Clavibacter nebraskensis: CMN_00389
Help
Entry
CMN_00389 CDS
T02530
Name
(GenBank) conserved secreted protein
Organism
cmc
Clavibacter nebraskensis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SCAB-Ig
NOMO1-like_2nd
CarboxypepD_reg
SdrD_B
Ig_DR_A0283-like
Motif
Other DBs
NCBI-ProteinID:
CCE74358
UniProt:
A0AAI8ZG92
LinkDB
All DBs
Position
complement(389137..392244)
Genome browser
AA seq
1035 aa
AA seq
DB search
MTTARRRALVGLISLALVASAQAGMATSAIAADAPVGTAAVGTTAVTFTTAPQPSITGTA
QVGSTLFAVTGTWAPQPDSFTFKWWSNGLAISGATGSAYTLVAADLGKKITLTVTANKAG
YTSLAKSSAATATVAAAPSPVAFTTVPTPTISGTPKVGTPLTAATGTWAPVPTTFAYRWF
VANVAVTGATASTYTPVAADVGKRITVTVTGSRSGYTTAAKTSAASAAVAAAPVTTPATF
TTVPTPTLTGSAQVGGTLTAVPGTWAPVPTTFTYRWFAANVAISGATASTYSPVAADLGK
RITVTVTGARSGYTTASKTSAVSAAVVTAPVTSPSTFTTVPTPTLSGTAQVGATLTAAPG
TWVPVPTTFTYRWFASNVAISGATASTYVPVAADVGKRITVTVTGARSGYTSASKTSAGS
AAVVAAPAAKAFAIASSPTISGSASVGGVLTAATGSWSPAPAFTYQWTVGTTAITGATGS
TYTVGTADLGKTITVTITAKATGYITTSKTSVATAAVGKPAIASTQPVIVGDARVGYPLR
VVPGIWNPKPSFTFVWYANDVKIDGANAQDYTPGSADIGKRITATVTGTAPSYSAVARTS
GRTAAVVGMDTQPPEQPWNGKVVGNVYLDFVDPQNLVTEGNIDLVNPEYGWADYSAAIGN
GAYSMSDIRPREYGLRVEVEVAGEYIIQYFGQTNDLKSAQTFAVQSNGTMTIDVVVKRYA
SVSGTVSATDELTGDVPVSIFRTDGDGAEVGATRTDWGGRFTVRDIVPGTYKVRFGSPTP
NDGAVVGEWFGDSDTRASGKTVTVSQWGQAVIGVNAVLTPGTRLAGQITSPTGSLGGAQV
SLVPQDDLEGLTTMNVTADAGGYYAFPAIAPGKYKVLVSSSRSSAPVYETRWAGGTGSLE
TSTTYTAARGTPMPRVDVQLAVSPSVTVQVTGLAAAGWDPDRALVSLYQDGVRKFYSWAW
NGDPAFLRDLTPGTYNVAITYYDADYNADYNAKAYWWNGGVYADKSEIVVRAGDSISIVA
KAVTRVAPAGAQLVR
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccgcacgccgacgcgccctcgtcggcctcatctcgctggccctcgtggcctcc
gctcaggcgggcatggcgaccagcgccatcgccgccgacgcgcccgtcggcaccgcagcc
gtcggtaccaccgccgtcaccttcaccaccgcgccccagccgtccatcaccggcaccgcg
caggtcggttccaccctcttcgccgtgaccggcacctgggcgccgcagcccgactcgttc
acgttcaagtggtggagcaacgggctcgcgatctccggcgccaccgggtccgcgtacacg
ctcgtcgccgcggacctgggcaagaagatcacgctgaccgtgaccgcgaacaaggccggc
tacacgtcgctcgccaagtcgagcgccgcgaccgcgaccgtcgcggccgcgccctccccc
gtcgccttcacgacggtgccgacaccgacgatcagcgggaccccgaaggtcggcaccccg
ctcaccgcggccaccggcacgtgggcaccggtgccgacgaccttcgcgtaccgctggttc
gtggcgaacgtggccgtcaccggcgcgaccgcgtccacctacacgccggtcgccgccgac
gtcggcaagcgcatcaccgtcaccgtgaccggcagccgctcgggctacacgaccgccgcg
aagaccagcgcggcgagcgccgccgtcgcggccgcgcccgtcaccacgcccgcgacgttc
accaccgtcccgacgccgaccctcaccggatccgcgcaggtcggcgggacgctcaccgcc
gtccccggcacgtgggcacccgtcccgacgacgttcacgtaccgctggttcgccgcgaac
