Caulobacter mirabilis: CSW64_16785
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Entry
CSW64_16785 CDS
T05166
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
cmb
Caulobacter mirabilis
Pathway
cmb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CSW64_16785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmb03019
]
CSW64_16785
Enzymes [BR:
cmb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CSW64_16785
Messenger RNA biogenesis [BR:
cmb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CSW64_16785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
ATQ43928
UniProt:
A0A2D2B106
LinkDB
All DBs
Position
3535759..3537201
Genome browser
AA seq
480 aa
AA seq
DB search
MTDFASLGLAKPLLSALAAEGYTKPTPIQQQAIPLVLEGKDVLGIAQTGTGKTAAFALPI
LQRLAENRRPAPRRGCRALILSPTRELATQIGDSFKTYGANMGLSVQVVFGGVKYGPQVR
ALAGGVDVLVAAPGRLIDHINEKVANLSETEIFVLDEADQMLDMGFIVPIRRIVKHLPHK
RQNLFFSATMPSEIEKLAGELLHNPSKVSVTPQSTTVEKIEQKILFVEAARKRALLAELF
DDAAFKRVLVFTRTKRGADRVAKGLNTIGVEAASIHGDKTQGQRERALAAFKAGSMRALV
ATDIAARGIDVDGVTHVIQYELPNVPEAYVHRIGRTARAGANGAAVSLVADDERNLLKDI
EKVTRQRIPSWDRRNDKVLGQAQAALSATDPIKTERHRDPRAAGGGGRNGGGGRGGQQNR
NKKPQALDASGKPQPERGQRARHRPAGYEPLAAAGDAPPKRKRNRNRNRGKGGGGQGAQA
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacttcgcttcgcttggcctggccaagccgcttctctccgcgctggccgccgag
ggctacaccaagccgaccccgatccagcagcaggccatcccgctggtgctcgagggcaag
gacgtgctgggcatcgcccagaccggcaccggcaagaccgccgccttcgccctgccgatc
ctgcagcgcctggccgagaaccgccgcccggcgccgcgccgcggctgccgcgcgctgatc
ctgtcgccgacccgcgagctcgccacccagatcggcgacagcttcaagacctacggcgcc
aacatgggcctgtccgtccaggtggtgttcggcggcgtgaagtacggcccgcaggtccgc
gccctggccggcggcgtcgacgtgctggtggccgcgcccggccgcctgatcgaccacatc
aacgagaaggtcgccaacctgtcggagacggagatcttcgtcctcgacgaggccgaccag
atgctcgacatgggcttcatcgtgccgatccgccggatcgtgaagcacctgccgcacaag
cgtcagaacctgttcttctcggccaccatgccgagcgagatcgagaagctggccggcgag
ctgctgcacaacccatcgaaggtgtcggtgacgccgcagtcgaccacggtcgagaagatc
gaacagaagatcctgttcgtggaggccgcccgcaagcgcgccctgctggccgagctgttc
gacgacgccgccttcaagcgcgtgctggtcttcacccggaccaagcgcggcgccgaccgc
gtggccaaggggctgaacaccatcggcgtcgaggccgcctcgatccacggcgacaagacg
cagggccagcgcgagcgcgccctggcggcgttcaaggccggttcgatgcgggccctggtc
gcgaccgacatcgccgcccgcggcatcgacgtcgacggcgtgacccacgtcatccagtac
gagctgccgaacgtgccggaagcctacgtccaccgcatcggccgcacggcccgcgccggc
gccaacggcgcggcggtgtcgctggtcgccgacgacgagcgcaatctgctgaaggacatc
gagaaggtcacccgccagcgcatccccagctgggatcgccgcaacgacaaggtcctgggg
caggcccaggccgccctctcggcgaccgacccgatcaagaccgagcgtcatcgcgacccg
cgggccgcgggcggcggcggtcgtaacggcggcggcggccgcggcggccagcagaaccgc
aacaagaagcctcaggcgctggacgcctcaggcaagccgcagccggaacgcggccagcgc
gcccgccaccgcccggccggctacgagcccctcgccgccgccggcgacgccccgcccaag
cgcaagcggaaccgcaatcgcaaccgcggcaaaggcggcggcggccagggcgctcaggcg
tag
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