Clavibacter nebraskensis: CMN_00018
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Entry
CMN_00018 CDS
T02530
Symbol
pbpA
Name
(GenBank) penicillin-binding protein, transpeptidase
KO
K05364
penicillin-binding protein A
Organism
cmc
Clavibacter nebraskensis
Pathway
cmc00550
Peptidoglycan biosynthesis
cmc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cmc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CMN_00018 (pbpA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cmc01011
]
CMN_00018 (pbpA)
Peptidoglycan biosynthesis and degradation proteins [BR:
cmc01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
CMN_00018 (pbpA)
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
CCE74000
UniProt:
A0AAI9EHJ9
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Position
complement(19943..21394)
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AA seq
483 aa
AA seq
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MNRELKRVSVFVLAMFVALFVAASVIQVVSAPTLQADPRNSRTIIASYSAERGSILVDGT
PIASSVPVDDRYKFLRTYAQPDLYSAVTGYYTLGQGSTGLEDSMNDVLSGTSGTQFFDSL
TRTFTGQDPKGASVELTIDPKVQQAAYDALGSLQGSVVAIEPKTGRILAMVSKPGYDPNT
LASHDRAAVQQSYSSLLKDPANPLIDRAVNSLNPPGSTFKLITAAAAIESGQYTPDSLLP
NPPTFTLPGTGTVITNAGEGACGPEAEVSIATALRLSCNIPFAQLGIALGSERIAAMADA
FGYGKSIDVPMASAKSVFSPDLDDAQTAQSAFGQLDVRATPLQTAMVTAGIANGGEVMKP
SVVDSVLNPDLSELSGFSPSRFADPISKETADTMTRMMIDDVQSGVASNARISGVDVAGK
TGTAQNGSDDPYTLWFTGFAPAADPQVAVAVLVEDGGGRGRSGSGNTLAAPVAKKVIEAV
LDR
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccgcgagctcaagcgcgtctccgtgttcgtcctggccatgttcgtggccctgttc
gtcgcggcgtcggtcatccaggtcgtctccgcgccgaccctccaggcggatccgcgcaac
agccgcaccatcatcgcgagctactcggccgagcgcggctcgatcctcgtcgacggcacg
cccatcgcctcctcggtgccggtcgacgaccgctacaagttcctccgcacctacgcgcag
cccgacctctacagcgcggtcaccggctactacacgctcggccagggatccacgggcctc
gaggactccatgaacgacgtcctcagcggcacgagcggcacgcagttcttcgacagcctc
acgcgcaccttcaccgggcaggacccgaagggcgcgtcggtcgagctcacgatcgacccg
aaggtgcagcaggcggcgtacgacgcgctcgggtcgctgcagggctccgtggtcgcgatc
gagccgaagaccggccgcatcctcgcgatggtgtccaagcccggctacgacccgaacacg
ctggcgtcgcacgaccgcgcggccgtgcagcagagctactcgtcgctcctgaaggacccg
gcgaacccgctcatcgaccgcgcggtgaacagcctcaacccgcccggatccacgttcaag
ctcatcaccgcggccgccgccatcgagtcgggccagtacacgcccgactcgctgctgccc
aacccgccgaccttcacgctgcccggcaccggcacggtcatcaccaacgccggcgaaggg
gcgtgcggacccgaggcggaggtcagcatcgcgaccgcgctgcgcctcagctgcaacatc
ccgttcgcgcagctcggcatcgcgctcggatccgagcggatcgcggccatggccgacgcc
ttcggatacgggaagtcgatagacgtgcccatggccagcgccaagagcgtcttctccccc
gacctcgacgacgcccagaccgcgcagtccgcgttcgggcagctcgacgtgcgcgccacc
ccgctgcagaccgccatggtcacggccggcatcgcgaacggcggcgaggtcatgaagccc
agcgtcgtcgacagcgtcctcaaccccgacctgagcgagctctccggcttctcccccagc
cgcttcgccgacccgatctcgaaggagaccgccgacaccatgacccggatgatgatcgac
gacgtccagagcggcgtcgcgtcgaatgcgagaatcagtggcgtcgacgtggccggcaag
acgggcaccgcccagaacggcagcgacgacccgtacacgctgtggttcaccggcttcgcg
ccggcggcggacccgcaggtggcggtcgcggtcctggtcgaggacggcggcggacgagga
cgatcgggctcggggaacaccctcgccgcccccgtggcgaagaaagtgattgaggcggtg
ctggacagatga
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