gtggccatcagcggcgcgaccgcctcgacctactcgcccgtcgccgcggacctcggcaag
cggatcaccgtcaccgtcaccggcgcgcggagcgggtacacgaccgcctcgaagaccagc
gcggtcagcgccgccgtggtcaccgcgcccgtcacctcgccgtcgacgttcaccaccgtg
ccgacgcccaccctcagcggcaccgcccaggtcggcgcgaccctgaccgcggcgcccggc
acctgggtacccgtcccgacgacgttcacgtaccgctggttcgcgtcgaacgtggccatc
tcgggcgcgaccgcctccacctacgtccccgtcgcagcggacgtcggaaagcgcatcacc
gtcaccgtgacgggggcgcgctcgggctacacgtcggcctcgaagacgagcgccggctcg
gccgcggtcgtcgccgcacccgccgcgaaggcgttcgcgatcgcgtcatcgcccaccatc
agcgggtccgcctcggtcggcggcgtcctcaccgcggcgaccggatcctggtcccccgcc
ccggcgttcacgtaccagtggaccgtgggcaccaccgcgatcaccggcgccaccgggtcg
acctacacggtcggcacggcggacctcggcaagacgatcacggtgacgatcacggcgaag
gccacgggctacatcacgacgagcaagacgagcgtcgcgacggccgcggtcggcaagccg
gcgatcgcgtcgacgcagccggtgatcgtgggcgatgcacgagttggatatcccctccgc
gtggttccgggcatctggaatccgaagccgtcctttacgttcgtctggtacgcgaatgac
gtgaaaatcgacggggccaatgcgcaggattacacgcccggctcggccgatatcggaaaa
cgcataactgcgactgtgacggggaccgcacctagttactcggccgtcgcacgtacgagc
ggacgcacggcagccgtcgtcgggatggacacacagcctcccgagcagccctggaacgga
aaagtcgtcggcaacgtctacctcgacttcgtggatccgcagaacctggtcacagaaggc
aacatcgatctggtcaaccccgaatacggctgggccgactactcggctgctatcgggaac
ggcgcttactccatgtcggacatccggccccgcgagtatgggctgcgtgtcgaggtcgag
gtcgccggggagtacatcatccagtacttcggacagaccaacgacctcaagtcagcccag
accttcgctgtgcagtcgaatggcacgatgaccattgacgtggtcgtcaagcgatacgcc
tcggtgagcggaaccgtctcggctactgacgagttgacgggcgacgtcccggtctcgatc
ttcaggactgatggcgacggcgccgaagtcggcgcgacccggacagactggggtggaagg
ttcaccgtgcgggacatcgtccctggtacatacaaggtgcgcttcggctctcccacgcct
aatgacggcgccgtggtcggcgagtggttcggggactcggacacccgggcgtccggaaag
acggtcacagtatctcaatggggccaagccgtcatcggcgtcaatgcggtgctgacaccc
ggcactcgtctcgcaggacagataacgtcgccgacgggttcccttggtggtgctcaagtc
tcattagtcccccaagacgacctggagggtctgacgaccatgaacgtcaccgcagatgcc
ggcggttactacgccttccctgcgatagctcctgggaagtacaaggtacttgtgagcagc
agccggtcgtcagcgccagtctacgagacacggtgggccggcgggacggggtccttggag
acatcgacgacctacaccgccgctcgcggaacgcccatgccgcgggtagacgtgcagttg
gcggtcagcccgtccgtaacggtgcaagtgacgggtctcgcggcggcagggtgggacccg
gacagagcgctggtgtccctgtatcaggacggtgtccggaagttctacagctgggcatgg
aacggtgatcccgccttcctccgcgatctgacgccgggcacctacaacgtcgcgattacg
tactacgacgccgactacaacgccgactacaacgccaaggcgtactggtggaacggcggc
gtctacgccgacaagtccgagatcgtcgtgcgcgccggggactcgatctccatcgtcgcg
aaggcggtcacgcgggtcgctccggcaggggcgcagctcgtccgctga
DBGET
integrated database retrieval system
