Clavibacter nebraskensis: CMN_00859
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Entry
CMN_00859 CDS
T02530
Name
(GenBank) cell surface protein
Organism
cmc
Clavibacter nebraskensis
Pathway
cmc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cmc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CMN_00859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpaA
Motif
Other DBs
NCBI-ProteinID:
CCE74815
UniProt:
A0AAI9EJT4
LinkDB
All DBs
Position
868247..872560
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AA seq
1437 aa
AA seq
DB search
MALHMPSRRSRLATATAFGLAAAIVAFGGTAPANAAPGDTAEAEGRFLTLTNVPQVIALD
GAYASYGPGDTAAQVEDAPLDATVLGGLANAQLAAGVTLGSLLDLDQAAAAGVLQQYAAA
GPAGATGAAGAVSDSGAITVGQGGGQQTVIGLGSTIASIGADDALSDLSLRFGAISSTVT
STGTGTPTSDYDIASAEAVLTSPLVAQISSRLTTAVDGIAPGIAADIDVSAATGPLLEEI
LGENVLTSALRVGTPTVTTTANVDTAAVVQAALAEPLTNEDGTVSIDVSAGTITVDLDRI
QALNDRAAGTSVLTSALLSSVVDSAITDVFTDVLPNRLVDALRASTTVNVAVTAPLTTGL
LNANAGPLGVDVNLSLDRLLGGTTGTAPTVSLTRTALLPPLNATVDLALLTPLFDDLVTA
LIGANADTNLLPAVGTALTGVSTGVITALAPAFPVVDRVVRLTVNEQTPDAFVDGDGVDA
GSSSVTALRVRLLGNGGPTIDLARSTVRAVPAPAADDVTIASPTPAQVIELPAGETTVVV
PVTGTADPDAEVTLTVGGQTVGPQPVGPGNAYTLTPPALPAGTYTATVTQTIDGQAAGSE
TVTFTIAAAAADITITTPTADQVFLTTAADPTVDVPVEGAADARASVTVTIPGQTAQTEL
VGADGVYDVTFADLPVGTYTATATQSIDGVVRGTETVTFTVGAPAAGVTITAPENGDLIL
SAGAVPTADVPVTGAADPRASVTVTIPGQDPQTEHVGDDGIYDVLFADLPVGDYTATATQ
SIGGVASGTATVTFSVVAPAVAVVIDTPTDGQDITVPAGGTAVDVTVTGSADPRGSVLIA
VTGQTPVTQVVGDDGRFEATFPGLTAAGYTVTVTQTVFDAPAGSDTADFTVSIAGVDQVV
IETPGDGDFLPLPDGDTTVSVPVTGTADPDAAVTLTVGGTTTAPVDVDDDGDFTLATPAL
PAGTYTGTVTQTIGGVAVGTDTVTFTVGVPVDIGSPFDFQVFPLDGGATTRDVPISGTAD
PLGTVTVSILGLDPITTEVDAEGNYSVTFFGLERGSYEAIATQTIGGAPAGDATVEFDVG
VTGEEGIDSDAVAAVDVDGDGTDVTDGGVDADAVDADGAADAAGADASDAAGADATDAAG
ADATDATDAAGADATDAAGTDATDAAGTDATDAAGTDATDAAGTDATDAAGTDATDAAGA
DATDAAGTDATDAAGADATDPAGTDATDAAGTDVTDAAGTDATDAAGTDAADATDAAGTD
AADATDAADATDGSTDGGDAPTRAVVRFTELVRGSGSVQVVDAFGFIPGETLNATVFSTP
RPLTPMVADADGRATFMFEIGPDFELGDHRVEVVGVDSGMADEMITRFRVVGSTVPAGQP
GTPISGGYGGGILPVTGGDGDGMLLLGGIALLMMLTGAGAGAGAGAGALHRGRSRRA
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atggcactacacatgcccagccgcagaagcaggctggcgaccgcgacggccttcgggctc
gccgcggcgatcgtcgcgttcgggggcaccgcgcccgcgaacgccgcaccgggggacacg
gcggaggccgagggacgcttcctgaccctgacgaacgtcccgcaggtgatcgccctcgac
ggcgcatacgcctcgtacggcccgggtgacaccgccgcgcaggtggaggacgcgccgctg
gacgcgaccgtcctcggggggctcgcgaacgcgcagctcgccgccggtgtcacgctcggc
tcgctcctcgacctggaccaggcggcagcggccggcgtgctgcagcagtacgcggccgcg
ggaccggccggcgccacgggcgcggcgggagccgtgtcggacagcggcgccatcacggtc
ggccagggcggcgggcagcagacggtcatcggcctcggctcgaccatcgcctcgatcggc
gcggacgacgccctctccgacctctcgctgcgcttcggcgcgatctcctccaccgtcacg
tcgacgggcacggggacgccgacctcggactacgacatcgcctcggccgaggccgtgctc
acgagcccgctggtcgcccagatcagctcgcggctcacgacggccgtcgacggcatcgcc
cccggcatcgccgctgacatcgacgtctcggccgccacgggcccgctcctcgaggagatc
ctcggggagaacgtgctgacctcggccctccgggtcgggaccccgaccgtcacgaccacg
gcgaacgtggacacggccgccgtcgtgcaggccgcgctcgccgagcccctcacgaacgag
gacggcacggtctcgatcgacgtgtccgccggcaccatcacggtggacctcgaccggatc
caggcgctgaacgaccgcgccgccggcacctcggtcctgacctcggcgctcctctcgagc
gtcgtcgactcggcgatcacggacgtcttcacggacgtgctgccgaaccgcctcgtggac
gcgctccgcgcctccaccacggtgaacgtcgcggtcaccgcgccgctcacgacgggcctg
ctcaacgcgaacgccggcccgctcggcgtggacgtcaacctgtcgctcgaccgcctgctc
