Clavibacter nebraskensis: CMN_00294
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Entry
CMN_00294 CDS
T02530
Name
(GenBank) putative ABC exporter (fused permease/ATPase)
KO
K14699
ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
Organism
cmc
Clavibacter nebraskensis
Pathway
cmc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cmc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CMN_00294
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cmc02000
]
CMN_00294
Transporters [BR:
cmc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CMN_00294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_16
ABC_membrane
AAA
AAA_22
AAA_21
Zeta_toxin
AAA_33
AAA_18
nSTAND3
TsaE
AAA_29
RsgA_GTPase
AAA_5
Cytidylate_kin
NB-ARC
AAA_19
NACHT
Motif
Other DBs
NCBI-ProteinID:
CCE74266
UniProt:
A0AAI8ZFY3
LinkDB
All DBs
Position
complement(280792..282531)
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AA seq
579 aa
AA seq
DB search
MRAMDDLRRTLGPDAERELRPVVIRMVAASVLHGAAALALVPVLERLFGADPSAAWPWIG
LFLVLAAAHLAVQAGAQSAAFGAGVRAANVLHHRIGDHVVRLPLAWFDSAHRAELTSAAG
SSVLASMGVPAYLLRPLITATVVPAVIAAGLLAIDPPLGIALLVLAPLVALALRWGGMVA
QGADAERAAADTEAGERIVEFAQAQHVLRAHGRTGRDAGLLDAILVRRRSAARALIGRTV
AGLVAFGAALRMALVVTLVVAVAPLLGPADAGRTIAVLVLVFHAADLVGQAAELAVGVRA
ARRDLRAVGRILDAAPIPERAPQETRRPDGSDVELDGVSFAYSGAPVDAVSDLRATLTAG
RMTALVGPSGSGKTTVARLVARAADVTGGAVRIGGVDVRDMALADVAAHVSTVFQDVHLL
AGTLGDNVRIADPDADDAAVTDALRRAGLPLGDGLDLDTPVGEGGRQLSGGQRQRVSIAR
VLLKDAPVVVLDEATAALDAESAAAVAEAIRLLRGRRTLLVIAHRLDTVRSADEILVLDG
GRLAQRGAHDELAGQPGVYAGFLADLVASDGWRVRAQYS
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcgatggacgacctgcggaggaccctcggcccggacgcggagcgcgagctccgc
cccgtggtgatccgcatggtcgccgcctccgtgctgcacggcgccgcggcgctcgcgctc
gtgccggtgctcgagcgcctcttcggcgcggatccgtcggccgcgtggccgtggataggc
ctgtttctggtgctcgccgccgctcatctggccgtgcaggccggcgcgcagtcagccgcg
ttcggcgctggcgtgcgggctgcgaacgtacttcaccaccgcatcggcgaccacgtcgtg
cgcctgccgctcgcgtggttcgactccgcgcatcgggcggagctcacgtccgcggcgggc
agcagcgtgctggcgtcgatgggggtgcccgcgtacctgctgcgcccgctcatcaccgcg
accgtcgttcccgccgtgatcgcggccgggctgctcgcgatcgacccgccgctcggcatc
gcgctgctggtgctggcgccgctcgtggccctcgcgctgcgctggggcggcatggtcgcg
cagggcgccgacgccgagcgcgccgcggcggacaccgaggcgggcgagcgcatcgtggag
ttcgcgcaggcgcagcacgtgctgcgggcgcacgggcgcaccgggcgcgacgcgggcctc
ctcgacgcgatcctcgtgcgccgccggtcggccgcgcgcgccctcatcggccgcaccgtg
gcgggcctcgtcgcgttcggggccgccctgcgcatggcgctcgtcgtgacgctcgtggtc
gcggtggctcccctcctcggccccgcggacgccggacgcaccatcgcggtgctcgtgctc
gtgttccacgcggcagacctcgtcgggcaggccgccgagctcgcggtcggggtacgtgcc
gcccgccgcgacctgcgtgccgtgggccggatcctcgacgccgcccccatccccgagcgc
gcaccccaggagacgcgccggcccgacggatccgacgtggagctcgacggggtctccttc
gcctactcgggcgcgccggtcgacgccgtgtccgatctccgcgccacgctgaccgcgggc
cgcatgaccgcgctcgtggggccatccggatccggcaagacgacggtcgcgcggctcgtc
gcccgcgccgccgacgtgaccggcggcgccgtgcgcatcggcggggtcgacgtccgcgac
atggcgctcgcggacgtggccgcgcacgtgtccaccgtcttccaggacgtgcacctgctc
gcgggcacgctcggcgacaacgtgcgcatcgcggatccggacgcggacgacgcggccgtc
acggacgcgctgcgccgtgccggccttccgctcggcgacgggctcgacctcgacacgccc
gtgggcgagggcggccgccagctctcgggcggccagcgccagcgcgtgtcgatcgcccgc
gtgctcctgaaggacgcgcccgtggtcgtgctcgacgaggccacggcggcgctcgacgcg
gagagcgccgcggccgtggccgaggcgatccggctcctgcgcgggcgccgcaccctgctc
gtgatcgcgcaccggctcgacaccgtgcggagcgccgacgagatcctcgtgctcgacggc
ggccgcctcgcgcagcgcggcgcgcacgacgagctcgccgggcagccgggcgtctacgcc
gggttcctcgccgacctcgtcgcgtcggacggctggcgggtgcgggcccagtactcgtag
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