Clavibacter nebraskensis: CMN_01117
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Entry
CMN_01117 CDS
T02530
Name
(GenBank) transcriptional regulator, LacI family
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
cmc
Clavibacter nebraskensis
Brite
KEGG Orthology (KO) [BR:
cmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmc03000
]
CMN_01117
Transcription factors [BR:
cmc03000
]
Prokaryotic type
Helix-turn-helix
LacI family
CMN_01117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_Crp_2
HTH_31
Trp_repressor
HTH_3
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
CCE75069
UniProt:
A0AAI8ZHI6
LinkDB
All DBs
Position
1145990..1147018
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AA seq
342 aa
AA seq
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MTQKRRPPTTQRMIAELAGVSITTVSRVLNSREEHPGRWAGPETVAAILDIAERSGYRRN
PHAASLRTSRSDLVGVLVPRLQDYVLATVYEGIDEAATERRISTFVTNSLDRPDLQRVRT
RSMLDRRVDGMIFGDAHLDDPLLDELAEEGVPFVLVSRRRGDHVAVTCDDVTGGRLAAEH
LIAQGRTRPAVLAGMSFASTAVDRTRGFLEAYAEAGMPVPPERVIQRGFDAAAGREATEA
VLRDGHAPDALFATNDFAAIGAMGALRDAGLSVPDDVALVGYNDTALAASGSIGLTSVRS
PVHEMGRLALETLLALVDGRDAASRMLEPTLVARASTGRHPA
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
gtgacccagaagcgccggccgcccaccacgcagcgcatgatcgccgagctcgccggcgtc
agcatcacgaccgtctcccgcgtgctcaactcccgcgaggagcaccccgggcggtgggcc
gggcccgagaccgtcgccgccatcctcgacatcgccgagcgcagcggctaccggcggaat
ccgcacgccgcgagcctgcgcacctcccgctccgacctcgtcggcgtcctcgtcccgcgc
ctccaggactacgtgctcgccaccgtctacgagggcatcgacgaggcggccaccgagcgc
cgcatctccaccttcgtcacgaacagcctcgaccggccggacctccagcgcgtccgcacg
cgcagcatgctcgaccgccgggtcgacggcatgatcttcggcgacgcgcacctcgacgac
ccgctgctcgacgagctcgcggaggagggcgtgcccttcgtcctcgtctcgcgccgccgg
ggtgaccacgtggccgtcacgtgcgacgacgtgacgggcggccggctcgcggccgagcac
ctcatcgcgcaggggcgcacccggccggccgtgctcgcgggcatgtccttcgcgtccacc
gcggtcgaccgcacgcgcggcttcctcgaggcgtacgccgaggccgggatgcccgtgccg
cccgagcgcgtgatccagcggggcttcgacgcggcggcgggccgggaggcgaccgaggcg
gtgctccgcgacgggcatgcgccggacgcgctcttcgcgaccaacgacttcgcggcgatc
ggcgcgatgggggcgctgcgcgacgcgggcctgtccgtgcccgacgacgtcgcgctcgtc
ggctacaacgacaccgcgctcgcggcatcgggatccatcgggctcacgagcgtgcgctcg
cccgtgcacgagatgggccggctcgcgctggagacgctcctcgcgctcgtcgacggccgg
gacgccgcctcccggatgctcgagccgacgctcgtcgcgcgcgcgtcgaccgggcggcac
ccggcctga
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