Clavibacter nebraskensis: CMN_00229
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Entry
CMN_00229 CDS
T02530
Name
(GenBank) putative transcriptional regulator, ROK family
Organism
cmc
Clavibacter nebraskensis
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ROK
MarR_2
HTH_IclR
HTH_24
HTH_11
MarR
HTH_27
HTH_36
HTH_20
TrmB
Motif
Other DBs
NCBI-ProteinID:
CCE74204
UniProt:
M5B668
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Position
215290..216588
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AA seq
432 aa
AA seq
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MTGDETGRAVPLAPDPRSREIPPAGDARSRGTTPDHVRRSNLATVLQIVHETGPASRSEL
TRETGLNRSTIAALVGELQELGLVVESEPPGTNRVGRPSPIVSADPRVVVLAVNPEIDAV
TVGLVGLDGVVQQRIRRDTDGIPTAAQAADLAGAIIAELRADLLATRPDARVLGIGVAVP
GLVRFDGGLVRLAPHLGWVDEPFAALLAEATGLPALAANDASLAAVAEGRFGSGRDVDDL
VYLNGGASGVGGGVLIGRRPFGGAEGYGGELGHTLVDSGGELCHCGAVGCLETTVGQDAL
LEVTGLPRARADELGDVLAAALEAGDPAVTREVERQIDNLAVALRNVVNIFNPSLVVLGG
FLGSLHAADPDRILARATAQALPGAREALRIRRAALGPDRLMIGAAELAFARVLVDPSGV
MRAAADAERTTA
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
gtgaccggcgacgagacgggccgcgccgtgccgctcgcgccggatccccgctcccgggag
atcccgcccgctggcgacgcccgctcccgcggcaccacgcccgaccacgtccgccgctcc
aacctcgcgaccgtgctgcagatcgtgcacgagaccggccccgcgtcgcgctccgagctg
acccgcgagaccgggctcaaccgctccaccatcgccgcgctcgtgggcgagctgcaggag
ctcggcctcgtcgtcgagtcggagccgcccggcaccaaccgcgtcggccggccgagcccc
atcgtctcggccgacccgcgcgtcgtcgtcctcgccgtgaaccccgagatcgacgccgtc
acggtcgggctcgtcggcctcgacggcgtggtgcagcagcggatccgccgcgacaccgac
gggatccccaccgccgcgcaggccgccgacctcgccggcgcgatcatcgccgagctgcgc
gccgacctcctggccacccgccccgatgcgcgcgtgctcggcatcggcgtcgcggtcccc
ggcctcgtgcgcttcgacggcgggctcgtccgcctcgccccgcacctcggctgggtcgac
gagccgttcgccgcgctcctcgccgaggccacggggctccccgcgctcgccgccaacgac
gcgagcctcgcggccgtcgcggaggggcggttcggatccggccgcgacgtcgacgacctc
gtctacctcaacggcggcgcatcgggcgtcggcggcggcgtgctcatcggtcggcgcccg
ttcggcggcgcggagggctacggcggcgagctcggccacacgctcgtcgactccggcggc
gagctctgccactgcggggcggtcggctgcctcgagacgacggtcggccaggacgcgctg
ctcgaggtcacgggcctcccgcgcgcccgcgccgacgagctgggcgacgtgctcgcggcg
gcgctcgaggcgggggatccggcggtcacccgcgaggtcgagcggcagatcgacaacctg
gcggtcgcgctccgcaacgtcgtcaacatcttcaacccgtcgctcgtggtgctcggcggg
ttcctcgggtcgctgcacgcggcggatcccgaccggatcctcgcccgcgccaccgcccag
gcgctccccggcgcgcgcgaggccctgcggatccgccgcgccgccctcggccccgaccgg
ctgatgatcggcgcggccgagctggccttcgcgcgcgtgctcgtggatccgtcgggcgtg
atgcgcgccgccgccgacgcggagcgcaccacggcgtga
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