| Entry |
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| Symbol |
rpoB
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta
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| KO |
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| Organism |
cmb Caulobacter mirabilis
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:cmb00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CSW64_03120 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:cmb03021]
CSW64_03120 (rpoB)
03400 DNA repair and recombination proteins [BR:cmb03400]
CSW64_03120 (rpoB)
Enzymes [BR:cmb01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CSW64_03120 (rpoB)
Transcription machinery [BR:cmb03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CSW64_03120 (rpoB)
DNA repair and recombination proteins [BR:cmb03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CSW64_03120 (rpoB)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
627371..631441
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| AA seq |
1356 aa
MAQSFTGKKRIRKSFGRIPEAVQMPNLIEVQRSSYEQFLQREVRVSERRDEGIEAVFKSV
FPIKDFNERAVLEYVSYEFEEPKYDVEECIQRDMTYAAPLKVKLRLIVFEMEEETGAKSV
KDIKEQDVYMGDIPLMTDKGTFIVNGTERVIVSQMHRSPGVFFDHDKGKTHSSGKLLFAA
RVIPYRGSWLDFEFDAKDIVYVRIDRRRKLPATTFLYALGMDGEEILTTFYDVVPFEKRD
GGWATPYKPERWRGVKPEFALIDADSGEEVAPAGQKISARAAKKLADGGLKTLLLGPEAL
TGRYLARDEVNPETGEIYAEAGDELDAAVIAALEEKGFASIDVLDIDHVTVGAYMRNTLR
VDKNSLREDALFDIYRVMRPGEPPTVEAAEAMFKSLFFDQERYDLSSVGRVKMNMRLELD
VSDEVRVLRKEDVLEVLKVLVGLRDGRGEIDDIDNLGNRRVRSVGELLENQYRVGLLRME
RAIKERMSSVDIDTVMPHDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITHKRRLSA
LGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATHARVNKYGFIESPYR
RVVDGKPVDEVIYMSAMEEPKHVIAQANIPMADGVIADDLVPGRVNGEPGLLQKEQVDLM
DVSPKQVVSVAAALIPFLENDDANRALMGSNMQRQAVPLVQSDAPLVGTGMEDVVARDSG
AVVVARREGVVEQIDGTRIVIRATNETDPTKPGVDIYRLSKFQRSNQNTCINQRPLVRVG
DKIQAGDIVADGPSTDLGELALGRNALVAFMPWNGYNFEDSILISERIVRDDVFTSIHIE
EFEVMARDTKLGPEEITRDIPNVGEEALRNLDEAGIVAIGAEVMPGDILVGKVTPKGESP
MTPEEKLLRAIFGEKASDVRDTSLRLPPGVAGTIVEVRVFNRHGVDKDERALAIERAEIE
RLGKDRDDEFAILNRNMTARLRELIVGKTAVSGPKGLSRGEVTVEKLEEIAPGLWWQIAL
DDEKAMGELEALRRQFDEARKRLDRRFEDKVDKLQRGDELPPGVMKMVKVFVAVKRKLQP
GDKMAGRHGNKGVISKILPIEDMPHLEDGTAVDVVLNPLGVPSRMNVGQIFETHLGWAAA
GLGKQIANLLEAWQHGGQKAELTKRLREIYGPDEELPEDEGELVELARNLSKGVPFATPV
FDGAHIADIEDHLESAGLARSGQSILFDGQTGEQFKRPVTVGYIYMLKLHHLVDDKIHAR
SIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRTKVYE
SIVRGDDTFEAGIPESFNVLVKEMRSLGLNVELENS |
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| NT seq |
4071 nt +upstreamnt +downstreamnt
atggcgcaatccttcaccggcaagaagcggatccggaagtcgttcggccgcatccccgaa
gctgtgcagatgccgaacctcatcgaggttcagcgctcctcctacgaacagttcctgcag
cgcgaggttcgcgtctcggaacgtcgggacgagggcatcgaggcggtcttcaagtcggtg
ttcccgatcaaggacttcaacgagcgcgccgtgctcgagtacgtctcctacgagttcgag
gagccgaagtacgacgtcgaggaatgcatccagcgcgacatgacctatgccgcgccgctg
aaggtcaagctccgcctcatcgtcttcgagatggaagaggaaaccggcgccaagtcggtc
aaggacatcaaggagcaggacgtctacatgggcgatatcccgctcatgacggacaagggc
accttcatcgtcaacgggaccgagcgcgtgatcgtgtcccagatgcaccgctcgccgggc
gtcttcttcgaccacgacaagggcaagacccacagctcgggcaagctgctgttcgccgcc
cgcgtgatcccgtaccgcggcagctggctcgacttcgagttcgacgccaaggacatcgtc
tacgtccgtatcgaccgtcgccggaagctgccggccacgaccttcctctatgccctgggc
atggacggcgaagagatcctgaccaccttctacgacgtcgttccgttcgagaagcgtgac
ggcggctgggccaccccgtacaagcccgagcgctggcgcggcgtgaagccggagttcgcc
ctgatcgacgccgacagcggcgaggaagtcgctccggccggtcagaagatcagcgcccgc
