Cucurbita maxima (winter squash): 111499891
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Entry
111499891 CDS
T05246
Name
(RefSeq) protein CHROMATIN REMODELING 35-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111499891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmax03400
]
111499891
DNA repair and recombination proteins [BR:
cmax03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
111499891
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_16
Motif
Other DBs
NCBI-GeneID:
111499891
NCBI-ProteinID:
XP_023007378
UniProt:
A0A6J1L7H6
LinkDB
All DBs
Position
Unknown
AA seq
882 aa
AA seq
DB search
MYGLYYERRKRLKLSTDGKDFPGTTTISAQKCDTPRQNKMKNSAKVIDYSDPFAINNLID
SLDCGQFGSVTKEIEVLVSSKMQILSPYIAKYPTLSSMLFGLGRSKECTEAMDHQASQLV
HNNLIDLEDDSAIDVRDNDVEKSQLPIVIIDSDEEESYVPRRIHPFQEVVLPGPPGQSLF
KDKVVVGRRASNGEEATPIGESETISKKDRGVYVGIEEDEDSEQANSEEDGLEDIWNDMK
MALECSKDLDVAIDSSSNQQTTDDTDCDHSFLLKEDLGHVCRICGVIGRGIETIFEFQYN
KGKKSTRTYMSESRNKDLGDLEVKISEDDLTVTEISAHPRHMKQMKPHQMEGFNFLISNL
VTDNPGGCILAHAPGSGKTFMIISFMQSFLAKYPQARPLVVLPKGILATWKKEFQIWQVE
DIPLYDFYSVKADNRAQQLTVLNQWVEHKSILFLGYKQFSTIVCEVETNASSTACQNILL
KVPTILILDEGHTPRNENTDILQALAKVRTPRKVVLSGTLYQNHVKEVFNIVNLVRPKFM
RSETSRPIIKRIMSRVDIPGVRKQFKTGVDSAFYDLVEHTLQKDKDFRRKVSVIHDLREM
TSKILHYYKGDFLDELPGLVDFTVVLNLTSKQKHEGEKVKKFNRKFKISSAGSAVYLHPK
LNVFSVNAVVTDDKIDEVIDKLDVKDGVKAKFFLNMLNLCATTGEKLLVFSQYLLPLKFM
ERLVVQKKGWSPGKETFMISGETTSEHREWSMERFNNSPDARVFFGSIKACGEGISLVGA
SRIIILDVHLNPSVTRQAIGRAFRPGQTKKVFAYRLVAADSPEEGDHSACFKKELIAKMW
FEWNEYCGYHDFEVTTVDVKDCGDNFLETPLLNQDVRVLYRR
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgtacggactgtattacgagagacgtaagagactaaaattatctactgatggaaaagat
ttccctggcaccaccaccatttctgcccaaaaatgtgacacaccgagacaaaacaaaatg
aagaactcggcgaaagtaattgattactctgatccgtttgccattaataatttgatcgat
agcttggattgtggtcagtttggaagtgtcactaaagagattgaagtccttgtttcgtct
aagatgcaaattttaagtccttacattgccaagtatcctacgctgtcgagtatgttattt
ggtctggggagaagtaaagagtgtacagaggcaatggatcatcaagcttcccaattggtt
cataataatctcattgatttggaggatgattctgccattgacgttcgtgacaatgatgtt
gagaaatcacaattgcctattgtaataattgattctgatgaggaagaaagctatgttccg
aggcgtatacatccttttcaagaggttgttctgcctggaccacctggacaaagtctcttc
aaggacaaagtggtagtgggacgccgggcttcaaatggggaggaagcaactcctattggt
gaaagtgaaactataagtaagaaagacagaggtgtttacgtcggtatagaagaggatgag
gacagcgaacaggctaacagtgaagaagatggtcttgaagatatttggaacgatatgaaa
atggcattggaatgttccaaggacttggatgtcgctatagattcatcatctaatcaacaa
actacagatgatacggactgtgatcattcttttctcttgaaggaggatcttggtcatgtt
tgtcgcatttgtggggttattggcagaggaattgagaccatttttgagtttcagtacaac
aagggtaagaagagcacaagaacatacatgtctgaatctcgcaacaaagatttaggtgac
cttgaagttaaaatttcagaagatgatttgactgtaactgaaatttctgcacaccctagg
catatgaagcaaatgaagcctcatcaaatggaaggtttcaatttccttataagcaacttg
gtaactgacaatcctggaggctgcattttggctcacgctcctggatctggaaaaaccttt
atgataatcagttttatgcaaagttttttagccaagtatccacaggccagaccattggtt
gtgcttcccaaaggaatcttggctacatggaaaaaagagtttcagatttggcaagtggaa
gatattccactctatgatttctattctgttaaagctgataatagggctcaacagctgaca
gtactgaatcagtgggtcgagcacaagagtattctgttcttaggatacaaacaattttcc
acaatcgtctgtgaggttgaaaccaatgcatcatcaactgcatgtcaaaatatattgctc
aaggttcctaccattcttattctagatgaggggcatactccaagaaatgagaacactgat
attttgcaagctcttgccaaagtcagaactccacgaaaagtggttctttctggaaccctt
tatcagaaccatgttaaagaggtattcaatatagtgaatcttgttcgaccgaagttcatg
agatccgaaacttctcgacctatcatcaagcgcatcatgtcaagagtggatatacctggt
gtgaggaagcagttcaaaacaggtgttgattctgctttttatgatttggtggaacataca
cttcaaaaggataaagatttcaggaggaaagtgagtgtcatccatgatttacgtgaaatg
accagtaagattttgcattactataaaggggattttctcgatgagctccctggattggtc
gactttaccgtggtgttgaatctcacttctaaacagaagcacgaaggagaaaaagttaaa
aagttcaataggaagttcaaaataagctctgccggcagtgctgtttatttacacccaaag
ttgaatgttttctctgtgaatgctgttgtaacggatgacaaaatagatgaggtcattgat
aagctggacgttaaagatggagtgaaggcaaaattctttcttaacatgctgaatttgtgt
gccactaccggggagaagctgctggttttcagccaatacctgctccctttgaaattcatg
gagagattggttgtgcagaagaaaggttggagtccaggaaaagaaaccttcatgatatct
ggtgaaacaacttctgagcatcgggaatggtcgatggaacgcttcaacaactcgcccgat
gctcgagtcttctttggttccattaaggcctgtggggaaggcatatctctagtaggggca
tcgcgtatcattattttggatgttcatctgaatccatcagtgacccgccaagcaattggt
cgtgctttccgtcctggccaaactaagaaagtctttgcttatagattggtggctgctgac
tctcctgaagagggggatcatagcgcttgcttcaagaaggaactgattgctaagatgtgg
ttcgagtggaacgagtattgtggctatcatgactttgaagtgacgactgttgacgtgaaa
gattgtggcgataattttctagaaaccccacttctaaatcaagatgtcagagttctgtac
agaaggtag
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integrated database retrieval system
