KEGG   Cucurbita maxima (winter squash): 111499812
Entry
111499812         CDS       T05246                                 
Name
(RefSeq) histone deacetylase 6-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
cmax  Cucurbita maxima (winter squash)
Pathway
cmax03082  ATP-dependent chromatin remodeling
cmax03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cmax00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    111499812
   03083 Polycomb repressive complex
    111499812
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cmax03036]
    111499812
Enzymes [BR:cmax01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     111499812
Chromosome and associated proteins [BR:cmax03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     111499812
   HDAC complexes
    Sin3A-HDAC complex
     111499812
    BRAF-HDAC complex
     111499812
    REST complex
     111499812
    SHIP complex
     111499812
    MiDAC complex
     111499812
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     111499812
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    111499812
  Chromatin remodeling factors
   NuRD complex
    111499812
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 111499812
NCBI-ProteinID: XP_023007272
UniProt: A0A6J1KY79
LinkDB
Position
Unknown
AA seq 465 aa
MADDTYGGASLPSGPDGRKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHR
RMEINRPYPAGTEDIQRFHSDDYVDFLASVSPETLSDHSFSRYLKRFNVGEDCPVFDGLF
GFCQASAGGSIGAAVKLNRGDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKYH
KRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGVGSGKNYALNVP
LNDGMDDDSFRGLFRPLIQKVMEVYQPDAVVLQCGADSLAGDRLGCFNLSVKGHADCLRF
LRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHIEP
SNMENLNSPKDMEKIRNTLLEQLSRLPHAPSVPFQMTPSSEVPEEVEENMERRPKRRIWN
GEDYDSDAEENRKRPNNSEGPGVNNLTRDEVDGMEEDKNMDHQPR
NT seq 1398 nt   +upstreamnt  +downstreamnt
atggcggatgatacttacggtggcgcttcacttccgtcaggtcctgacggccggaaacgt
cgagtgacctacttctatgagcccacaattggtgattactattacggccaaggtcatccg
atgaaacctcaccgtattcgcatggcccataacctcatcgttcactacggcctccaccgt
cggatggagatcaaccggccttaccctgccggtacggaggatatccagagattccactcc
gatgactatgtcgatttcctcgcctccgtgtcgcccgaaacgctgtcagatcactccttc
tctcgctatctcaagcgctttaatgttggtgaggactgccctgtttttgatggcttattc
ggcttctgccaggcctctgctggcggttccattggtgctgccgtcaagctcaatcgtggc
gatgctgatattgctatcaattgggctggtgggcttcatcacgctaagaagtctgaggcc
tccggtttctgttacgtcaatgatattgtattgggcatccttgagctgctgaagtatcac
aagcgtgtactatacattgacattgacgtccatcatggtgatggcgtggaggaggcattt
tatactactgacagagtaatgacggtctcctttcataaatttggggatttttttcctggg
acagggcacattaaggatgttggagtagggtctggtaaaaactatgcccttaatgtcccc
ctaaatgatgggatggatgatgacagttttcgtggtctgtttaggccactcattcagaaa
gttatggaggtgtatcagcctgatgcggttgtactccaatgtggagctgattcattagct
ggtgataggttggggtgcttcaacttatctgtgaagggccatgcagattgtcttcgtttc
ttgaggtcgtttaacgttcctttaatggtgttaggcggaggaggatatactatccgcaat
gtcgctcgctgttggtgttacgagacagcagttgctgttggagttgaaccagacaacaaa
ttgccttacaacgagtatttcgagtattttggacctgattatactcttcatatagaacca
tccaacatggagaatctaaattcccctaaagacatggaaaagataaggaacaccctgctg
gagcaactctctcgactcccacatgcccccagtgtacctttccagatgactccttcctca
gaagttccagaagaggtggaagagaacatggaacgtagacccaaacgccgcatctggaat
ggtgaggattatgattctgatgctgaagaaaacagaaagcgaccaaataacagtgaaggg
cctggtgtaaataatctgacgagggatgaagtagatggtatggaggaagataagaacatg
gaccatcaacctcgttga

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