Clavibacter nebraskensis: CMN_01162
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Entry
CMN_01162 CDS
T02530
Symbol
rhlE
Name
(GenBank) ATP-dependant RNA helicase
Organism
cmc
Clavibacter nebraskensis
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Paralog
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Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
P-loop_SecA
Cas3-like_C_2
HEM4
CMS1
Motif
Other DBs
NCBI-ProteinID:
CCE75114
UniProt:
A0AAI8ZHL9
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Position
complement(1189633..1191165)
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AA seq
510 aa
AA seq
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MTFTELNIDEDMVQALADHGILEPFPIQEQTIPLALSGQDIIGQAKTGTGKTFGFGLPLI
QRLGLTPEPGVQALVVVPTRELAVQVTEDLQIATAHRATTVVSIYGGKAYEGQIEQLKAG
AQIVVGTPGRLLDLVGQRLLSLQGVREMVLDEADKMLDLGFLSDIEKLFAQTPAVRHTML
FSATMPGPIVALARRFMTKPIHIRATDPDEGLMQANIRHLVYRAHNMDKDEVIGRILQAE
GRGKTVIFTRTKRAAARLVEELNDRGFNAAAVHGDLNQEQRERAMAAFKAGKKDILIATD
VAARGIDVLDVTHVINHTIPEDDKAYLHRVGRTGRAGKTGIAVTFVDWDDLHKWALINRA
LEFGQPEPTETYSSSPHLYTDLDIPAGSKGRLRATPTVNPDGTPRERPGSRGTDSGRDGG
RGGRDGGRGGSRDGGRSGGGERSGGDRDRSRSRSTSTASATASADATTTIGSEQPNTAGG
HDAPHADGQTRPRSRNRRRRSGGDRPTATS
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
gtgactttcaccgaactgaacatcgacgaggacatggtgcaggcgctggccgaccacggg
atcctcgaacccttccccatccaggagcagaccatccccctggccctctccggccaggac
atcatcggccaggccaagacgggcaccggcaagaccttcggcttcggcctcccgctcatc
cagcggctcggcctcacccccgagcccggcgtgcaggccctcgtggtcgtgccgacgcgc
gagctcgccgtccaggtcaccgaggacctccagatcgccaccgcgcaccgcgccaccacc
gtcgtctccatctacggcggcaaggcgtacgagggccagatcgagcagctcaaggccggc
gcgcagatcgtcgtcggcacgccgggccgcctcctcgacctcgtgggccagcgcctgctc
tcgctccagggcgtgcgtgagatggtgctcgacgaggccgacaagatgctcgacctcggt
ttcctctcggacatcgagaagctgttcgcgcagaccccggccgtgcgccacaccatgctg
ttctcggccaccatgccgggcccgatcgtcgcgctcgcccgccgcttcatgacgaagccg
atccacatccgcgcgacggaccccgacgagggcctcatgcaggcgaacatccgccacctc
gtctaccgggcgcacaacatggacaaggacgaggtcatcggccgcatcctccaggccgag
ggccgcggcaagaccgtgatcttcacgcgcaccaagcgcgccgccgcccgcctcgtcgag
gagctcaacgaccgcggcttcaacgccgccgccgtgcacggcgacctcaaccaggagcag
cgcgagcgcgccatggccgcgttcaaggccggcaagaaggacatcctcatcgccaccgac
gtggcggcgcgcggcatcgacgtgctcgacgtcacccacgtgatcaaccacaccatcccc
gaggacgacaaggcgtacctgcaccgcgtcggccgcacgggccgcgcgggcaagaccggc
atagcggtcacgttcgtcgactgggacgacctgcacaagtgggcgctcatcaaccgcgcc
ctcgagttcggccagccggagccgacggagacgtactcgtcctcgccgcacctctacacc
gacctcgacatcccggccggctccaagggccgcctccgcgcgaccccgacggtcaacccc
gacggcaccccccgggagcgtccgggaagccgcggcaccgactcgggtcgcgacggcgga
cgcggcgggcgtgacggcggccgcggcggcagccgggacggcggccgctccggcggcggc
gagcgctccggcggtgaccgcgaccgctcgcgcagccgcagcacgtcgaccgcgtcggcc
accgcatccgcggacgcgacaacgaccatcggcagcgagcagccgaacacggcgggcggc
cacgacgcgccccacgccgacggccagacgcgtccgcgctcgcgcaaccgccgccgtcgc
tccggcggcgaccgcccgacggcgacgtcctag
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