaagattgaaaaaaagacggaaaagaagccaagatcgtgaaagtaaacatagaatttct
ccaaggccacacaagcactcgactaagttagcgaggcagaaggagttgccattagattct
aatgtaaagaagtctggaagatggcgttctgatagtgatagaacaggggatttgaccaac
agttccaatagccaatacaggcgacaatctgggtcaactagtgggcttggtggctattca
cctagaaagagaagaactgagtctgctgtcaagactccttctccggttcaatcaccagag
aagaaagatgaagggttggatcttcctccaacagaaaaaattggattattttctagttca
attaattccaactttcagccgtcaaatactacagtttcctcgggcattattaatgttcaa
tctggtggtgcaatcttttcttcagttatagggagatctttatcaggggtctcttcaaat
aatatagaaatgaagacaaatgtttctcttgatttgattcagctgacccaagctacccgg
ccaatgaggaggctttatattgaaaacttaccacattctgcatctgagaaagcaatcatt
gattgcctgaatggttttcttacatcttcaggcattaatcacatcaaaggaacactgccg
tgtattagttgtattatacacaaagacagggggcaagctcttgtcgaatttctaactcct
gaagatgcatcagcagctctttcgtttgacggaagtgacttctctggctccattctaaag
attcggcgcccaaaagattatgttgagattgttactggtggcctggacaagtcagtggcc
gtggtaaataaaatcattgatactgtcgaggactcaccaaataagattttcattgctggg
atctcaaatagaatatcatctgaaatgcttagagatattgttactgcatttggacctttg
aaggcctatcactttgagatgaacgatgatcttaatgaacgttgtgcctttttggagtat
gtcgaccaatcaatcgtctccaaagcttgtgctggtctaaatggtatgaagattggaggg
gaagtactaaaagtgtttccagctgttccatttacaccattggaacgtaatgaatgtcaa
ccatggtatgggatcccagagcatgtgaaacctcttcttcaacagccaacagtagtgtta
aaagttaataatgtgtttaatgcagatgtcctcccagtactctctgaggcagatattgat
gaagttcttgaagatattcgggttgaatgtgctaggtttgggacagttaaatccatgaac
tttgtaaagccatgtaatggctgtttcagtgctgaagaagattacaagaacattagtgat
atcactgatgtggagatcaagcatgagattcaggaaaactgcacaatggcgatttcaaga
aatggtaatgatgtcgaagataataacgttaaccttgataattgccccaatggtaccaat
cagaggcagggtaattgccctggcaatggtagacatcatgacgaagttgtggaggacaaa
ttgtgtcgaatgggtcaagatgatgctacacgttttgaaattgtagcttgtgagaatgct
tcggaaagaaaccctcgcggactctctgaacagcagagcagcccaggaaaccaacatcgg
gatgcaaaagtagctgaaacaatcgaaaccaatgaaattagcccggataagaaatcagtg
tgtttaaatgattcagctatggtgagaacagattccgacacgtctgcgaagagcaagaag
ggcgatcgtagaaataatctggcaagtttatttgtgttggggagcgtttttgtcgagttt
ggtagaacggaagcctcgtgtatggcagcacactctttacatggaaggatttatgatgga
caagagattagcattgagtacattccccatgatctctatcgaaagaggtttcctaaatga

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