Clavibacter nebraskensis: CMN_01182
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Entry
CMN_01182 CDS
T02530
Name
(GenBank) conserved hypothetical protein
Organism
cmc
Clavibacter nebraskensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA14
RHS_repeat
GLEYA
Ntox21
Motif
Other DBs
NCBI-ProteinID:
CCE75134
UniProt:
A0AAI9EK41
LinkDB
All DBs
Position
1217414..1224337
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AA seq
2307 aa
AA seq
DB search
MPPQRGRVRRCGANARACGKPADSCRSLTLFSAPLPLSGRGCGCLIRLLEREHSDASCTP
SHSTAVIVALALALALVAEIFVALPAEAATTPTRPVASVPALTSDDVDVATPTIPSGSVD
APAPAYAQAPADPSAPAADASAVSPSSLSASAVARPRRAASASQLQDSAQLVSQSKFQDT
YANDDGTESAVLSQTPLNVQDTKGDWVPVNTDVTVRSSGAGVVPDHPLAPRFADSASDAG
VLTLHHDGHVLRYTLDGAADSPLERPSADEVQYRDVFPRTDLHYAVTAGQVKEELILAAP
PVPAAPSYTWHVSAAGLHAAQDADGSILFTDETGSVVFGIPAPRMYDSSGIPDVQEPADA
PVATTLTADGRGWTIRMTPDPAWLASPERAYPVHVDPSSVASWSNDQHAYKSDGTRLTDG
TVRIGNARDHGDKYWRTVEHFDYEQLFGKQVLSARIDGSYYNGGTRALFGGSISAATSFS
YNGVGDRLSQFAMSDNGSAQDDRLTDEIAKYVRDGSRGAYLIIGGDERPGVYTYKSIAVA
LVVTYKDMPTAGPAIAPSPADGARGPVMPTLAISGTDPEGTGLQYFYRISAGDDPEVAPV
WESGWGAQQVKVPFGALKPGTRYHWKGYVKDGYDGVHGTSTLGISSTWSFTTNTPAMTAQ
AGSAPVDGSVITTTSPTLTAPTISDPDGDPVKYRFQIASGADGTTGAVATSGWQAGTTWT
MPTNSLQDGGRYTWSVRASDGYDEPPVTWTDKIRVDLRVGDAGPAPTDTAGPVSVNLANG
NIGLRFASPTVQTVGGSMGLGFSYNSMQAGSGGLLGRYYDGAAPLGDGDACHADAGTLAT
TRTDPSISFDWGDGSPAPGVDADDFSAKWTGFLHVPTTGTYTFGMTRDDGGCVRVGGSTV
YSGWRDDHVAQDTTGSTPTALTQGTPVPLEVDYFEHAGEAGVSLWVTDPTGAQYVVPADW
FTRTVDTLPAGWSSTTALEGDAGDWSRAQVTDSAVILTDSSGTAHTYTRTAGDGSGTGYT
APTGEHDRVSLDQSRQVVVTGDDGTITTFDPSGRVQGVTGPGDALKRATPLSTRRPGTGL
VDRVSDPLSALGTPPETYGREVRFAYAGDTAASVGLDAKDTDSTGSACPVAAGFAAPPAD
MLCRIVYPGHVAGATDTTRLSYDAHGNLVRITDPGDEVTDLAYDGGRLTAVRDALADDWL
AADARRTADANVATTIAYDASGRATTVTLPAPDGVTAAKRPTKTYVYGSGTTSIDVPALG
LPAGTHASTVTYDDAWRQTSITGPSGLTASSEWNQKDLPLASVDAQGRKSTTIYDAQDRP
TDSYGPAPASCFGSDRVPTAACAATTAHSSTGYDGGLHGLDAVWYDNGRLAGAPRAYGLG
VGNADGSVDQDWGSGSPAAAGDGFPSDGFSLRLTGLVTAPQDGDYTFATKADDGTQLFLD
DIPLIDAWGANPGTEVRANHAVHLAAGQTARIRLQYNEGQGNAALKLEWQIGNAATVVVP
GSALTPDYGLQTSVTAADQAPTGVAGISASQISSATSVTQYDEPWLGIATASVVDPKGLA
LTHSTTHEARGSGYLRRLTRTLPAQANVATTTAYYGPTETIASAWGASGKVCGVDSSTPQ
YGGTKTSTGAKPASGDAIVTSFVYDVMGRAVGSKRSGDADWSCTSYDARGRATSSTTAAF
GSVAARTEKTDYAVGGDPLTGAVSDGAVTGSTSGGTVTTTANLLGQALKYTDVWGTVTTM
SYDSAGRVTSTVATPPSGAAHTTSYEYDIDSRVDVMRVDGKVVADPSYAKGELTGITYPS
GTTGAGNGSSLSEITRNGAGAVTGVGWSFPGKQTAVTDRVVRSQAGDVLQDTTSDGSTSN
DSTYSYDAAGRLVTAVIPHHRLTYGFDALAGSAACTQAGAVAAAGRNGNRTSSSDVLDGG
TPTTVASCYDGADRLIGTTVANAPADASPVNRSLTATQLAYDAHGNTVQLADETLSYDGG
