KEGG   Clavibacter nebraskensis: CMN_00530
Entry
CMN_00530         CDS       T02530                                 
Symbol
sigB
Name
(GenBank) RNA polymerase sigma 70 factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
cmc  Clavibacter nebraskensis
Pathway
cmc02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:cmc00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    CMN_00530 (sigB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cmc03021]
    CMN_00530 (sigB)
Transcription machinery [BR:cmc03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CMN_00530 (sigB)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r3 Sigma70_r4 Sigma70_r1_2 KORA HNH_repeat
Other DBs
NCBI-ProteinID: CCE74494
UniProt: A0AAI8ZGH8
LinkDB
Position
complement(518796..519839)
AA seq 347 aa
MTMTPTRPTAAETTSDTELDQVESVRPVDPYADSDLPEPSLVTPGASTDAVKDYLRQIGR
VPLLTAEQEVTVARRIEVGVLSQEVLDTRTDLTSAERREYQTLAQDGMRAKQHLVNANLR
LVVSIAKRYTGRGLPFLDLIQEGNMGLVRAVEKFDYQAGFKFSTYASWWIKQSITRGMAD
TSRTIRIPVHTVEHINRINAVQRELAVELGRDPSMEEIARESDTPVTKVRYLLDRAQEPM
SLQVLVGGSGGDGDTEMADLIEDADVTQPIDVVTQQLMAAHVMRLIDGLAERDAEVVRMR
FGLAGLEPRSLAFVSQQLGVTRERVRQIEKKVLAKLRIPELETYIRG
NT seq 1044 nt   +upstreamnt  +downstreamnt
atgacgatgacaccgacccggcccacggccgccgagaccacctccgacaccgagctcgac
caggtcgagtccgtccgtcccgtcgatccgtacgcggactccgacctccccgagccgtcg
ctcgtcacccccggcgccagcaccgacgccgtcaaggactacctccgccagatcggccgc
gtgccgctgctcaccgccgagcaggaggtgaccgtggcccgccgcatcgaggtgggcgtg
ctgtcgcaggaggtcctcgacacccgcaccgacctcacctcggccgagcgccgcgagtac
cagacgctggcgcaggacgggatgcgcgccaagcagcacctcgtgaacgcgaacctgcgc
ctcgtcgtcagcatcgccaagcgctacacgggccgcggcctgccgttcctggacctcatc
caggagggcaacatgggactcgtccgcgccgtcgagaagttcgactaccaggccggcttc
aagttctcgacctacgcgtcgtggtggatcaagcagtccatcacccgcggcatggccgac
acgagccgcaccatccggatccccgtgcacacggtcgagcacatcaaccgcatcaacgcg
gtgcagcgcgagctcgccgtcgagctcggccgcgacccctccatggaggagatcgcacgc
gagtcggacacgcccgtcaccaaggtgcgctacctgctcgaccgcgcacaggagcccatg
tcgttgcaggtcctggtgggcggcagcggcggcgacggcgacaccgagatggccgacctc
atcgaggacgcggacgtcacgcagcccatcgacgtggtgacgcagcagctcatggccgcg
cacgtcatgcgcctcatcgacgggctggccgagcgcgacgccgaggtcgtgcggatgcgc
ttcggcctcgcgggcctcgagccgcgttcgctcgccttcgtgagccagcagctcggcgtg
acgcgcgagcgcgtgcgccagatcgagaagaaggtgctcgccaagctccgcatcccggag
ctggagacctacatccgcggctga

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