Clavibacter nebraskensis: CMN_00278
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Entry
CMN_00278 CDS
T02530
Symbol
abfA1
Name
(GenBank) Cmm ortholog CMM_0310; Cms ortholog CMS_0881
KO
K01209
alpha-L-arabinofuranosidase [EC:
3.2.1.55
]
Organism
cmc
Clavibacter nebraskensis
Pathway
cmc00520
Amino sugar and nucleotide sugar metabolism
cmc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cmc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
CMN_00278 (abfA1)
Enzymes [BR:
cmc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.55 non-reducing end alpha-L-arabinofuranosidase
CMN_00278 (abfA1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-L-AF_C
Glyco_hydro_39
Motif
Other DBs
NCBI-ProteinID:
CCE74250
UniProt:
A0AAI8ZG08
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All DBs
Position
262071..263594
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AA seq
507 aa
AA seq
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MTDARPAADARIAIDRNSVVAPVNRRTFGSFVEHLGRCVYDGIYEPGHPTATADGFRGDV
VDLVKELGTSTIRYPGGNFVSGYRWEDGVGPRAERPKRLDLAWHSLETNEVGLDEFARWC
ELTGSELMMAVNLGTRGVLEALDILEYANHPGGTALSDQRIANGSPEPHGVKMWCLGNEM
DGPWQVGHMTADDYGKLANRTAGAMKMVDPTLELVACGSSGSGMPTFGEWERTVLEHAYD
NVDFISAHAYYQERKGDLGSFLASSLDMEYFIRTVVASADQVKYRRKSDKTINISFDEWN
VWYLDEHQESGVITEGWPYAPHLLEDVYSVADAVVLGNLMITLLKHSDRVTSASLAQLVN
VIAPIMTETGGGAWRQTTFFPFSVTSRLAQGEVLKPRIDVGTYETEVHGTAPLVDSVATF
DEATGRAAVFLVNRSLSDALTIEVDVAGLAVSEVLQAVGIHDDDVYAKNTFEDRERVGLT
ENASATLADGTLTITLPPVSWTAVSLG
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgcccgccccgcggccgacgcccgcatcgccatcgaccgcaactcggtcgtc
gcccccgtcaaccgccgcaccttcggctcgttcgtcgagcacctcggccgctgcgtctac
gacggcatctacgagcccggccaccccaccgcgaccgcggacggcttccgcggcgacgtc
gtcgacctcgtcaaggagctcggcaccagcaccatccgctaccccggcggcaacttcgtc
tccggctaccgctgggaggacggcgtcggcccgcgcgccgagcgcccgaagcgcctcgac
ctcgcctggcactcgctcgagaccaacgaggtcggcctcgacgagttcgcgcgctggtgc
gagctcaccggcagcgagctgatgatggccgtcaacctcggcacgcgcggcgttctcgag
gccctcgacatcctcgagtacgccaaccacccgggcggcacggccctctccgaccagcgc
atcgccaacggatcccccgagccccacggcgtgaagatgtggtgcctcggcaacgagatg
gacggcccgtggcaggtcggccacatgaccgccgacgactacggcaagctcgcgaaccgc
accgccggcgccatgaagatggtggatcccacgctcgagctcgtcgcgtgcggcagcagc
ggatccggcatgccgaccttcggcgagtgggagcgcaccgtgctcgagcacgcgtacgac
aacgtcgacttcatctcggcccacgcctactaccaggagcgcaagggcgacctcggcagc
ttcctcgcctcctcgctcgacatggagtacttcatccgcacggtcgtcgcgtcggccgac
caggtcaagtaccgccgcaagagcgacaagaccatcaacatctcgttcgacgagtggaac
gtctggtacctcgacgagcaccaggagtcgggcgtcatcacggagggctggccctacgcg
ccgcacctgctcgaggatgtctactcggtcgcggacgcggtcgtgctcggcaacctcatg
atcacgctgctcaagcacagcgaccgcgtcacctccgccagcctcgcgcagctcgtgaac
gtgatcgcgccgatcatgacggagaccggcggcggcgcctggcgccagacgaccttcttc
ccgttctcggtcaccagccgcctcgcgcagggcgaggtgctgaagccgcgcatcgacgtc
ggcacgtacgagaccgaggtgcacggcaccgcgccgctcgtcgactccgtcgcgaccttc
gacgaggccaccggccgcgccgcggtcttcctcgtgaaccgcagcctctcggacgcgctc
acgatcgaggtcgacgtcgccgggctcgccgtgtccgaggtgctccaggcggtcgggatc
cacgacgacgacgtctacgcgaagaacaccttcgaggaccgtgagcgcgtgggcctgacg
gagaacgcgtcggcgacgctcgccgacggcaccctcacgatcacgctgccgcccgtgtcg
tggacggccgtgtcgctcggctga
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