Cucurbita maxima (winter squash): 111500306
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Entry
111500306 CDS
T05246
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111500306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmax03019
]
111500306
Messenger RNA biogenesis [BR:
cmax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
111500306
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
111500306
NCBI-ProteinID:
XP_023007809
UniProt:
A0A6J1L601
LinkDB
All DBs
Position
Unknown
AA seq
470 aa
AA seq
DB search
MIHCLVIEKMESDLGKLFIGGISWDTDEERLRDYFGNYGEVVEAVIMRDRTTGRARGFGF
VVFADPVVAERVILEKHIIDGRTVEAKKAVPKDDQNMLNRNIGSSIQGSPSSGRTKKIFV
GGLASTVTEADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEVVDRVLHKTFHE
LNGKMVEVKRAIPKEQTPGPNRSPLVGYNFGMSRASGFLNNYTQGYNMSPLGGIGMRSDG
RLSPFLSPRTGVPPLGLNFEQGLRQGYGRTMNIMNSQAQEQMLSSYYNGNSNRYIAPIGY
SGGNGRGDSPLNSSTWNVWGNGSMSTASVNSSVSGMGNFRVAYGNNDDNWNLPAVSNHVG
GENVPDNGYAVRDNGVGFRGGYGGNVVSNATRKAFAETTNGFERSYRELYRDQVVHNDVT
WQSTTPELDDSMAFGYGLGNLASDDPTKSSESSLANYDISSRQSTRGIAA
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgattcattgtttggtaatagaaaagatggaatcagatcttggcaaactctttattggc
ggaatttcttgggatactgatgaagaacgtcttagggattattttggaaactatggcgaa
gtggttgaagctgtgatcatgagggatcgcaccactggtcgtgctcgtggctttggcttt
gttgtctttgcagatcctgttgttgctgagagagtcattttggagaagcatatcatcgat
ggccgcactgttgaagctaaaaaggctgttccaaaggatgatcagaacatgttgaataga
aacattggtagtagcattcaaggttctcctagctcgggacgaacgaaaaagatttttgtt
ggaggtttagcttcaacagtcacagaggcagactttcagaagtactttgatcagtttggc
acaatcactgatgttgttgttatgtatgatcacagcacgcaaaggccgagaggttttggc
ttcattacgtacgactcggaggaggtcgtcgaccgtgtgctgcataaaacctttcatgaa
ctcaatggaaaaatggttgaggttaaaagagcaatcccaaaagagcaaaccccagggcct
aaccggagccctcttgtaggatataacttcggtatgagtagagctagtggatttcttaac
aactatactcaaggctataatatgagtcctctcggaggtattggaatgcggtccgatggt
aggttgagtccttttcttagccctcgaaccggggttcctcctttaggtttgaattttgag
caagggctgaggcaaggctatggtaggactatgaacattatgaatagtcaagcacaggaa
caaatgttgagttcctattataatggcaattcgaataggtacattgccccgattggctat
agcggaggaaatggacgaggcgattctccgttaaactcgagtacgtggaatgtctgggga
aatggaagtatgagcactgcttccgtgaactcttctgtctctggaatgggtaacttcaga
gtggcatatggaaataacgatgataattggaatttgcctgctgtttctaatcatgttgga
ggggagaatgttcctgataatggatatgcagttcgagacaatggcgtcgggttcagagga
ggctatggaggaaatgtagtctcgaatgcaacacgaaaagcatttgctgaaacaaccaat
ggtttcgagaggtcatacagggaattatatcgtgatcaagtcgtgcacaatgatgtaact
tggcagtctaccactcctgaactcgatgattctatggcttttggttatggtcttggtaac
ctcgcttcagatgatccaaccaaaagttcagagagttctctagcaaattacgacatttcg
agcagacaatcaactagaggaattgctgcgtag
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