Caulobacter mirabilis: CSW64_10460
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Entry
CSW64_10460 CDS
T05166
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cmb
Caulobacter mirabilis
Pathway
cmb03410
Base excision repair
cmb03430
Mismatch repair
cmb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CSW64_10460 (recJ)
03430 Mismatch repair
CSW64_10460 (recJ)
03440 Homologous recombination
CSW64_10460 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmb03400
]
CSW64_10460 (recJ)
DNA repair and recombination proteins [BR:
cmb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CSW64_10460 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CSW64_10460 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CSW64_10460 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
RecJ_OB
DHH
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ATQ42801
UniProt:
A0A2D2AXV0
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All DBs
Position
2119387..2121189
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AA seq
600 aa
AA seq
DB search
MADGPGEVGFLGVRRSLLGRAWRRRPADAALVRDHQLRHGLSEPLARALASRGIGADAAA
DFLSPTLKAQFPDPSTFRDMDRAAEILVDAAERGRPMAVFADYDVDGASSAAQLVRWFRA
MGRDLPIYVPDRITEGYGPSPAAFRRLKEQGAELVVTVDCGAAAHDALIAAGQIGLEVVV
VDHHLMRGDPPPAAALVNPNRPDDESGQGHLAAAGVTFVLLAALNREARRRGLFEGREAP
DIMQWLDLAAMGAVCDVTSLTGFNRAVAAQGLRVMSGWRNPGLKALLDVAGAQGPATTFH
AGFILGPRINAGGRIGRSDLGARLLSTDDPLEAAALAAELNELNASRKEVEKAVIDEAVG
FIERDNLDPDAPVIVVAGDDWHPGVVGIAAARLRERYRKPVIVVGVDRPSDTGKGSGRSQ
PGVNLGRVVQAAFDEGLLLAGGGHAMAAGLTVRPAMIPELRAFLADRLKDEMVDAAAADA
VEIDALVSPAGATRALWNDFQRLAPFGPGNPEPVFAVSDARVDRPMMMKGGHIRCTLLDA
GGSGRLKAVAWRAEDTELGARLMAGGSALHVVGRLKPDDWQGREGVQLEIEDAADPRMAG
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggccgacggcccaggcgaagtcggcttcctaggggtccgacgctctctcctgggccgg
gcctggcgccggcggccggccgacgccgccctggtccgcgaccaccagctgcgccacggc
ctttccgagccgctggcgcgcgccctggcctcgcgcgggatcggggcggatgccgccgcc
gacttcctgtctccgaccctgaaggcccagttcccggacccgtcgacgttccgggacatg
gaccgggccgccgagatcctggtcgacgccgccgagcgcggccggccgatggcggtgttc
gccgactacgacgtcgacggcgcgtcgagcgccgcccagctggtccgctggttccgcgcc
atggggcgcgacctgcccatctacgttcccgaccgcatcaccgaggggtatggccccagc
ccggccgccttccgccgcctgaaggagcagggcgccgagctggtggtgacggtcgattgc
ggcgcggccgcgcacgacgccctgatcgccgccggccagatcgggctcgaggtggtggtt
gtcgaccaccacctgatgcgcggcgacccgccgccggccgccgccctggtcaatcccaac
cgtccggacgacgagtcggggcaggggcacctggccgctgcgggggtgaccttcgttctg
ctcgccgccctgaaccgcgaggcgcgccgtcgcggcctgttcgaggggcgcgaggctccg
gacatcatgcagtggctggacctggccgccatgggcgcggtctgcgacgtcaccagcctg
accggcttcaaccgggcggtggccgcccaggggctgcgggtgatgtccggctggcgcaac
ccgggcctgaaggcgctgctcgatgtggcgggcgcgcagggaccggcgaccaccttccat
gccggcttcatcctggggccgcggatcaacgccggcggacgcatcggccggtcggatctc
ggcgcgcggctgctgtcgaccgacgatccgctggaggccgccgccctggccgccgagctg
aacgagctgaacgcttcccgcaaggaggtcgagaaggcggtcatcgacgaggcggtcggc
ttcatcgagcgcgacaacctcgatcccgacgctccggtgatcgtggtcgccggcgacgat
tggcatccgggcgtcgtcggcatcgccgcagcgcgtctgcgcgagcgctaccgcaagccg
gtgatcgtcgtcggcgtggaccgcccctcggacaccggcaagggctcgggccgctcgcag
ccgggcgtcaatctggggcgggtggtgcaggcggccttcgacgagggactgctgctggct
ggcggcggccatgccatggccgcgggcctgacggtgcgcccggcgatgatcccggagctg
cgcgccttcctggcggaccggctgaaggacgagatggtcgacgcggccgccgcggacgcc
gtcgagatcgacgccctggtcagcccggcgggcgccacgcgcgcgctgtggaacgacttc
cagcggctggcgccgttcgggccgggcaatcccgagccagtgttcgccgtctccgacgcc
cgcgtcgaccggccgatgatgatgaagggcggccacatccgctgcaccctgctggacgcc
ggcggctcggggcggctgaaggcggtggcctggcgcgccgaggacaccgagctgggcgcg
cggctgatggccgggggctcggcgctgcacgtcgtgggccgcctgaagcccgacgactgg
cagggccgcgagggcgtccagctggagatcgaggacgccgccgacccccggatggcgggc
tag
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