Clavibacter nebraskensis: CMN_00724
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Entry
CMN_00724 CDS
T02530
Name
(GenBank) integral membrane efflux transporter, RND family
KO
K03296
hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
Organism
cmc
Clavibacter nebraskensis
Brite
KEGG Orthology (KO) [BR:
cmc00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99977 Transport
CMN_00724
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
MLIP
Motif
Other DBs
NCBI-ProteinID:
CCE74682
UniProt:
A0AAI8ZGU8
LinkDB
All DBs
Position
707209..710466
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AA seq
1085 aa
AA seq
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MHLLSVFSLRNRALIALITIVIGVFGGIALTTLKQELIPSVTFPQLAVVTAYPGASPAVV
DSDVSTPIERAIQAVPGLESSTATSRTDSSVISASFTYGTDLATAEQKIDQAINRIRTTL
PDGIDPVVIAGSIDDLPVIQIAVTSDLSPQDLTAALERSTLADIRKLEGVRDASLLGTVG
QRVVITPDPAKVQAEGLTNQAIRDALDANGSLLPAGSVTEDGTTLSVQSGTRLGSTQDLA
SLPLLGAAGGRAVTIGDVATVELGQDPTTGISRVDGQPSLTIAVTKTPAGNTVDVSHLVT
QLLPQLSDDLGSNTKFTVVFDQAPFIEQSISSLTTEGLLGLVFAVLVILVFLMSIRSTIV
TAISIPASVLITFIGMLASGYTLNIITLGALTIAVGRVVDDSIVVIENIKRHLSFTPDRL
EAIRAAVREVAGAVTASTATTVAVFLPIALVGDITGELFRPFALTVTIALAASLFVALTI
VPVLAYWFLRPEGESRRARKKAAAAETTRTGAHAAVRGSVDDRARSGRRARGSHAGDGQG
EGQSGSEGIGAPTRLQRGYRPILAWTLKHSAVTLVLAILVLGGTVALIPSMKTNFLGDSG
QNTLTVSQELPSDTSLEAQDTAATKVEQALIGVAGVETVQTSIGADSTSLTSAFGGGGGI
TFALTTDPDADQDAIREGVRSAVDGLTDVGDVSLAAASGGFSSSDIEVQITANDADDLKT
SADAILAAVKDVPSIEQATSNLSETQPYIAVTVDRAKAAAAGLSEQAVGGIVTASRLPAA
VGQVVIDEKTLSIYIQDPDAAQSLQGLRDFRIPTARGLVPLSDLATVEVTDGPATVTTTG
GFRSATVSATPGSDDVGFASSEVSQAVADVQLPAGAQASLGGVASQQSNAFGQLGLAVLA
AILIVYIIMVATFRSLIQPLVLLVSVPFAATGAVLLQVVTGIPLGVASIIGLLMLVGIVV
TNAIVLIDLVNQYRTRGMGLREAILQGAGRRLRPILMTALATIFALLPLAIGLTGHGGFI
SQPLAIVVIGGLLSSTVLTLLVLPSLYSLVERAALRIRARGERRRAERGLPAGGSATTTE
AGTAG
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
ctgcatctcctctccgtcttcagcctccgcaaccgtgccctgatcgcgctcatcacgatc
gtcatcggggtgttcggcggcatcgcgctgacgacgctcaagcaggagctcatcccgtcg
gtgacgttcccgcagctcgcggtcgtcacggcgtacccgggcgcctcgcctgcggtcgtc
gactccgacgtgtcgacgcccatcgagcgcgcgatccaggcggtgccgggcctcgagtcc
tccacggcgacctcgcgcaccgactcgtccgtcatctcggcgtcgttcacgtacggcacc
gacctcgcgacggccgagcagaagatcgaccaggccatcaaccggatccgcacgacgctg
cccgacggcatcgaccccgtcgtcatcgcgggcagcatcgacgacctgcccgtgatccag
atcgccgtcacgagcgacctcagcccgcaggacctcacggccgcgctcgagcgctcgacc
ctcgccgacatccgcaagctcgagggcgtgcgcgacgcgagcctgctcggcacggtcggg
cagcgcgtggtcatcacgccggaccccgcgaaggtgcaggcggagggcctcacgaaccag
gcgatccgcgacgcgctcgacgcgaacggctcgctgctgcccgcgggatccgtgacggag
gacggcaccacgctgtcggtgcagtcgggcacgcgcctcggctccacccaggacctcgcg
