Clavibacter nebraskensis: CMN_00302
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Entry
CMN_00302 CDS
T02530
Symbol
npsA
Name
(GenBank) non-ribosomal peptide synthetase
Organism
cmc
Clavibacter nebraskensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Condensation
PP-binding
AMP-binding_C
DUF913
Motif
Other DBs
NCBI-ProteinID:
CCE74274
UniProt:
A0AAI8ZG37
LinkDB
All DBs
Position
complement(295857..302702)
Genome browser
AA seq
2281 aa
AA seq
DB search
MTERIPSVPPAALLRDQVARALRLDPAEVGLDDDLVDLGLESTALIRLAGRWRRDGLAAD
FSRLAADPTIRAWTRVLGDAAADADPGTSTAAAPALDPASPSPLTPLQHAYWLGRQPGQP
SGSVAAHFYVELDGAERDPERLRTALAALVARHASLRMRFRDDGTQQPLPADEEPPAARL
RVHDLRALPADAVDARLAEMRDAGTHRRMAVERGEVLRVDLTLLPFGRCRLHVDLDMLAG
DAISLRVILADLRDLVDEPGRPLREIHRDVRGELAARAARAAASRSSSDARWWRERVPDL
PAGPALPVRDDAERAGTVPRSRRLHHRVGEEELRLLEAAARSRGLTVAAVLATAFAEVVA
AWSADGRFLLNLPVLDRSDEEGLELLVGEFSTSILLDVDLREERPFREDAARIQQGVREA
VAHAGYGGVDVLRDLARRDGGSPVLAPVVYTSAIGLGELYDASIRRALGEPVWIISQGPQ
VWLDAQVTELEGGLLLNWDVRVDILEEAAMEAAFLAYRRLVDELVHERPGAWDRPALAVP
APEDVRAHRALERPAPAADAPGAGDGLLHSAFLARAAADPDRPAVIASDDREVAYGELAD
HARRVAGLLGEHGVGPGATVAITAPAGTDRVAAVLGVLLAGACYAPVGPDQPPARRATVL
ERGIDCVLADDALVAESAAAVGPGGPPVVALGAARHAEPLAGPVAVAPDEPAYLLFTSGS
TGRPKGVEVAHRAAAATILSLAVVAPLGPDDRTIALSALDFDLSVYDLFAVLSVGGAVVV
PAEHERRDADRWRELVRAHGVTVWNTVPALLDMLLAATGDGSLPLRLVLLGGDVVGVDLP
GRLAACAPAARLLALGGMTEATIHSTVHEARADAPVSPASAARGLPWGAPLPGVRLRVVD
ERGRDRPDGVPGELLVGGHALARGYRGEPGLTAARFPVRGGERWYRSGDRGRYRRDDAGR
PVLEFLGRADHQLKIRGHRVEPGEVEAALASFPGVQRAVVVAVAGALAAMVVPEPGAVVV
PDDVATHAGALLPPSMACARVVVRAELPLTANGKVDRARIIAALAERPAPAPRPDDASMS
PEERLVERVWSGLLGTPCGRGRSFFAAGGDSLQATRSIAALRAAGAADASVAALFRHPVL
ADFAATLHLTAPEPADARSRIVPDPEHRHDPFPLTDVQRAYAVGRDPRIPLGGVGTYHHT
EFDGQGQDLDLLAAAFDELVRRHPTLRTVIDPDGTQRVLEEVPAVRVDARDVPADADPDA
VDAALQAFRARTSHRCHDLAVWPLFDVDALRYPDGRGGIRTRIAIGIDYAVVDALSIMIL
YTELDLLVRGLPLPPAPAELTFRDCVLQTRPDPERRRADEEHWRARLADMPDAPRLPLAD
RDPAPRFTRRAHRFDAAWWAAFRDRCRTAGLTPTSMLATAYGHVLSRWSGQRDLTMTLTL
FDRRDVHPDMPRLVGDFTALTLLDHRAAGSAVEAARGLQERLAADLDHREAPASWILRER
ARLAGTAVAPVPVVFTSAIGVGDGVGVGDGVGVGDGVGVGVGDGVSADVSGAFGERIHGV
SQSPQVLLDVQVLEDHGGLRVDADARDDAFPPGLVDALFAAYVATLEHLAASGWDAPLPV
DPPADQARARATATAAPRPGRLLHDAVREAALRAPEAPALITGTGASTRVVTHGQLADRA
LRIAGALQRRGIGPGDLVGVTLPRGADQAAAVLGVLSAGAAYAPIGVGQPPARRRAIHRA
GGIRLVIADDPAAAGGDEPDAPALLRPADAAAEEPLAAPVRPSVEALAYVIHTSGSTGEP
KGVEIAHDAAWSTVEAVGRMLDLGPGDRILALSALDFDLSVFDVLGVLGAGGALVIPEEG
EERDAPRWLDLVHEHGVTLWDTVPMLLDMLLVAADDRPGRLGALRAALVSGDRVGTDLHG
RLIRAAGPGTRLVALGGATEAAIWSNAWEVDGPLEGWGSAPYGRPLPDQAFRVLDACGRD