gccgccaagaagctggccgacggcggtctgaagaccctgctgctcggaccggaggccctg
accggccgctacctggcccgcgacgaagtgaacccggaaaccggcgagatctacgccgag
gccggcgacgagctggacgcggccgtgatcgcggccctggaagagaagggcttcgccagc
atcgacgtgctcgacatcgaccacgtcaccgtcggcgcctacatgcgcaacaccctgcgc
gtggacaagaacagcctgcgtgaagacgcgctgttcgacatctatcgcgtcatgcgtccg
ggcgagccgccgaccgtcgaagccgccgaagcgatgttcaagtcgctgttcttcgaccag
gagcgctacgacctgtcgtcggtcggccgcgtgaagatgaacatgcgcctggagctggac
gtctcggacgaggtccgtgtcctgcgcaaggaagacgtcctggaagtcctgaaggtcctg
gtgggcctgcgcgacggccgcggcgaaatcgacgacatcgacaacctcggcaaccgccgc
gtccgttcggtcggcgagctgctcgagaaccagtaccgtgtcggcctgctccgcatggag
cgcgcgatcaaggaacgcatgagctcggtcgacatcgacacggtcatgccgcacgacctg
atcaacgcgaagcccgcggcggccgccgttcgtgaattcttcggctcctcgcagctgtcg
cagttcatggaccagaccaacccgctgtcggaaatcacccacaagcgccgtctctcggcg
cttggcccgggcggtctgacccgcgagcgcgcaggcttcgaagtccgcgacgtgcacccg
acccactacggccggatctgcccgatcgagacgccggaaggtccgaacatcggcctgatc
aactcgctggccacccacgcccgcgtgaacaagtacggcttcatcgaaagcccgtaccgt
cgcgtggtcgacggcaagccggtcgacgaagtgatctacatgtcggccatggaagagccg
aagcacgtgatcgcccaggccaacatcccgatggccgacggcgtgatcgccgacgacctg
gtcccgggccgcgtcaacggcgaacccggcctgctccagaaggaacaggtcgacctgatg
gacgtctcgcccaagcaggtcgtctcggtcgccgcggcgctgatcccgttcctcgagaac
gacgacgccaaccgcgcgctgatgggctcgaacatgcagcgtcaggccgtgccgctcgtc
cagtcggacgcgccgctggtcggcaccggcatggaagacgtcgtggctcgtgactcgggc
gccgtggtggtggcccgtcgcgagggcgtggtcgagcagatcgacggtacgcgtatcgtc
atccgcgccaccaacgagaccgatccgaccaagccgggcgtcgacatctaccgcctgtcg
aagttccagcgttccaaccagaacacctgcatcaaccagcgtccgctggtccgcgtgggc
gacaagatccaggccggcgacatcgtcgccgacggtccgtcgaccgacctgggcgaactg
gccctgggccgcaacgcgctcgtcgcgttcatgccctggaacggctacaacttcgaagac
tcgatcctgatctccgagcgtatcgtgcgcgacgacgtcttcacctcgatccacatcgag
gaattcgaagtcatggcccgcgacaccaagctcgggccggaagagatcacccgcgacatc
ccgaacgtcggcgaggaagccctgcgcaacctcgacgaagcgggcatcgtggcgatcggc
gccgaggtcatgccgggcgacatcctggtcggcaaggtcacgcccaagggcgagtccccg
atgacgccggaagagaagctgctgcgcgccatcttcggcgagaaggcttcggacgtccgc
gacacctcgctccgtctgccgcccggcgtggccggcaccatcgtcgaagtgcgcgtgttc
aaccgccacggcgtcgacaaggacgagcgcgccctggccatcgagcgcgccgagatcgaa
cgcctgggcaaggaccgcgacgacgagttcgcgatcctgaaccgcaacatgaccgcgcgc
ctgcgcgagctgatcgtcggcaagaccgccgtctccggtcccaagggcctgagccgcggc
gaagtcaccgtcgagaagctcgaagagatcgcgccgggcctgtggtggcagatcgccctc
gacgacgagaaggccatgggcgaactggaagccctgcgccgtcagttcgacgaggcccgc
aagcgtctcgaccgtcgcttcgaggacaaggtcgacaagctgcagcgcggcgacgaactg
cccccgggcgtcatgaagatggtcaaggtcttcgtggccgtgaagcgcaagcttcagccg
ggcgacaagatggccggccgtcacggcaacaagggcgtcatctccaagatcctgccgatc
gaggacatgccgcacctggaagacggcaccgccgtcgacgtcgtgctgaacccgctgggc
gtgccctcgcgcatgaacgtcggtcagatcttcgagacgcacctgggctgggccgcggcc
ggtctcggcaagcagatcgccaacctgctggaagcctggcagcacggcggtcagaaggcc
gagctgaccaagcgcctgcgcgagatctacggccccgacgaggagctgccggaggacgaa
ggcgagctggtcgaactggcccgcaacctgtccaagggcgtgcctttcgcgaccccggtc
ttcgacggcgcccacatcgccgacatcgaggatcacctggagtcggcgggcctcgcccgc
tcgggtcagtcgatcctgttcgacggccagacgggcgagcagttcaagcgtccggtcacg
gtcggctacatctacatgctgaagctgcaccacctggtcgacgacaagatccacgcccgt
tcgatcggcccgtacagcctcgtcacgcagcagccgctgggtggtaaggcccagttcggt
ggtcagcgcttcggggaaatggaggtctgggccctggaagcctacggcgccgcctacacc
ctgcaggaaatgctgacggtgaagtcggacgacgtggccggccggaccaaggtctacgag
tccatcgtgcgcggcgacgacacgttcgaagcgggtatcccggaaagcttcaacgtgctg
gtcaaggaaatgcgctcgctgggcctgaacgtggagctggagaacagctga |
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