Clavibacter nebraskensis: CMN_00963
Help
Entry
CMN_00963 CDS
T02530
Name
(GenBank) cofactor transferase, putative biotin/lipoate protein ligase
KO
K03524
BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:
6.3.4.15
]
Organism
cmc
Clavibacter nebraskensis
Pathway
cmc00780
Biotin metabolism
cmc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cmc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
CMN_00963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmc03000
]
CMN_00963
Enzymes [BR:
cmc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
CMN_00963
Transcription factors [BR:
cmc03000
]
Prokaryotic type
Helix-turn-helix
Other families
CMN_00963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_C
BPL_LplA_LipB_2
Motif
Other DBs
NCBI-ProteinID:
CCE74918
UniProt:
M5B7H8
LinkDB
All DBs
Position
986596..987378
Genome browser
AA seq
260 aa
AA seq
DB search
MDLPLSRLAAPRLLALDRVGSTNDELSRRASADPAGWPDGSVVLTLDQTAGRGRRGRVWV
APPGRTLAVSVLCVPGRADLDPGWLPLVAGLALVATLRDVVPAPAEVTLKWPNDVHVDGR
KVSGILGELVAPGRMLVGTGLNLTLEEAELPTPTSTSLRLAGVPDPDVDAVLAAYLREFR
ARYLAWAEADGDARAAGLVDDLTRTCATIGRDVRVELPGGGELLGRATGVDDDGRLTVES
AGDPAVRSVAAGDVTHLRYQ
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggacctcccgctcagccgcctcgccgccccgcgcctcctcgccctcgaccgggtcgga
tccaccaacgacgagctctcccggcgggcgtccgcggatcccgccgggtggcccgacggg
tccgtcgtgctcaccctcgaccaaacggcgggacgcggccgtcgcggccgcgtctgggtg
gcgccgcccggccgcaccctcgcggtgagcgtgctctgcgtccccgggcgcgcggacctc
gaccccgggtggctgccgctcgtggccgggctcgcgctcgtcgcgaccctgcgcgacgtc
gtgccggcgcccgccgaggtgacgctcaagtggccgaacgacgtgcacgtggacggacgg
aaggtatcggggatcctcggcgagctggtcgcgcccggccgcatgctggtgggcacgggc
ctcaacctcacgctcgaggaggccgagctgccgacgcccacctcgacgtccctgcggctg
gccggcgtgccggatccggacgtggatgccgtcctggccgcctacctccgggagttccgc
gcccgctacctggcctgggcggaggccgacggcgacgcgcgcgccgcggggctcgtcgac
gatctgacgcgcacgtgcgccaccatcggccgcgacgtccgcgtcgagctgccgggcggc
ggcgagctcctcgggcgggccaccggggtcgacgacgacgggcggctcacggtggagtcc
gccggggatccggccgtgaggtctgtcgccgccggggacgtgacgcatctgcggtatcaa
tga
DBGET
integrated database retrieval system