DRHTATKLADGSSVTYLRDATDRIVQRTETTAAGVKTVTRYGFTGSGDAPDFVLNVSSAA
TEWDLPLPGGVTAEFRTGSAVWSYPSIHGDILVTADQAGARAPGLAVYDPFGQVEDPKTG
VLGTVTANQSGPDTQQGNADYGWLGQHQKLSEHLGGIATVEMGARQYVAALGRFLQVDPV
EGGTDDDYAYPNDPVNAVDLTGQWRGGIFASIISWFHLMKPPEYGPGGAGGGSRGGFPSS
GEGEGGGGARERGPRENELRGASAGKARSQNFSNANAAAVAKKLGFVKTNYRSDGRAVFT
DGRRFITRDQGSRNEQGVHKGGVLEDG
NT seq
6924 nt
NT seq
+upstream
nt +downstream
nt
gtgcccccgcaacgggggcgcgtccgtcgatgtggcgccaacgcgagagcctgtggaaag
ccagccgattcttgtcgatctctgaccctattctcagctccgctaccgctcagtggtcgc
ggatgcgggtgcctgatccgtctgctcgaaagggagcactcggatgcgtcttgcacgccg
tctcactccaccgccgtcatcgtcgccctggccctggccctggccctggtcgcggagatc
ttcgtcgccctgcccgccgaggccgcgaccacgccgacccggcccgtcgcctccgtgccg
gcgctcacgtccgacgacgtcgacgtcgccacgccgacgatccccagcggctcggtcgac
gcccccgctcccgcctacgcccaggctcccgccgacccgagcgcgccggccgccgacgcc
tcggccgtctcgccctcctcgctgtcggcctccgccgtcgcgcgcccccggcgggcggca
tcggcgagccagctgcaggactcggcccagctcgtgtcccagtcgaagttccaggacacc
tacgccaacgacgacggcaccgagtcggcggtgctctcgcagacgcccctcaacgtgcag
gacacgaagggggactgggtgccggtcaacacggacgtgaccgtccggtcgtccggggcg
ggtgtcgtccccgaccaccccctcgccccgcgcttcgccgactccgcgtccgacgcgggc
gtcctcacgctgcaccacgacgggcacgtgctgaggtacacgctcgacggcgccgcggac
agcccgctcgagcggcccagcgccgacgaggtgcagtaccgggacgtgttcccgcgcacc
gacctgcactacgcggtgacggccgggcaggtcaaggaggagctcatcctcgcggcgccg
ccggtgccggccgcgccctcgtacacctggcacgtgagcgcagccggtctgcacgcggcg
caggacgccgacggctccatcctcttcacggacgagaccggatccgtcgtgttcggcatc
cccgccccgcgcatgtacgactcgagcgggatcccggacgtgcaggagcccgccgacgcc
cccgtcgccacgacgctgaccgctgacggacgcggctggaccatccggatgacgcccgat
ccggcgtggctcgcgagccccgaacgcgcctacccggtgcacgtggacccgtcgtccgtc
gcgtcctggtcgaacgaccagcacgcgtacaagtccgacggcacccggctcaccgacggc
accgtccgcatcggcaacgcgcgggaccacggcgacaagtactggcgcacggtcgagcac
ttcgactacgagcagctgttcggcaagcaggtcctcagcgcccgcatcgacggctcgtac
tacaacggcgggaccagagcgctcttcgggggatccatcagcgccgccacgtcgttctcc
tacaacggggtcggggatcgcctcagccagttcgccatgtccgacaacggctccgcgcag
gacgaccggctcaccgacgagatcgcgaagtacgtgcgcgacggctcgcgcggggcgtac
ctcatcatcggcggcgacgagcggcccggcgtctacacgtacaagtcgatcgcggtcgcg
ctcgtcgtgacctacaaggacatgcccaccgcgggcccggccatcgcgccctctcccgcc
gacggagcacgcggtcccgtgatgcccacgctcgcgatctcgggcacggacccggagggc
accgggctgcagtacttctaccgcatcagcgccggggacgatcccgaggtggccccggtg
tgggagtcgggctggggcgcccagcaggtgaaggtgccgttcggcgcgttgaagcccggt
acgaggtaccactggaagggctacgtcaaggacgggtacgacggcgtgcacggcacctcc
acgctcggcatctcctccacgtggagcttcaccacgaacacgccggccatgacggcgcag
gccggttccgcgcccgtcgacgggtccgtcatcaccacgacgagcccgaccctcacggcg
ccgaccatctccgatcccgacggcgaccccgtcaagtaccggttccagatcgcctccggg
