KEGG   Clavibacter nebraskensis: CMN_01167
Entry
CMN_01167         CDS       T02530                                 
Symbol
uvrD2
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
cmc  Clavibacter nebraskensis
Pathway
cmc03420  Nucleotide excision repair
cmc03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cmc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CMN_01167 (uvrD2)
   03430 Mismatch repair
    CMN_01167 (uvrD2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cmc03400]
    CMN_01167 (uvrD2)
Enzymes [BR:cmc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CMN_01167 (uvrD2)
DNA repair and recombination proteins [BR:cmc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CMN_01167 (uvrD2)
   MMR (mismatch excision repair)
    Other MMR factors
     CMN_01167 (uvrD2)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PDDEXK_1 UvrD_C_2 AAA_30 Card1_endonuc
Other DBs
NCBI-ProteinID: CCE75119
UniProt: A0AAI9EK35
LinkDB
Position
1196066..1199350
AA seq 1094 aa
MSGVGRAGDGTVGVEASGPGEGGMISAQRIAETLGLPSPTEQQRRVIESPLEPGLVVAGA
GSGKTETMASRVVWLLANGHVGVEEILGLTFTRKAAGELGVRIRARIEQLQQAGLAAVPA
DAFATPTVQTYNAFANGIFRDSATLIGREAESVVLTEASAWQLARRLVVESTDPRLLELG
RGVDPITQAVISLSRAMSENVADPAEVVRLAGSFTGLAELPFGSARIRKAPAADAVAAVG
ALPPLVDLAVRFQEEKTRRGLVEYSDQVAFALAICERVPQVVAEHRKRFRVVLLDEYQDT
SVVQTRLLSTLFGGTPVMAVGDPHQSIYGWRGASAANLARFGADFAPAGAAAVPVYALST
SWRNPGVVRGAANRIVEPLTAASRIPVARLEPRADAGDGRLDVAYEETIADEAASVATWF
ADRLRQTGSDGRPRSAAMLCRSLKTIEPFTTALADRGVPFRVLGLGGLLDQPAVVDLVCV
LRVLHDPTAGSELVRLLTGARWRVGTKDVHALSRVASWLMSRDHAQKPLADEVRDGLRAS
VVPDEVGSVVDALDFVVGARDGHTALAGFSVEGLVRLRAAGRQLQVLRSRVGLDLVDLVT
VVQQELLLDIEVAANETDPLGRASLEAFTEQVAGYLQGDSAGTLGPFLAWLAEAERRDNL
APRTEEPEPGTVQILTIHGSKGLEWDVVAVPRMVEGELPGTLREKRGWVAFGALPFEFRG
DSAELPSLAWRGVETQKEFAEAMEAFGDELEERNAAEQRRLAYVAITRTRSDLLLTGSFW
STQQKPRGPGAFLREIQQVGLIAAGALPEAPELEENPLEPGSARVAWPLPPLGPREARVR
AAAEAVAVADPDAETVWTRDIDLLLAERDARARDAELVDLPTRIPASRFKDFVSDPAGVA
ARLRRPMPERPYRQTRLGTLFHGWVEARYGPAGTADVIDASGVELDADPTEPPVETEDLD
RLRAIFEASEWAARKPEEVEVEIHMELAGQVVICKIDAVFLIDGRYRVVDWKTGRTPKDA
ADLELKQLQLALYRLAFAKWRGIDPDLIDAEFYFVAEDRSLKPERLYSEEDLVALWSGAR
TPDASRAPSGETVG
NT seq 3285 nt   +upstreamnt  +downstreamnt
atgagcggcgtgggcagggccggcgacggcacggtcggcgtcgaggcgtccggcccgggc
gagggcggcatgatcagcgcccagcgcatcgccgagacgctcggcctgccgagccccacc
gagcagcagcggcgcgtgatcgagtcgccgctcgagcccggcctcgtcgtcgcgggcgcc
ggcagcggcaagaccgagaccatggcgagccgcgtcgtctggctgctcgccaacgggcac
gtgggcgtcgaggagatcctcggcctcaccttcacgcgcaaggccgcgggcgagctcggg
gtgcggatccgcgcccgcatcgagcagcttcagcaggccgggctcgccgccgtccccgcg
gacgcgttcgcgacgcccaccgttcagacctacaacgcgttcgcgaacggcatcttccgc
gacagcgccacgctcatcggccgcgaggcggagtcggtcgtgctcacggaggcgtccgcg
tggcagctcgcgcgccggctcgtcgtcgagagcaccgatccgcgcctgctcgagctcggg
cgcggggtggatcccatcacgcaggccgtcatctccctcagccgcgcgatgagcgagaac