CPDWVPGEFVIGGRGLARGYRGDPARTAAAFVELDGGRWYRTGDTGRYRPGGILEFLGRA
DRQVKLGGHRMELGEIEAALAASPGVRRAIALVVDGPAGRRRLHAAVEPDDGHDGAAVLS
AATATAADRLPSYAMPQRIHLVDAWPLTANGKVDVPALARALAEADALTHAGADPTRCAD
ADAAHGPARPAAPATATEAALTELWAGVLGTPPAPGVGFFAAGGDSLAMLRLVTAAQRRF
GVDAGVRRFLEEPTVPAYAACIDRARLAAATPSTPASASPADAPARPPATAGADLFESGD
L
NT seq
6846 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagcggatcccctccgtccctcccgccgcgctgctccgcgaccaggtcgcgcgc
gccctgcgcctcgaccccgccgaggtgggcctcgacgacgacctggtggacctcgggctc
gagtccaccgcgctgatccgcctcgccgggcgctggcgacgcgacgggctcgcggccgac
ttctcgcggctcgcggccgaccccacgatccgggcgtggacgcgagtgctgggcgatgcc
gccgcggacgcggatcccggcacgagcacggccgccgctcccgccctcgaccccgcgtcg
ccgtcgcccctcacgccgctgcagcacgcgtactggctcggccggcagcccggccagccg
tccgggtcggtcgccgcgcacttctacgtcgagctcgacggggcggagcgggaccccgag
cggctgcgcacggccctcgccgccctggtcgcccggcacgcgtcgctcaggatgcgcttc
cgggacgacggcacgcagcagcccctgcccgccgacgaggagccgcccgccgcccggctg
cgcgtccacgacctccgcgcgctgcccgccgacgccgtggacgcgcgcctggcggagatg
cgcgacgcgggcacgcaccgccgcatggccgtcgagcgcggcgaggtgctccgcgtcgac
ctgacgctcctgccgttcggccgctgccgcctgcacgtcgacctcgacatgctcgcgggc
gacgccatcagcctccgcgtgatcctcgccgacctccgcgacctcgtggacgagccgggg
cggccgctgcgcgagatccaccgcgacgtgcgcggcgagctggcggcccgggccgcgcgc
gccgcggcgtcccgctcctcgtccgacgcgcgctggtggcgcgagcgcgtgcccgacctc
ccggcgggacccgcgctgcccgtgcgcgacgacgccgagcgggcggggaccgtgccgcgc
tcccgccggctgcaccaccgtgtaggagaggaggagctccgcctgcttgaggccgcggcg
cgctcccgcgggctgacggtggccgccgtgctcgcgacggcgttcgccgaggtcgtggcc
gcctggtcggccgacggccgcttcctcctcaacctccccgtgctcgaccgcagcgacgag
gaggggctggagctgctcgtcggcgagttcagcacctcgatcctgctcgacgtcgacctg
cgggaggagcggccgttccgggaggacgcggcgcggatccagcagggcgtgcgcgaggcc
gtcgcccacgcgggctacggcggcgtcgacgtgctccgcgacctcgcgcgccgcgacggc
ggcagccccgtgctggcgcccgtcgtgtacacgagcgccatcggcctgggcgagctgtac
gacgcgtccatccgtcgcgcgctcggggagccggtgtggatcatctcccagggtccgcag
gtctggctcgacgcgcaggtcaccgagctcgagggcgggctgctgctcaactgggacgtg
cgggtcgacatcctcgaggaggcggcgatggaggccgcgttcctcgcgtaccgccgcctc
gtcgacgagctggtgcacgagcggcccggcgcctgggaccggccggcgctcgcggtcccc
gccccggaggacgtgcgggcgcaccgggccctcgagcggccggccccggctgcggacgcg
cccggcgcgggcgacggcctcctgcactcggcgttcctcgcgcgggcggccgcggatccg
gaccggccggcggtcatcgcgtcggacgaccgagaggtcgcgtacggtgagctcgccgac
cacgcgcgccgggtcgccgggctgctgggcgagcacggcgtcggccccggcgcgacagtg
gcgatcaccgcgccggccgggacggatcgcgtggccgccgtgctcggagtgctgctcgcc
ggcgcctgctacgcgcccgtcggcccggaccagccgcccgcgcgccgcgcgacggtcctc
gagcgggggatcgactgcgtcctcgccgacgacgcgctggtcgccgaatccgcggcggcc
