Cucurbita maxima (winter squash): 111500194
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Entry
111500194 CDS
T05246
Name
(RefSeq) vacuolar protein sorting-associated protein 35A-like
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111500194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmax04131
]
111500194
Membrane trafficking [BR:
cmax04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
111500194
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
Urb2
Motif
Other DBs
NCBI-GeneID:
111500194
NCBI-ProteinID:
XP_023007615
UniProt:
A0A6J1L3G7
LinkDB
All DBs
Position
Unknown
AA seq
790 aa
AA seq
DB search
MITDGVEDEEKWLAAGIAGLQQNAFYMHRSLDSNNLKDALKYSAQMLSELRTSKLSPHKY
YDLYMRAFDELRKLEIFFMEETKRGCSIIDLYELVQHAGNILPRLYLLCTVGSVYIKSKE
APAKDILKDLVEMCRGIQHPLRGLFLRSYLSQVSRDKLPDIGSEYEGDADTVNDAVEFVL
QNFTEMNKLWVRMQHQGPARDKEKREKERSELRDLVGKNLHILSQVEGVDLDMYKDIVLP
RVLEQVVNCKDEIAQFYLMECIIQVFPDEYHLQTLDILLGACPQLQPSVDIKTVLSQLME
RLSNYAASSAEVLPEFLQVEAFSKLSKAIGKVIEAQADMPTVGVVTLYSALLTFTLHVHP
DRLDYADLVLGACVKKLSGKGKIEDSKATKQIVALLSAPLEKYNDIVTTLKLSNYSHVLE
YLDGETIKVMATVIVQSITKNKTQISTAENVEALFELIRGLIKDLDGSPPDEVDEDDFKE
EQSSVARLIQMLYNDDPDEMFKIICTVKKHILTGGIKRLPFTVPALVFSSLKLVRQLQGQ
EENPFGDETATNPKKIFQLLTQTIESLSSVPAPELAFRLYLQCAEAANDCDLEPVAYEFF
TQAYILYEEEISDSKAQVTALHLIIGTLQKMHVFGVENRDTLTHKATGYSAKLLKKSDQC
RAVYACSHLFWLDDHDNMKDGERVMLCLKRALRIANAAQQMSNATRGSTGPVSLFIEILN
KYLYFFEKGNPQITVATIQGLIELITTEMQSDTTSPDSSADAFFASTLRYIEFQKQKGGA
VGEKYEPIKV
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgatcactgacggagttgaagacgaagagaagtggcttgctgctgggatcgccggtctc
cagcagaatgccttctacatgcaccgatctctggactccaacaatctcaaagatgccttg
aagtattctgcgcagatgctgtctgagctacggacttcgaagctttcccctcataaatac
tacgacttatacatgcgagcgtttgacgagttgaggaagctagaaattttctttatggag
gagacgaagcggggttgctcaataatcgacttgtacgaacttgtgcagcatgctggcaac
atattgcccagactgtaccttctttgtactgtgggatcggtgtatatcaagtccaaggag
gctcctgcaaaagatattcttaaagatctggttgagatgtgccgcggtattcagcatccc
ttacgtgggttatttttaaggagttatctttctcaagtcagtagggataagctacctgat
attggttcagaatatgaaggagatgcagacactgtgaacgatgcagttgaatttgtactc
caaaatttcacagaaatgaacaaactttgggtacgaatgcagcatcagggacctgcccgg
gacaaggagaaacgggagaaggaaaggagcgagctacgtgatcttgttggaaagaatctg
catattctcagtcaggtggagggtgttgaccttgatatgtacaaggatattgtacttcct
agagtcttagagcaggttgttaattgtaaagatgaaattgctcaattttatttgatggaa
tgcattattcaagtatttcctgatgagtatcacttacaaaccctggatattttgttgggt
gcctgcccccaacttcagccatctgttgatatcaagactgtgttgtcccaattaatggag
aggctttcaaattatgctgcttcaagtgcagaagtgttaccagaattcttgcaagtcgaa
gctttctcaaaactgagcaaagccattgggaaggtgatagaagcacaggctgatatgcct
acagtgggagttgtaactttatactcagcacttctcacatttacacttcatgttcatcca
gatcgtcttgattatgcagatcttgttttgggagcatgtgtgaagaaactctctggtaaa
gggaaaattgaagacagcaaggcaacaaagcagattgttgcccttttgagtgcgccattg
gaaaaatataatgacattgtcactacattgaagctatcaaactattcacatgtcttggag
taccttgatggtgaaacgatcaaagtgatggcaacagttattgtacaaagcataacaaag
aataaaactcaaatatctactgccgaaaatgttgaggcattatttgaattgataagaggg
cttatcaaggatttagatggatctcctcctgatgaggttgatgaagatgatttcaaggag
gagcaaagttctgttgctcgtcttattcagatgttgtataatgatgacccagatgaaatg
tttaagataatctgtactgtcaagaagcatatcctgactggaggaataaagcgtctgcca
tttaccgttcctgcccttgttttttcatctctcaagttggttaggcaattgcaaggccag
gaagaaaatccttttggagatgagacagcaactaacccgaagaaaatttttcagctatta
actcagaccattgagagcctttcaagtgttccagccccagaattggcgtttcggttgtat
ctacaatgtgctgaggctgcaaatgattgtgatttagaacctgttgcttacgaatttttt
acccaagcatacattctttatgaagaagaaatttcagattcaaaagctcaagttactgca
ttacatttaataataggcactcttcagaagatgcacgtttttggtgttgaaaacagggat
actttaacccacaaagccactgggtactccgcaaagcttttaaaaaagtctgatcaatgc
cgagctgtttatgcttgctcgcatctcttctggcttgatgatcatgataatatgaaggat
ggtgagagggtgatgctttgcctaaagcgtgcattaagaatagcaaatgctgctcagcaa
atgtcgaatgcaacaaggggtagcaccgggccagtgtcgcttttcattgagatactgaac
aaatacttgtattttttcgagaagggcaacccgcagatcacggtagctaccatccagggc
ctaattgaattgatcacaactgaaatgcaaagcgacactactagtccagattcatcggca
gatgcattctttgccagcactctccggtacattgagttccaaaagcagaaaggtggtgca
gtgggtgagaaatacgagcccataaaagtgtag
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