gtcgccgatccggccgaggtcgtgcgcctcgccgggtcgttcacgggcctcgcggagctg
ccgttcggttccgcgcgcatcaggaaggcccccgcggccgacgcggtcgccgccgtcggc
gcgctgccgccgctcgtcgacctcgccgtgcggttccaggaggagaagacccggcgcggg
ctcgtggagtacagcgaccaggtcgccttcgcgctcgccatctgcgagcgcgtgccgcag
gtcgtcgccgagcaccggaagcgcttccgcgtggtgctgctcgacgagtaccaggacacc
tcggtcgtgcagacccggctcctctcgacgctcttcggcggcacgcccgtcatggccgtg
ggggacccgcaccagtccatctacggctggcgcggcgcgagcgcggcgaacctcgcgcgc
ttcggcgccgacttcgcgccggccggcgccgccgccgtgcccgtctacgcgctctccacc
agctggcggaacccgggcgtggtgcgcggcgccgcgaaccgcatcgtcgagccgctcacc
gccgcgtcgcggatccccgtggcgcgactcgagccccgggccgacgcgggcgacggccgc
ctcgacgtcgcctacgaggagaccatcgcggacgaggccgcgagcgtcgccacgtggttc
gccgaccggctgcggcagaccggatccgacggccgcccccgctcggccgcgatgctgtgc
cgctcgctcaagaccatcgagccgttcacgacggcgctcgccgaccggggcgtgccgttc
cgcgtgctcggcctcggcggcctcctcgaccagcccgccgtcgtcgacctcgtgtgcgtc
ctccgcgtgctgcacgaccccaccgcgggcagcgagctcgtgcgcctcctcacgggcgcg
cgctggcgcgtcggcacgaaggacgtgcacgcgctgtcccgcgtcgcgtcgtggctgatg
tcccgcgaccacgcgcagaagccgctcgccgacgaggtgcgcgacggcctccgggcctcc
gtcgttcccgacgaggtggggtcggtcgtcgacgcgctcgacttcgtcgtcggcgcccgc
gacggccacaccgcgctcgccggcttcagcgtggagggcctcgtgcgcctccgtgccgcc
ggccgtcagctgcaggtgctgcgctcccgcgtcgggctcgacctggtcgacctcgtcacg
gtcgtccagcaggagctgctgctcgacatcgaggtcgccgcgaacgagacggatccgctc
ggccgcgcgagcctggaggccttcaccgagcaggtggccggctacctccagggcgactcc
gccggcacgctcggcccgttcctcgcctggctcgccgaggccgagcggcgcgacaacctc
gcgccgcgcaccgaggagccggagcccggcaccgtgcagatcctcacgatccacggctcg
aagggcctcgagtgggacgtcgtcgcggtgccgcgcatggtcgagggcgagctgcccggc
acgctccgggagaagaggggctgggtcgcgttcggcgccctgccgttcgagttccgcggc
gactccgccgagctgccgtcgctcgcgtggcgcggcgtggagacgcagaaggagttcgcc
gaagccatggaggcgttcggtgacgagctcgaggagcgcaacgccgccgagcagcggcgc
ctcgcgtacgtcgccatcacgcgcacgcggtccgacctgctgctcaccggctcgttctgg
tccacgcagcagaagccgcgggggcccggggcgttcctccgggagatccagcaggtgggc
ctcatcgcggcgggcgcgctccccgaggcgcccgagctggaggagaacccgctcgaaccg
ggatccgcccgcgtcgcctggccgctcccgccgctcggcccgcgggaggcgcgcgtgcgt
gcggccgccgaggccgtcgcggtcgcggatcccgacgcggagaccgtgtggacccgcgac
atcgacctgctcctcgccgagcgcgacgcccgcgcgcgggacgccgagctcgtcgacctg
cccacgcgcatccccgcgtcgcgcttcaaggacttcgtgagcgaccccgcgggcgtcgcc
gcgcgcctgcgccgcccgatgcccgagcgcccctaccggcagacgcggctcggcacgctc
ttccacggctgggtcgaggcgcggtacggccccgcgggcacggccgacgtcatcgacgcg
tccggcgtggagctcgacgcggatccgaccgagccgcccgtggagacggaggacctcgat
cgtctccgcgcgatcttcgaggcgagcgaatgggcggccaggaagccggaggaggtcgag
gtcgagatccacatggagctcgccggccaggtcgtcatctgcaagatcgacgcggtgttc
ctcatcgacggccgctaccgcgtcgtggactggaagaccggccgcaccccgaaggacgcg
gccgacctcgagctcaagcagctccagctcgccctgtaccgcctcgcgtttgcgaagtgg
cggggcatcgaccccgacctcatcgacgccgagttctacttcgtcgccgaggaccggtcg
ctgaagcccgagcggctctactccgaggaggacctcgtggcgctctggtcgggcgcgcgc
acgccggacgcgtcgcgcgcaccgtcgggggagaccgtgggctga

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