gtcggtccgggcggcccgcccgtggtcgcgctgggcgccgcccggcacgccgagccgctc
gcgggtcccgtcgccgtcgcccccgacgagcccgcctacctgctcttcacgtccggatcc
accggccggccgaagggcgtggaggtcgcccaccgggccgctgccgccaccatcctgtcc
ctcgcggtcgtcgcgcccctcggcccggacgaccgcaccatcgcgctctccgcgctcgac
ttcgacctctccgtctacgacctgttcgcggtgctctcggtgggcggcgcggtcgtcgtg
cccgccgagcacgagcgccgcgacgccgaccggtggcgggagctcgtccgcgcgcacggc
gtcacggtctggaacaccgtgccggcgctcctcgacatgctgctcgcggcgaccggcgac
ggatccctgccgctccggctcgtgctgctcggcggcgacgtggtcggggtggatctgccg
gggcgcctggccgcctgcgcgcccgccgcccggctgctcgcgctcggcgggatgacggag
gcgaccatccactccaccgtgcacgaggcgcgcgccgacgcccccgtgtcccccgcgtcc
gccgcgcgcggcctcccctggggcgccccgttgccgggcgtgcgcctccgggtcgtcgac
gagcgcggacgcgaccgccccgacggcgtgcccggcgagctgctcgtgggcgggcacgcg
ctggcccgcggctaccgcggcgagcccggtctcaccgcggcccgcttcccggtgcgcggc
ggcgagcgctggtaccgctcgggcgaccgcggcaggtaccggcgcgacgacgcggggcgg
ccggtgctcgagttcctcgggcgcgcggatcaccagctcaagatccgcggccaccgcgtc
gaacccggggaggtcgaggccgcgctggcctccttcccgggcgtgcagcgcgcggtcgtc
gtcgccgtcgcgggcgcgctcgcggcgatggtggtgcccgagcccggcgcggtcgtcgtg
cccgacgacgtcgcgacccacgcgggcgcgctgctgccgccgtccatggcgtgcgcgcgc
gtggtcgtgcgggccgagctgccgctcacggccaacgggaaggtcgaccgggcccggatc
atcgccgcgctcgccgagcgcccggcccccgcgccgcggccggacgacgcctcgatgtcg
cccgaggagcggctcgtggagcgggtgtggagcggcctgctcggcaccccgtgcggtcgc
gggcgctccttcttcgccgcgggcggcgactccctgcaggccacccgcagcatcgccgcc
ctgcgcgccgcgggcgccgccgacgcgagcgtggccgcgctcttccggcacccggtgctg
gccgacttcgcggcgacgctgcacctcacggcaccggagccggcggacgcgcgctcccgc
atcgtgccggaccccgagcaccggcacgaccccttcccgctcaccgacgtgcagcgcgcg
tacgcggtcggccgcgacccccgcatcccgctcggcggcgtcggcacctaccaccacacc
gagttcgacggccaggggcaggacctcgacctgctcgcggccgcgttcgacgagctcgtg
cgccggcacccgacgctgcgcaccgtgatcgaccccgacggcacccagcgcgtgctggag
gaggtgcctgccgtgcgcgtcgacgcgcgcgacgtgccggccgacgcggatccggacgcg
gtggacgcggcgctccaggcgttccgcgcgcgcacctcgcaccggtgccacgacctcgcc
gtctggccgctcttcgacgtcgacgcgctgcgctaccccgacggccgcggtgggatccgc
acgcgcatcgccatcggcatcgactacgccgtcgtcgacgcgctctcgatcatgatcctg
tacaccgagctcgacctcctcgtgcgcggcctgccgctcccgcccgcgcccgccgagctg
acgttccgggactgcgtgctgcagacccggccggacccggagcggcggcgcgccgacgag
gagcactggcgcgcgcggctcgccgacatgcccgacgccccgcggctgccgctcgcggac
agggatccggccccccgcttcacgcgccgcgcacaccgcttcgacgcggcgtggtgggcc
gcgttccgcgaccgctgccggacggccgggctcacgcccacgagcatgctggcgaccgcg
tacggccacgtgctctcccgctggagcgggcagcgcgacctcaccatgacgctgaccctc
ttcgaccggcgcgacgtgcatcccgacatgccgcgcctcgtgggcgacttcaccgccctg
accctcctcgaccaccgggccgcgggctcggcggtcgaggcggcgcgcgggctgcaggag
cgcctcgccgccgacctcgaccaccgcgaggcgcccgcgtcgtggatcctgcgggagcgc