gccgacggcaccacgggcgccgtcgccacgtccggctggcaggcgggcacgacgtggacg
atgccgacgaactcgctgcaggacggcggccgctacacgtggtcggtgcgcgcgtccgac
gggtacgacgagccgccggtgacgtggacggacaagatccgggtcgacctccgcgtcggc
gacgccggacccgccccgacggacaccgcgggtcccgtcagcgtgaacctcgcgaacggc
aacatcgggctgcgcttcgcgtcgccgacggtgcagaccgtgggcggcagcatgggcctg
ggcttcagctacaactcgatgcaggccggctccggcgggctcctcggccgctactacgac
ggcgcggctcccctcggggacggcgacgcgtgccacgcggacgccggcacgctcgcgacc
acccgcaccgatccgtcgatctccttcgactggggagacggctcgcccgcccccggagtc
gacgcggacgacttctccgccaagtggactgggttcctgcacgtgccgaccaccggcacc
tacacgttcggcatgacccgggacgacggcggctgcgtgcgcgtcgggggatccaccgtg
tactccgggtggcgcgacgaccacgtggcgcaggacaccacggggtccacgccgaccgcc
ctcacgcagggcacgcccgtgccgctcgaggtcgactacttcgagcacgccggcgaggcc
ggggtctcgttgtgggtcacggacccgacgggcgcgcagtacgtggtgcccgccgactgg
ttcacccgcaccgtggacacgctccccgccggctggtcgtcgaccaccgcgctcgagggc
gacgccggcgactggtcgcgcgcccaggtcacggactccgcggtgatcctcaccgactcc
tccgggaccgcgcacacctacacgcgcaccgccggcgacggatccggcaccggttacacg
gcgccgacgggggagcacgaccgcgtctcgctcgaccagtcgcggcaggtcgtcgtgacg
ggcgacgacgggacgatcaccacgttcgacccgtcgggtcgcgtgcagggggtcaccggg
cccggggacgccctcaagcgggcgacgcccctgtcgacgcgtcgacccgggacgggcctc
gtcgaccgcgtgtccgacccgctctccgcgctcggcaccccgccggagacgtacggacgc
gaggtgcgcttcgcgtacgccggcgacaccgccgcgtccgtgggcctcgacgcgaaggac
acggactccacgggatcggcctgcccggtcgcggccgggttcgccgcgccgcccgccgac
atgctctgccgcatcgtctacccgggtcacgtcgcgggagcgacggacaccacgcgcctc
tcctacgacgcgcacggcaacctcgtgcgcatcacggacccgggggacgaggtcaccgac
ctcgcctacgacggcgggcgtctcaccgcggtgcgcgacgcgctcgcggacgactggctc
gcggcggacgcgcgacgcaccgccgacgcgaacgtcgccacgaccatcgcctacgacgcc
tccggccgcgcgaccaccgtcacgctcccggcgcccgacggcgtcacggccgcgaagcgc
cccacgaagacatacgtgtacggatccggcacgacctccatcgacgtgccggcgctcggc
ctgcccgccgggacgcacgcctcgaccgtgacgtacgacgacgcgtggcggcagacgagc
atcaccggtccgtcggggctcaccgcctcctccgagtggaaccagaaggacctgccgctg
gcgtccgtcgacgcgcagggtcggaagtcgaccacgatctacgacgcgcaggaccgcccg
acggactcctacggtccggcgcccgcgtcgtgcttcggctccgaccgcgttcccacggcg
gcctgcgccgcgaccacggcgcactcgtcgaccggctacgacggcggcctgcatgggctc
gacgcggtctggtacgacaacggccggctcgcgggagcacctcgggcctacgggttgggc
gtcggcaacgccgacggcagcgtcgaccaggactgggggagcggcagcccggcggcagcc
ggcgacggcttcccgtcggacggcttctcgctgcggctgacaggactcgtcacggctccg
caggacggcgactacaccttcgccaccaaggccgacgacggcacgcagctcttcctcgac
gacatcccgctgatcgacgcctggggtgccaaccccggcaccgaggtccgggcgaaccac
gccgtgcacctcgcagcggggcagacggcccgcatccggctgcagtacaacgagggccag
ggcaacgcggcgctcaagctcgagtggcagatcggcaatgccgccaccgtcgtggtgcca
