Cucurbita maxima (winter squash): 111499812
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Entry
111499812 CDS
T05246
Name
(RefSeq) histone deacetylase 6-like
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03082
ATP-dependent chromatin remodeling
cmax03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111499812
03083 Polycomb repressive complex
111499812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmax03036
]
111499812
Enzymes [BR:
cmax01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
111499812
Chromosome and associated proteins [BR:
cmax03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
111499812
HDAC complexes
Sin3A-HDAC complex
111499812
BRAF-HDAC complex
111499812
REST complex
111499812
SHIP complex
111499812
MiDAC complex
111499812
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
111499812
Heterochromatin formation proteins
Other heterochromatin formation proteins
111499812
Chromatin remodeling factors
NuRD complex
111499812
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
111499812
NCBI-ProteinID:
XP_023007272
UniProt:
A0A6J1KY79
LinkDB
All DBs
Position
Unknown
AA seq
465 aa
AA seq
DB search
MADDTYGGASLPSGPDGRKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHR
RMEINRPYPAGTEDIQRFHSDDYVDFLASVSPETLSDHSFSRYLKRFNVGEDCPVFDGLF
GFCQASAGGSIGAAVKLNRGDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKYH
KRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGVGSGKNYALNVP
LNDGMDDDSFRGLFRPLIQKVMEVYQPDAVVLQCGADSLAGDRLGCFNLSVKGHADCLRF
LRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHIEP
SNMENLNSPKDMEKIRNTLLEQLSRLPHAPSVPFQMTPSSEVPEEVEENMERRPKRRIWN
GEDYDSDAEENRKRPNNSEGPGVNNLTRDEVDGMEEDKNMDHQPR
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgatacttacggtggcgcttcacttccgtcaggtcctgacggccggaaacgt
cgagtgacctacttctatgagcccacaattggtgattactattacggccaaggtcatccg
atgaaacctcaccgtattcgcatggcccataacctcatcgttcactacggcctccaccgt
cggatggagatcaaccggccttaccctgccggtacggaggatatccagagattccactcc
gatgactatgtcgatttcctcgcctccgtgtcgcccgaaacgctgtcagatcactccttc
tctcgctatctcaagcgctttaatgttggtgaggactgccctgtttttgatggcttattc
ggcttctgccaggcctctgctggcggttccattggtgctgccgtcaagctcaatcgtggc
gatgctgatattgctatcaattgggctggtgggcttcatcacgctaagaagtctgaggcc
tccggtttctgttacgtcaatgatattgtattgggcatccttgagctgctgaagtatcac
aagcgtgtactatacattgacattgacgtccatcatggtgatggcgtggaggaggcattt
tatactactgacagagtaatgacggtctcctttcataaatttggggatttttttcctggg
acagggcacattaaggatgttggagtagggtctggtaaaaactatgcccttaatgtcccc
ctaaatgatgggatggatgatgacagttttcgtggtctgtttaggccactcattcagaaa
gttatggaggtgtatcagcctgatgcggttgtactccaatgtggagctgattcattagct
ggtgataggttggggtgcttcaacttatctgtgaagggccatgcagattgtcttcgtttc
ttgaggtcgtttaacgttcctttaatggtgttaggcggaggaggatatactatccgcaat
gtcgctcgctgttggtgttacgagacagcagttgctgttggagttgaaccagacaacaaa
ttgccttacaacgagtatttcgagtattttggacctgattatactcttcatatagaacca
tccaacatggagaatctaaattcccctaaagacatggaaaagataaggaacaccctgctg
gagcaactctctcgactcccacatgcccccagtgtacctttccagatgactccttcctca
gaagttccagaagaggtggaagagaacatggaacgtagacccaaacgccgcatctggaat
ggtgaggattatgattctgatgctgaagaaaacagaaagcgaccaaataacagtgaaggg
cctggtgtaaataatctgacgagggatgaagtagatggtatggaggaagataagaacatg
gaccatcaacctcgttga
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integrated database retrieval system