Clavibacter nebraskensis: CMN_01144
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Entry
CMN_01144 CDS
T02530
Name
(GenBank) transcriptional regulator, AsnC family
KO
K03718
Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
Organism
cmc
Clavibacter nebraskensis
Brite
KEGG Orthology (KO) [BR:
cmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmc03000
]
CMN_01144
Transcription factors [BR:
cmc03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
CMN_01144
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_AsnC-type
AsnC_trans_reg_3
HTH_24
NirdL-like_HTH
HTH_20
HTH_11
Sigma70_r4
Sigma70_r4_2
DUF7343
HTH_28
HTH_5
LexA_DNA_bind
NapD
MarR_2
HTH_IclR
HTH_53
HTH_23
Xre-like-HTH
TrmB
Motif
Other DBs
NCBI-ProteinID:
CCE75096
UniProt:
A0AAI8ZHJ1
LinkDB
All DBs
Position
complement(1173112..1173591)
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AA seq
159 aa
AA seq
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MSTPQRPSARGLPIDAISRSIVDQLREDGRRSYAEIGKAVGLSEAAVRQRVQKLTDAGVI
RIVALTDPQQLGLTRQAMIGVTVSGDVRVVADALADIPAVDYVVMTAGTFDLLAEVVCED
DEELVELLNARIRALDGVVSTETFVYLKVHTQDGHGRSR
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgccgcagcgcccctccgcccgcgggctccccatcgacgccatctcccgctcc
atcgtcgaccagctgcgggaggacgggcgccggtcgtacgccgagatcggcaaggccgtg
ggcctcagcgaggccgccgtccggcagcgcgtgcagaagctcaccgacgcgggcgtgatc
cgcatcgtcgcgctcaccgacccgcagcagctcggcctcacccgccaggccatgatcggc
gtcaccgtgagcggcgacgtgcgcgtggtcgccgacgccctcgcggacatcccggcggtc
gactacgtcgtgatgacggccggcacgttcgacctgctcgccgaggtggtctgcgaggac
gacgaggagctcgtcgagctgctcaacgcccggatccgggcgctggacggcgtcgtgagc
acggagacgttcgtctacctgaaggtccacacgcaggacgggcacgggcgctcgcggtga
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