tcgctgccgctgctcggcgccgcgggcgggcgcgcggtcacgatcggcgacgtcgccacc
gtggagctcggacaggatccgaccaccggcatctcgcgcgtcgacggccagccgtcgctc
accatcgccgtgaccaagacgcccgcgggcaacacggtcgacgtctcgcacctcgtcacc
cagctcctgccgcagctctccgacgacctgggcagcaacaccaagttcacggtcgtgttc
gaccaggcgcccttcatcgagcagtccatctcgagcctcaccaccgagggcctgctcggc
ctcgtgttcgcggtgctcgtgatcctcgtgttcctgatgtcgatccggtccacgatcgtg
acggcgatctccatcccggcgtccgtgctcatcaccttcatcggcatgctcgcctccggc
tacacgctcaacatcatcacgctcggcgcgctcacgatcgcggtcgggcgcgtggtggac
gactccatcgtcgtcatcgagaacatcaagcggcacctctccttcacgcccgaccggctc
gaggcgatccgcgcggccgtgcgcgaggtcgcgggcgccgtcacggcgtcgaccgccacg
accgtcgcggtgttcctgccgatcgcgctcgtgggcgacatcacgggggagctgttccgg
cccttcgcgctcaccgtgaccatcgcgctcgccgcgtcgctgttcgtcgcgctgacgatc
gtgccggtgctcgcgtactggttcctgcggcccgagggggagtcgcgtcgggcgcggaag
aaggcggcggcggcggagaccacgcggacgggcgcgcatgccgccgtccgcgggtccgtc
gacgatcgcgcacgctcgggtcggcgagcccgcggatcgcacgccggggacggccagggg
gagggtcagagcgggagcgagggcatcggcgccccgacgcgcctccagcgcggctaccgg
ccgatcctcgcgtggacgctgaagcactcggccgtcacgctggtcctcgcgatcctcgtg
ctcggcggcaccgtggccctcatcccgagcatgaagaccaacttcctcggcgacagcggg
cagaacacgctcacggtctcgcaggagctgccgagcgacacgagcctcgaggcgcaggac
accgcggccacgaaggtcgagcaggcgctcatcggcgtcgcgggcgtcgagaccgtgcag
acctcgatcggcgcggacagcacgtcgctcacgtcggccttcgggggcggcggcgggatc
acgttcgcgctcaccaccgatccggacgccgaccaggacgccatccgcgagggcgtgcgc
tccgcggtggacggcctcaccgacgtgggcgacgtgtcgctcgcggcggcgtcgggcggg
ttctcctcgagcgacatcgaggtgcagatcaccgcgaacgacgccgacgacctgaagacc
tcggccgacgcgatcctcgcggccgtgaaggacgtcccgtccatcgagcaggccacgagc
aacctgtccgagacgcagccgtacatcgccgtgacggtcgaccgggcgaaggccgcggcg
gccgggctcagcgagcaggccgtgggcggcatcgtcactgcgagccggctgccggccgcg
gtcgggcaggtcgtgatcgacgagaagacgctgtccatctacatccaggacccggacgcc
gcgcagagcctgcaggggctgcgcgacttccggatccccaccgcgcgcggcctcgtgccg
ctcagcgatctcgcgaccgtggaggtgaccgacggcccggcgaccgtgacgaccacgggc
ggcttccgcagcgcgaccgtgagcgcgacgccgggcagcgacgacgtgggcttcgcctcg
tccgaggtgtcgcaggccgtcgcggacgtgcagctgccggccggcgcgcaggcgtcgctc
ggcggcgtcgcgtcgcagcagtcgaacgcgttcgggcagctggggctcgcggtgctggcg
gcgatcctgatcgtctacatcatcatggtggcgacgttccggagcctcatccagccgctc
gtgctgctcgtctcggtgccgttcgcggcgaccggcgcggtgctgctgcaggtcgtgacg
gggatcccgctgggcgtggcgtcgatcatcggcctgctgatgctcgtgggcatcgtggtg
accaatgccatcgtgctcatcgacctcgtgaaccagtaccggacgcgcggcatgggcctg
cgcgaggcgatcctgcagggcgccgggcgacggctccggcccatcctcatgacggcgctc
gcgacgatcttcgcgctgctgccgctcgcgatcgggctcaccggccacggcggcttcatc
tcgcagcccctcgcgatcgtggtgatcggcggcctgctgtcgtccaccgtgctgaccctg
ctcgtgctgccgtcgctgtactcgctcgtggagcgcgcggcgctgcggatccgggccagg
ggcgagcggaggcgggccgagcgcgggctgcctgcgggcggatccgcgacgacgaccgag
gccggcaccgcgggctga
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