ggcagcgcgctcacgcccgactacgggctgcagacgagcgtgacggcggccgaccaggcg
ccgacgggcgtggcgggcatcagcgcctcgcagatctcctcggccacgtcggtcacgcag
tacgacgagccgtggctcggcatcgcgaccgcgtcggtggtggatccgaagggcctggcg
ctcacgcactccaccacgcacgaggcgcgcggctccggatacctccggcgcctcacccgc
acgctgcccgcgcaggcgaacgtggccacgacgaccgcgtactacggaccgacggagacc
atcgcctccgcgtggggcgccagcggcaaggtctgcggcgtcgactcctccactccgcag
tacggggggacgaagaccagcaccggagcgaagcccgcgtcgggcgacgccatcgtcacc
tccttcgtctacgacgtgatggggcgtgcggtcggatcgaagcgctccggcgacgccgac
tggtcgtgcacctcctacgacgcccgggggcgggccacctcgagcaccacggccgccttc
gggtcggtcgcggcgcgcacggagaagacggactacgcggtcgggggtgatccgctcacc
ggagcggtctccgacggcgcggtcaccggatccacgagcggcggcaccgtcaccacgacg
gcgaacctcctcggccaggcgttgaagtacaccgacgtctgggggacggtcacgaccatg
tcgtacgactcggcgggccgggtcacctcgacggtcgcgacgccgccctccggcgcggcg
cacaccacctcctacgagtacgacatcgactcccgggtcgacgtgatgcgcgtggacggc
aaggtcgtcgccgatccctcatacgcgaagggcgagctcacggggatcacctatccgtcc
ggcacgaccggcgcgggcaacggctcgtcgctctccgagatcacgcggaacggcgcaggc
gcggtgaccggcgtcggctggtcgttcccgggcaagcagaccgccgtcaccgatcgggtc
gtccgctcgcaggcgggcgatgtcctgcaggacaccacgagtgacgggagcacgagcaac
gactcgacgtactcgtacgacgcagccggacgcctcgtcaccgcggtgatcccgcaccac
cgcctgacctacgggttcgacgcgcttgccggatccgccgcctgcacccaggccggcgcg
gtcgcggcggccgggcggaacggcaaccgcacctcctcatcggacgtgctcgacggcggg
accccgacgaccgtggcgtcctgctacgacggagcggaccggctcatcggcaccacggtg
gcgaacgcccccgcggacgcctccccggtgaaccgctcgctgaccgcgacccagctcgcc
tacgacgcgcacggcaacaccgtgcagctcgcggacgagaccctgtcgtacgacggcggg
gaccggcacacggccacgaagctggccgacggctcgtcggtgacgtacctgcgcgacgcg
acggatcgcatcgtgcagcggacggagacgaccgcggccggcgtgaagacggtcacccgg
tacggcttcacgggaagcggcgatgcgccggacttcgtgctaaacgtgtcgagcgcggcg
accgagtgggatctgccgctgccgggtggcgtgacggcggagttccgcaccgggtcggcc
gtgtggtcgtacccgagcatccacggcgacatcctcgtcacggcggaccaggccggggcg
cgtgcgccggggctcgcggtctacgacccgttcggtcaggtcgaggatccgaagacgggt
gtgctgggcacggtgacggcgaaccagtcgggtccggacacccagcagggcaacgcggac
tacgggtggctcggtcagcaccagaagctgtcggagcacctgggcggcatcgcgacggtg
gagatgggggcgcggcagtacgtcgcggcgctggggcggttcctgcaggtggatccggtc
gagggcgggacggatgacgactacgcgtatccgaacgacccggttaacgcggtggatctg
acaggtcagtggcgcggcgggatcttcgcgtccatcatcagctggttccacctcatgaag
ccgccggaatacgggcctggcggcgcgggtggcggaagtcgtggcgggttcccctcgtcg
ggggaaggcgaagggggagggggcgcacgcgagcgcggtccccgagagaatgagctgcgc
ggggcttctgctggcaaagcgaggtctcagaatttctcgaacgcgaatgcggcggccgtg
gcgaagaagctcggcttcgtcaagacgaattaccgttcagacggcagagcggtcttcacc
gacggcaggaggttcatcactcgcgatcagggctcgcggaatgaacaaggcgttcacaag
gggggggtactggaagatggctga
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