gcgcgcctcgcgggcacggccgtcgcgccggtgcccgtcgtgttcacgagcgcgatcggc
gtcggcgacggggtcggcgtcggcgacggggtcggcgtcggcgacggggtcggcgtcggc
gtcggcgacggggtctcagccgacgtgtcgggggcgttcggcgagcggatccacggcgtg
tcccagtcgccccaggtgctcctcgacgtccaggtgctggaggaccacggcggcctgcgg
gtcgacgcggacgcgcgcgacgacgcgttcccgccgggcctcgtcgacgcgctgttcgcc
gcgtacgtggccacgctcgagcacctcgccgcgtccggctgggacgcgccgctccccgtg
gatcccccggccgaccaggcgcgcgcccgcgccacggcgaccgcggccccgcgaccgggc
cgcctcctgcacgacgccgtgcgggaggccgcgctccgggcgcccgaggcacccgcgctc
atcacgggcacgggcgcgtcgacgcgcgtcgtgacgcacggccagctcgccgaccgcgcc
ctgcggatcgccggcgcgctccagcgtcgcggcatcggcccgggcgacctcgtcggcgtc
acgctgccgcgcggcgcggaccaggcggccgcggtcctcggcgtcctcagcgcgggtgcc
gcgtacgcgcccatcggcgtcggacagcctcccgcgcggcggcgggcgatccaccgcgcg
ggcggcatccgcctggtcatcgccgacgatccggccgcggcgggcggcgacgagcccgac
gcgcccgccctcctccgcccggccgacgccgccgcggaggagccgctcgccgccccggta
cgcccgtccgtcgaggcgctcgcctacgtcatccacacctccggctccacgggcgagccc
aagggggtggagatcgcgcacgacgccgcgtggtccacggtcgaggcggtgggccggatg
ctcgacctcggccccggcgaccggatcctcgcgctctccgcgctcgacttcgacctctcc
gtgttcgacgtgctcggcgtgctgggcgcgggcggcgcgctcgtgatccccgaggagggc
gaggagcgcgacgccccgcgctggctcgacctcgtgcacgagcacggggtcacgctgtgg
gacacggtgccgatgctgctcgacatgctcctcgtcgcggccgacgaccggccggggagg
ctcggcgcgctgcgggcggcgctggtctccggcgaccgcgtgggcaccgacctgcacggg
cgcctgatccgggcggccgggccgggcacgcggctcgtcgcgctgggcggcgcgaccgag
gcggccatctggtcgaacgcgtgggaggtggacggcccgctggagggctggggatccgcg
ccctacggccgaccgctgcccgaccaggcgttccgggtgctcgacgcgtgcggccgggac
tgccccgactgggtgccgggcgaattcgtcatcggcggccgcggcctcgcccgcggctac
cggggcgaccccgcgcgcacggcggccgcgttcgtcgagctcgacggcggccgctggtac
cgcacgggcgacacgggcaggtaccggccgggcgggatcctcgagttcctcggtcgcgcg
gaccggcaggtgaagctcggcgggcaccggatggagctcggcgagatcgaggccgccctc
gcggcatctcccggggtgcggcgcgcgatcgcgctcgtggtcgacgggccggcgggacgg
cggcgcctgcacgcggccgtcgagccggacgacgggcacgacggggccgcggtgctgtcc
gcggcgaccgcgacggccgccgaccggctcccctcgtacgcgatgccgcaaaggatccac
ctcgtcgacgcgtggccgctgaccgcgaacggcaaggtggacgtgccggcgctcgcccgc
gcgctcgcggaggcggacgcgctcacccacgccggcgcggacccgacgcggtgcgccgac
gccgacgccgctcacggccccgcgcgccccgccgcgcccgcgaccgcgacggaggccgcc
ctcaccgagctgtgggccggggtcctcggcaccccgccggccccgggcgtcggcttcttc
gcggcgggcggcgacagcctcgccatgctccggctcgtgaccgccgcccagcgccgcttc
ggcgtcgacgcgggcgtccgccgcttcctcgaggagccgaccgtgccggcgtacgccgcc
tgcatcgaccgcgcgcgcctcgcggccgccaccccgtccacccccgcgtccgcgtccccc
gcggacgcccccgcccgaccgccggccaccgccggcgccgacctcttcgaaagcggagac
ctgtga
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