ggcggcacgaccggcacggcgcccactgtcagcctcacccgcaccgcgctgctgccgccg
ctgaacgcgacggtggacctcgcgctgctcacgccgctgttcgacgacctcgtcaccgcg
ttgatcggcgcgaacgcggacaccaacctgctgccggccgtcggcaccgccctcaccggc
gtcagcacgggcgtgatcaccgccctcgccccggccttcccggtcgtcgaccgggtggtg
cgcctcacggtcaacgagcagacgccggacgcgttcgtcgacggggacggcgtcgacgcc
ggttcctcctcggtgaccgccctccgcgtgcggctgctcgggaacggcgggccgaccatc
gacctggcccgctcgaccgtccgcgccgtcccggcccccgcggccgacgacgtgaccatc
gcgtcgccgacgcccgcccaggtgatcgagctgccggccggggagacgaccgtcgtcgtg
cccgtcaccggcaccgccgaccccgacgccgaggtcacgctgaccgtcggcggccagacg
gtcggaccgcagccggtcggacccgggaacgcctacacgctcacccctcccgccctcccg
gcgggcacctacaccgcgaccgtcacccagacgatcgacgggcaggccgcgggctccgag
acggtgaccttcaccatcgccgcggccgccgcggacatcacgatcacgacgcccaccgcg
gaccaggtcttcctgaccaccgcggcggacccgacggtcgacgtgcccgtggagggcgcg
gcggacgcgcgcgcctccgtcaccgtgacgatccccggccagaccgcgcagaccgagctg
gtcggcgcggacggcgtctacgacgtgacgttcgccgacctgccggtcggcacctacacg
gcgaccgccacccagtcgatcgacggcgtggtccgcgggacggagacggtgaccttcacg
gtcggcgcccccgccgccggggtcaccatcaccgcgccggagaacggcgacctgatcctc
agcgccggcgccgtgccgacggccgacgtccccgtgaccggcgccgccgacccgcgcgcc
agcgtcacggtgacgatcccgggccaggacccgcagaccgagcacgtcggtgacgacggg
atctacgacgtgctgttcgccgacctcccggtcggcgactacacggcgaccgcgacccag
tccatcggcggcgtcgcctccgggacggcgaccgtgaccttctcggtcgtcgcacccgcc
gtcgccgtggtcatcgacaccccgaccgacgggcaggacatcacggtcccggccggcggc
accgcggtggacgtgaccgtcaccggcagcgcggacccgcgcggctccgtgctcatcgcg
gtgacgggccagacccccgtcacgcaggtggtcggggacgacggccgcttcgaggcgacg
ttcccgggcctcacggccgccgggtacaccgtcacggtgacgcagaccgtcttcgacgcc
cccgcgggctcggacacggccgacttcaccgtctccatcgccggcgtcgaccaggtcgtc
atcgagacccccggtgacggcgacttcctcccgctgccggacggggacaccaccgtctcc
gtcccggtgacgggcacggccgacccggacgccgccgtgaccctcacggtcggcggcacg
acgacggctcccgtcgacgtggacgacgatggcgacttcacgttggcgacgcccgccctg
cccgcgggcacctacacgggcaccgtcacccagacgatcggcggcgtcgccgtcggcacc
gacaccgtgaccttcacggtcggcgtgccggtggacatcggctcgccgttcgacttccag
gtcttcccgctcgacggcggggcgacgacccgggacgtgcccatctccggcacggccgac
ccgctggggacggtgacggtctcgatcctcgggctcgacccgatcaccacggaggtcgac
gcagagggcaactactcggtgacgttcttcggcctggagcgcggatcctacgaggcgatc
gcgacgcagaccatcggcggcgctcccgccggtgacgcgacggtcgagttcgacgtcggc
gtgaccggcgaggagggcatcgactccgacgccgtggccgcggtggacgtggacggcgac
ggcacggacgtcaccgacggcggcgtggacgcggacgcggtcgacgccgacggcgccgcg
gatgccgctggtgcggacgcgtccgacgccgctggcgcagacgcgaccgacgccgctggt
gcggatgcgacggacgcgaccgatgctgctggcgctgacgcgacggatgctgctggtacg
gacgcgacggatgctgccggtacggacgcgacggatgctgccggtacggacgcgacggac
gctgctggcacggacgcgaccgacgctgctggcacggacgcgacggacgctgctggcgcc
gatgcgacggatgctgctggcacggatgcgacggatgccgctggcgctgacgcgacggac
cctgctggtacggacgcgacggatgctgctggcaccgacgtgacggatgccgctggcact
gacgcgacggacgccgccggtaccgacgcggctgacgcgacggacgccgccggcacggac
gcggccgacgccacggacgccgccgacgcgaccgacggatccaccgacgggggcgacgcc
cccacccgggccgtcgtccgcttcacggagctcgtccgcgggagcgggtcggtgcaggtg
gtcgacgccttcgggttcatccccggtgagacgctcaacgcgacggtgttctccacgccg
aggccgctgacgccgatggtcgcggatgccgatggacgcgcgaccttcatgttcgagatc
ggcccggacttcgagctcggggaccaccgggtcgaggtggtcggtgtcgactcgggcatg
gccgacgagatgatcacgcggttccgggtcgtcggatccaccgtcccggctggccagccc
ggcacgccgatcagcggcggctacggcggcgggatcctcccggtcacaggcggcgacggc
gacgggatgctgctgctcggcggcatcgcgctcctgatgatgctgaccggtgccggtgcc
ggtgccggtgccggtgccggtgccctgcaccgcggccgcagccgacgggcgtga
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